BAC Information

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BAC

Clone NameB6Ng01-245D18
Chromosome2 (Build37)
Map Location 81,402,106 - 81,505,284
singlet/doubletdoublet
Overlap geneLOC100040704
Upstream geneNckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324, LOC668027, LOC100040624, LOC100040655
Downstream geneZfp804a, LOC100041308, A130030D18Rik, EG624362, LOC433550, LOC269292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245D18.bB6Ng01-245D18.g
ACCGA054172GA054173
length8481,004
definitionB6Ng01-245D18.b B6Ng01-245D18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,402,106 - 81,402,919)(81,504,716 - 81,505,284)
sequence
gaattcaaacaggaactacagaggtaagtttcaccaacagaatacaagaa
agaaagagaatctcaggcattgaagatactgtagaaaaaaatggattcac
tggtcaaaaaaaatgttgaaattaaaattcccctacaaaacatctgggat
gctatgagaagacaaagcctaaaaataatagaaatagatgaaaaagaatc
gcacacaagtgctcagaaataatttcagcaaaatcttagaagaaaaaaaa
caatttaacctaaataaagggatgccaaaaagatacaagaatcataaagt
taaaaaaaaaatggaccatagaaaaatcccctctgtagcagaggatggcc
tagttggccaccaatggaaggagaggcccttggtcttttgaagatttaat
gccccagtacaagggaatgtcagggccaggaagcaggaatgggtgggttg
gggagcagggcatggggagagtataggggactttagggatagcatttgaa
atgtaaatgaagaaaatacctaataaaaaatgccttcactaaaagtgtta
tgtttacatttcaaatgttatccactttcctagttgcctttctgaaagtc
ccctatactgttctcctggagccagtgtctgtgttgatgtctatggccct
ttgccaataccccaaggtcatgaaggatatctgtggcctttattacagcc
tgaagccatgttgatgttcttggctattctgctgctaggggacatattga
tgtgagtaatctgtgctctcatctgttttccagtccaagctgtccttcaa
aggccttttctagatctaaaatccactgctgcctaggtgctgggtgtg

gaattctgtgttttatacagtaagaaatatgccaaaacatatgtattttt
atgcaaacagctaattccatcaggtaacatcatgttgaaaactctattat
aatatattggcatgaaaacttaattttatttatcttactctgcaaaactc
ttgatattgtttaggaaatcaaaaaacaaccaaaaattaattaatagcaa
tttagtctttaagttatttatggaagtgaatatcaattatattttaagtg
atatgtatgtgccattagtgaatgtttatattcaacaagtaaacatcttc
attcttcaataatgtaaaatagttgagactatgtttcttgaattggagaa
tagacaactattggttgcttaaaattgattctgtatcctgacactttgct
aaaatatttttatcatttctaaagtttttctgttggtaaatttttataag
ttttaatatcatcatctgaaaatagggacagttttaattctttccccatc
catataccttcagttgctttcgcatgctttattgctctagctagtacttt
gaacacagtattgaaaaggagtggagatagtgaacatttctttctagttt
ctggtatcagtgagattgtctcaagactttctcaatttaacatgatgttg
gctggggttttctcagtcacagcttttaaaatgttgtggtatgttccctc
tgttccctattttcctagaaaaatcatcatggaggtatattggattttgg
caatggcttttctcctccatctattgagatatgagaattttgtctttaag
atcatttatatggttgaatgacattcaatttgaatcatcacatagttcag
aataatactttacatatgcctgcatttggtttaataatatttcattgaga
atgcttactacaatgtccccaggaatactggtctatagctttcttgttat
atctctaccttagttttgtcactagaataatgacaactttgctagaataa
tttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_81402106_81402919
seq2: B6Ng01-245D18.b_79_893

seq1  CCAACAGAATACAAGAAAGAAAGAGAATCTCAGGCATTGAAGATACTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGAATACAAGAAAGAAAGAGAATCTCAGGCATTGAAGATACTGTA  50

seq1  GAAAAAAATGGATTCACTGGTCAAAAAAAATGTTGAAATTAAAATTCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATGGATTCACTGGTCAAAAAAAATGTTGAAATTAAAATTCCCC  100

seq1  TACAAAACATCTGGGATGCTATGAGAAGACAAAGCCTAAAAATAATAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACATCTGGGATGCTATGAGAAGACAAAGCCTAAAAATAATAGAA  150

seq1  ATAGATGAAAAAGAATCGCACACAAGTGCTCAGAAATAATTTCAGCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGAAAAAGAATCGCACACAAGTGCTCAGAAATAATTTCAGCAAAA  200

seq1  TCTTAGAAGAAAAAAAACAATTTAACCTAAATAAAGGGATGCCAAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAGAAAAAAAACAATTTAACCTAAATAAAGGGATGCCAAAAAGA  250

seq1  TACAAGAATCATAAAGTTAAAAAAAAAATGGACCATAGAAAAATCCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAATCATAAAGTTAAAAAAAAAATGGACCATAGAAAAATCCCCTC  300

seq1  TGTAGCAGAGGATGGCCTAGTTGGCCACCAATGGAAGGAGAGGCCCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAGAGGATGGCCTAGTTGGCCACCAATGGAAGGAGAGGCCCTTGG  350

seq1  TCTTTTGAAGATTTAATGCCCCAGTACAAGGGAATGTCAGGGCCAGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAAGATTTAATGCCCCAGTACAAGGGAATGTCAGGGCCAGGAAG  400

seq1  CAGGAATGGGTGGGTTGGGGAGCAGGGCATGGGGAGAGTATAGGGGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATGGGTGGGTTGGGGAGCAGGGCATGGGGAGAGTATAGGGGACTT  450

seq1  TAGGGATAGCATTTGAAATGTAAATGAAGAAAATACCTAATAAAAAATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATAGCATTTGAAATGTAAATGAAGAAAATACCTAATAAAAAATGC  500

seq1  CTTCACTAAAAGTGTTATGTTTACATTTCAAATGTTATCCACTTTCCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTAAAAGTGTTATGTTTACATTTCAAATGTTATCCACTTTCCTAG  550

seq1  TTGCCTTTCTGAAAGTCCCCTATACTGTTCTCCTGGAGCCAGTGTCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTTCTGAAAGTCCCCTATACTGTTCTCCTGGAGCCAGTGTCTGTG  600

seq1  TTGATGTCTATGGCCC-TTGCCAATA-CCCAAGGTCATGAAGGATATCTG  648
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  TTGATGTCTATGGCCCTTTGCCAATACCCCAAGGTCATGAAGGATATCTG  650

seq1  TGGCCTTTATTACAGCCTGAAGCCATGTTGATGTTCTTGGCTATTCTGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTTATTACAGCCTGAAGCCATGTTGATGTTCTTGGCTATTCTGCT  700

seq1  GCTAGGGGACATATTGATGTGAGTAATCTGTGCTCTCATCTGTTTTCCAA  748
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTAGGGGACATATTGATGTGAGTAATCTGTGCTCTCATCTGTTTTCC-A  749

seq1  GTCCAAGCTGT-CTTCAAAGGCCTTTTCTAGATCTAAGATCCACTGCTGC  797
      ||||||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  GTCCAAGCTGTCCTTCAAAGGCCTTTTCTAGATCTAAAATCCACTGCTGC  799

seq1  CTAGGTGCGGGGGTGTG  814
      ||||||||  |||||||
seq2  CTAGGTGC-TGGGTGTG  815


seq1: chr2_81504716_81505284
seq2: B6Ng01-245D18.g_65_633 (reverse)

seq1  CCTTTTCAATACTGTGTTCAAAGTACTAGCTAGAGCAATAAAGCATGCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCAATACTGTGTTCAAAGTACTAGCTAGAGCAATAAAGCATGCGA  50

seq1  AAGCAACTGAAGGTATATGGATGGGGAAAGAATTAAAACTGTCCCTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACTGAAGGTATATGGATGGGGAAAGAATTAAAACTGTCCCTATTT  100

seq1  TCAGATGATGATATTAAAACTTATAAAAATTTACCAACAGAAAAACTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGATGATATTAAAACTTATAAAAATTTACCAACAGAAAAACTTTA  150

seq1  GAAATGATAAAAATATTTTAGCAAAGTGTCAGGATACAGAATCAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGATAAAAATATTTTAGCAAAGTGTCAGGATACAGAATCAATTTTA  200

seq1  AGCAACCAATAGTTGTCTATTCTCCAATTCAAGAAACATAGTCTCAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCAATAGTTGTCTATTCTCCAATTCAAGAAACATAGTCTCAACTA  250

seq1  TTTTACATTATTGAAGAATGAAGATGTTTACTTGTTGAATATAAACATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATTATTGAAGAATGAAGATGTTTACTTGTTGAATATAAACATTC  300

seq1  ACTAATGGCACATACATATCACTTAAAATATAATTGATATTCACTTCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGGCACATACATATCACTTAAAATATAATTGATATTCACTTCCAT  350

seq1  AAATAACTTAAAGACTAAATTGCTATTAATTAATTTTTGGTTGTTTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTTAAAGACTAAATTGCTATTAATTAATTTTTGGTTGTTTTTTG  400

seq1  ATTTCCTAAACAATATCAAGAGTTTTGCAGAGTAAGATAAATAAAATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTAAACAATATCAAGAGTTTTGCAGAGTAAGATAAATAAAATTAA  450

seq1  GTTTTCATGCCAATATATTATAATAGAGTTTTCAACATGATGTTACCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATGCCAATATATTATAATAGAGTTTTCAACATGATGTTACCTGA  500

seq1  TGGAATTAGCTGTTTGCATAAAAATACATATGTTTTGGCATATTTCTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTAGCTGTTTGCATAAAAATACATATGTTTTGGCATATTTCTTAC  550

seq1  TGTATAAAACACAGAATTC  569
      |||||||||||||||||||
seq2  TGTATAAAACACAGAATTC  569


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