BAC Information

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BAC

Clone NameB6Ng01-248N20
Chromosome2 (Build37)
Map Location 88,541,766 - 88,697,791
singlet/doubletdoublet
Overlap geneOlfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204
Upstream geneOlfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196
Downstream geneOlfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248N20.bB6Ng01-248N20.g
ACCGA056833GA056834
length1,0381,075
definitionB6Ng01-248N20.b B6Ng01-248N20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(88,541,766 - 88,542,801)(88,696,754 - 88,697,791)
sequence
gaattcaaagagaattccttttattactttttaattttttattagctttt
ttcctcatttacatttccaatgctatctcaaatgtcccccatacaccccc
catgcccctacgcacccactcccactttttgaccctgacgttcccctgta
gtggggcatataaagtttgcaagtccaatgggcctctctttccagtgatg
gaggactaggctatcttttgatacatatgcagctagagacaagagctccg
gggtactggttagttcacattgttgttccacctatagtgttgcagttccc
tttagctccttgggtactttctctagctccttcattgggagccctgtaat
ccatccaataaagccaaattggttctgttctgatatacattttacatatg
aacaaatacagaaatgtcaggtttaactgatttatagaaactccttaaga
tgatgcaaatctaagcatggcatattttgcccaattccaatttactaatt
tctctctcatattttccataccaggaaaaaattctactcattttccctcc
ttaaaaaatgattagataatattacattgtttctgcattattaaagatat
aaaagtttataaatcttgattctgtgtgtcacatatgattcatctagatg
ttactatctcatagttagaagtttataaattatttggaattaataccaat
tttctaaagaatgcagtgttcttcattacacaagtgaaagagcatgaata
gttagtttgaaagtagtttcagtgtttcttcttagatgattcaacaacaa
caacaaaacaacctcaaaacacactctaggaataaataatttgaggtaac
tgtctggcatttaaatagaaagtataacttttatatttctctaagaatgt
aacagcatatgaaaagataactggtaacatgctatagtcactccagagtg
ctaatcaatcctggtggactgtcctgtttatttactctcatactgaagat
atggtagcatggtgatgtgttatctttgggaatattaa

gaattcataaatttctaatagacattcaataaagtcacttctatttgatt
ctcactggaacattaggaaatcccttatactggcccagagtcaccatgtg
tgttctgaaattcatcttcacacacaaaaaatgagagactggtatttcct
ctgcattattagaaggaatatttgacactaataatattgtatgcaggagt
ttggagaaaagtatatagtgatgcccagccctcacaattggggtcctaca
ctttcagaggagaggaagggtgatagggaagagactctgtaagtggggga
ggcaacatttcagatgtaaacaattttttaaaaggaaatctaaggtagct
acattgaaaattttctttaatttatcttcttatagtaaaggtgatgttat
ctacttataattaaagatattaactgaggaaatacacttatataaaacct
gaaagacatctagtatccatatttgttattattctgccattctcagtaaa
gtgactgaggacatgttataaaaatgattaaacatgaaaatatctccact
catgaatatgtcaacatcttttcaacataattattcttttttattagata
ttttctttatttacatttcaaatgttatccactttcctagtttcccccca
aaatcccctttccattcacccctcccttgctccccaacccacccactccc
actcctggccctggtattcccctatactggtgtatagaactttcacagga
ccaagggcctcttctcccattgatgaccaactaggacatcctctgctaca
tatacagctagaaccacaagtcctaccatgtgtttcctttgattgttggt
ttagtcccaaggggctctgggagtactggttagttcatattttatgttcc
ctcctatggggactgcaaaccccttcagcttctttggaatactttctcta
gcttccttcattgggggaccctgtgctccggcccaatggatgatatgatc
atttcattagatgctgagaaagccatttgacaaaatccaacaccattcat
gataaaaggtctttggaaagatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88541766_88542801
seq2: B6Ng01-248N20.b_47_1084

seq1  GAATTCAAAGAGAATTCCTTTTATTACTTTTTAATTTTTTATTAGCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGAGAATTCCTTTTATTACTTTTTAATTTTTTATTAGCTTTT  50

seq1  TTCCTCATTTACATTTCCAATGCTATCTCAAATGTCCCCCATACACCCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATTTACATTTCCAATGCTATCTCAAATGTCCCCCATACACCCCC  100

seq1  CATGCCCCTACGCACCCACTCCCACTTTTTGACCCTGACGTTCCCCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCCCTACGCACCCACTCCCACTTTTTGACCCTGACGTTCCCCTGTA  150

seq1  GTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATG  200

seq1  GAGGACTAGGCTATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTAGGCTATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCG  250

seq1  GGGTACTGGTTAGTTCACATTGTTGTTCCACCTATAGTGTTGCAGTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTGGTTAGTTCACATTGTTGTTCCACCTATAGTGTTGCAGTTCCC  300

seq1  TTTAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGAGCCCTGTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTCCTTGGGTACTTTCTCTAGCTCCTTCATTGGGAGCCCTGTAAT  350

seq1  CCATCCAATAAAGCCAAATTGGTTCTGTTCTGATATACATTTTACATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAATAAAGCCAAATTGGTTCTGTTCTGATATACATTTTACATATG  400

seq1  AACAAATACAGAAATGTCAGGTTTAACTGATTTATAGAAACTCCTTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATACAGAAATGTCAGGTTTAACTGATTTATAGAAACTCCTTAAGA  450

seq1  TGATGCAAATCTAAGCATGGCATATTTTGCCCAATTCCAATTTACTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCAAATCTAAGCATGGCATATTTTGCCCAATTCCAATTTACTAATT  500

seq1  TCTCTCTCATATTTTCCATACCAGGAAAAAATTCTACTCATTTTCCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCATATTTTCCATACCAGGAAAAAATTCTACTCATTTTCCCTCC  550

seq1  TTAAAAAATGATTAGATAATATTACATTGTTTCTGCATTATTAAAGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATGATTAGATAATATTACATTGTTTCTGCATTATTAAAGATAT  600

seq1  AAAAGTTTATAAATCTTGATTCTGTGTGTCACATATGATTCATCTAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTATAAATCTTGATTCTGTGTGTCACATATGATTCATCTAGATG  650

seq1  TTACTATCTCATAGTTAGAAGTTTATAAATTATTTGGAATTAATACCAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATCTCATAGTTAGAAGTTTATAAATTATTTGGAATTAATACCAAT  700

seq1  TTTCTAAAGAATGCAGTGTTCTTCATTACACAAGTGAAAGAGCATGAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAAGAATGCAGTGTTCTTCATTACACAAGTGAAAGAGCATGAATA  750

seq1  GTTAGTTTGAAAGTAGTTTCAGTGTTTCTTCTTAGATGATTCAACAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTTGAAAGTAGTTTCAGTGTTTCTTCTTAGATGATTCAACAACAA  800

seq1  CAACAAAACAACCTCAAAACACACTCTAGGAATAAATAATTTGAGGTAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAACAACCTCAAAACACACTCTAGGAATAAATAATTTGAGGTAAC  850

seq1  TGTCTGGCATTTAAATAGAAAGTATAACTTTTATATTTCTCTAAGAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGCATTTAAATAGAAAGTATAACTTTTATATTTCTCTAAGAATGT  900

seq1  AACAGCATATGAAAAGATAACTGGTAACATGCTATAGTCACTCCAGAGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCATATGAAAAGATAACTGGTAACATGCTATAGTCACTCCAGAGTG  950

seq1  CTAATCAATCCT-GTGGACTGTCCTGTTTATTTACTCTCATACTGAAGAT  999
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTAATCAATCCTGGTGGACTGTCCTGTTTATTTACTCTCATACTGAAGAT  1000

seq1  ATGGTAGCATGGTGATGTTGTTATCTT--GGGATATTAA  1036
      ||||||||||||||||| |||||||||  || |||||||
seq2  ATGGTAGCATGGTGATG-TGTTATCTTTGGGAATATTAA  1038


seq1: chr2_88696754_88697791
seq2: B6Ng01-248N20.g_92_1138 (reverse)

seq1  CTGATCTTT-CAAAGA-CTTTTATCATGAATGGGTGTTGGATTTTGTCAA  48
      ||||||||| |||||| |||||||||||||| ||||||||||||||||||
seq2  CTGATCTTTCCAAAGACCTTTTATCATGAAT-GGTGTTGGATTTTGTCAA  49

seq1  AT-GCTTTCTCAGCATCTAATGAAATGATCATTATCATCCATT-GGCCGG  96
      || |||||||||||||||||||||||||||| ||||||||||| ||||||
seq2  ATGGCTTTCTCAGCATCTAATGAAATGATCA-TATCATCCATTGGGCCGG  98

seq1  AGCACAGGGT-CCCCAATGAAGG-AGCTAGAGAAAGTAT--CCAAGGAGC  142
      |||||||||| |||||||||||| |||||||||||||||  | ||| |||
seq2  AGCACAGGGTCCCCCAATGAAGGAAGCTAGAGAAAGTATTCCAAAGAAGC  148

seq1  TGAAGGGGTTTGCAGT-CCCATAGGA-GGAACAT-AAATATGAACTAACC  189
      |||||||||||||||| ||||||||| ||||||| |||||||||||||||
seq2  TGAAGGGGTTTGCAGTCCCCATAGGAGGGAACATAAAATATGAACTAACC  198

seq1  AGTACTCCCAGAGCCCCTTGGGACTAAACCAACAATCAAAGGAAACACAT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCCCAGAGCCCCTTGGGACTAAACCAACAATCAAAGGAAACACAT  248

seq1  GGTAGGACTTGTGGTTCTAGCTGTATATGTAGCAGAGGATGTCCTAGTTG  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGACTTGTGGTTCTAGCTGTATATGTAGCAGAGGATGTCCTAGTTG  298

seq1  GTCATCAATGGGAGAAGAGGCCCTTGGTCCTGTGAAAGTTCTATACACCA  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAATGGGAGAAGAGGCCCTTGGTCCTGTGAAAGTTCTATACACCA  348

seq1  GTATAGGGGAATACCAGGGCCAGGAGTGGGAGTGGGTGGGTTGGGGAGCA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGGGGAATACCAGGGCCAGGAGTGGGAGTGGGTGGGTTGGGGAGCA  398

seq1  AGGGAGGGGTGAATGGAAAGGGGATTTTGGGGGGAAACTAGGAAAGTGGA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGGTGAATGGAAAGGGGATTTTGGGGGGAAACTAGGAAAGTGGA  448

seq1  TAACATTTGAAATGTAAATAAAGAAAATATCTAATAAAAAAGAATAATTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTGAAATGTAAATAAAGAAAATATCTAATAAAAAAGAATAATTA  498

seq1  TGTTGAAAAGATGTTGACATATTCATGAGTGGAGATATTTTCATGTTTAA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAAGATGTTGACATATTCATGAGTGGAGATATTTTCATGTTTAA  548

seq1  TCATTTTTATAACATGTCCTCAGTCACTTTACTGAGAATGGCAGAATAAT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTATAACATGTCCTCAGTCACTTTACTGAGAATGGCAGAATAAT  598

seq1  AACAAATATGGATACTAGATGTCTTTCAGGTTTTATATAAGTGTATTTCC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATATGGATACTAGATGTCTTTCAGGTTTTATATAAGTGTATTTCC  648

seq1  TCAGTTAATATCTTTAATTATAAGTAGATAACATCACCTTTACTATAAGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTAATATCTTTAATTATAAGTAGATAACATCACCTTTACTATAAGA  698

seq1  AGATAAATTAAAGAAAATTTTCAATGTAGCTACCTTAGATTTCCTTTTAA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAATTAAAGAAAATTTTCAATGTAGCTACCTTAGATTTCCTTTTAA  748

seq1  AAAATTGTTTACATCTGAAATGTTGCCTCCCCCACTTACAGAGTCTCTTC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTTTACATCTGAAATGTTGCCTCCCCCACTTACAGAGTCTCTTC  798

seq1  CCTATCACCCTTCCTCTCCTCTGAAAGTGTAGGACCCCAATTGTGAGGGC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCACCCTTCCTCTCCTCTGAAAGTGTAGGACCCCAATTGTGAGGGC  848

seq1  TGGGCATCACTATATACTTTTCTCCAAACTCCTGCATACAATATTATTAG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATCACTATATACTTTTCTCCAAACTCCTGCATACAATATTATTAG  898

seq1  TGTCAAATATTCCTTCTAATAATGCAGAGGAAATACCAGTCTCTCATTTT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATATTCCTTCTAATAATGCAGAGGAAATACCAGTCTCTCATTTT  948

seq1  TTGTGTGTGAAGATGAATTTCAGAACACACATGGTGACTCTGGGCCAGTA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTGAAGATGAATTTCAGAACACACATGGTGACTCTGGGCCAGTA  998

seq1  TAAGGGATTTCCTAATGTTCCAGTGAGAATCAAATAGAAGTGACTTTAT  1038
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGATTTCCTAATGTTCCAGTGAGAATCAAATAGAAGTGACTTTAT  1047


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