BAC Information

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BAC

Clone NameB6Ng01-249K22
Chromosome2 (Build37)
Map Location 157,273,674 - 157,486,508
singlet/doubletdoublet
Overlap geneSrc, Blcap, Nnat
Upstream geneEpb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2, LOC100043880, Ndrg3, LOC668943, Dsn1, 9830001H06Rik, Gm1332, Samhd1, Rbl1, LOC100043882, 4922505G16Rik, Rpn2, Ghrh, LOC100043678, Manbal
Downstream geneCtnnbl1, LOC100043681, Gm691, 2610036D13Rik, 2610304G08Rik, Tgm2, D630003M21Rik, Bpi, Lbp, 9430008C03Rik, A930034L06Rik, B230339M05Rik, LOC628935, BC054059, LOC545481, Slc32a1, Actr5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249K22.bB6Ng01-249K22.g
ACCGA057437GA057438
length1,037287
definitionB6Ng01-249K22.b B6Ng01-249K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,273,674 - 157,274,710)(157,486,222 - 157,486,508)
sequence
gaattcactagtgaagctatctgggcctgggcccttttaagggaagtttt
aagatgactaattcagggcctgcagagatgaatcagtggttagtaatact
tgcagctcctcctgaggaactgaatttgatttacagtacccatgttggga
gtcacatgacctgtaactctggctccaggtgatcggagactgtttttttg
ttttccaggcacagacatacacacacagaaaaatttactgatttaggacc
aacaagctggctcagaggataagggtgcttgctgccaagcttgatgacct
gagttcagtccccgggacccacatggtagaaggagagatttgaaccccac
aggtggtcttctggggggtgaaccttaaacccaagactccgtactcttgt
aatagattctcactatgtagctcaggctgccttccgggtcctccagcctc
agccaccagagtccagggatttcaggcatccttaccacagccggctcctc
taattcctacccgagtaacctgagctgctttttttgttgttgctgttgat
tggttctgctccgtcatggctggaatcacactttgtgtgatttgatttct
aaaggcattgagccctgttttctggcatagcatatggtctgacttagaca
gtgttcgtgcgcactgtgcacacttgaggagcatgtgggtctggtgttcc
tgggtggctgctctgcttccatttgccttttgtctgaggagttttgtagt
gagtaaggctccctcagtttgctttttccggtgaactgtctgtggttttg
tttttttttttatttttatcttacgtgagctctttatatattaaaaaccc
ttgtttatcatatgagttgcaattttttttttctggtttaaatttgttta
tcaagctaggcagacttttttttctttaggcaaggtctttttgtagttca
ggatggccctgattcactatcttcttccccctgctcttttttttttaaag
attattatagtatgtatattggatacaccggtcatgg
ctggagcaagctggctacctggactagctgtatagttgttctgcctcagt
gtacagtgtatctgcatatgcagagaggaccacaggcatgcaaatgtaaa
cacacatatgcatacactgccaatcacacacacacacacacacacacaca
cacacacacacacacgttagtaaagagagagagagactgatagatgtaaa
tacacaggtgggaaggatggaaggaaagagcagagggagaaaactgggag
gtgaacaggatgagggaggaggaggaaatgagagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_157273674_157274710
seq2: B6Ng01-249K22.b_48_1084

seq1  GAATTCACTAGTGAAGCTATCTGGGCCTGGGCCCTTTTAAGGGAAGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGTGAAGCTATCTGGGCCTGGGCCCTTTTAAGGGAAGTTTT  50

seq1  AAGATGACTAATTCAGGGCCTGCAGAGATGAATCAGTGGTTAGTAATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGACTAATTCAGGGCCTGCAGAGATGAATCAGTGGTTAGTAATACT  100

seq1  TGCAGCTCCTCCTGAGGAACTGAATTTGATTTACAGTACCCATGTTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTCCTCCTGAGGAACTGAATTTGATTTACAGTACCCATGTTGGGA  150

seq1  GTCACATGACCTGTAACTCTGGCTCCAGGTGATCGGAGACTGTTTTTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATGACCTGTAACTCTGGCTCCAGGTGATCGGAGACTGTTTTTTTG  200

seq1  TTTTCCAGGCACAGACATACACACACAGAAAAATTTACTGATTTAGGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAGGCACAGACATACACACACAGAAAAATTTACTGATTTAGGACC  250

seq1  AACAAGCTGGCTCAGAGGATAAGGGTGCTTGCTGCCAAGCTTGATGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCTGGCTCAGAGGATAAGGGTGCTTGCTGCCAAGCTTGATGACCT  300

seq1  GAGTTCAGTCCCCGGGACCCACATGGTAGAAGGAGAGATTTGAACCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGTCCCCGGGACCCACATGGTAGAAGGAGAGATTTGAACCCCAC  350

seq1  AGGTGGTCTTCTGGGGGGTGAACCTTAAACCCAAGACTCCGTACTCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTCTTCTGGGGGGTGAACCTTAAACCCAAGACTCCGTACTCTTGT  400

seq1  AATAGATTCTCACTATGTAGCTCAGGCTGCCTTCCGGGTCCTCCAGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATTCTCACTATGTAGCTCAGGCTGCCTTCCGGGTCCTCCAGCCTC  450

seq1  AGCCACCAGAGTCCAGGGATTTCAGGCATCCTTACCACAGCCGGCTCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCAGAGTCCAGGGATTTCAGGCATCCTTACCACAGCCGGCTCCTC  500

seq1  TAATTCCTACCCGAGTAACCTGAGCTGCTTTTTTTGTTGTTGCTGTTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCTACCCGAGTAACCTGAGCTGCTTTTTTTGTTGTTGCTGTTGAT  550

seq1  TGGTTCTGCTCCGTCATGGCTGGAATCACACTTTGTGTGATTTGATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTGCTCCGTCATGGCTGGAATCACACTTTGTGTGATTTGATTTCT  600

seq1  AAAGGCATTGAGCCCTGTTTTCTGGCATAGCATATGGTCTGACTTAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCATTGAGCCCTGTTTTCTGGCATAGCATATGGTCTGACTTAGACA  650

seq1  GTGTTCGTGCGCACTGTGCACACTTGAGGAGCATGTGGGTCTGGTGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCGTGCGCACTGTGCACACTTGAGGAGCATGTGGGTCTGGTGTTCC  700

seq1  TGGGTGGCTGCTCTGCTTCCATTTGCCTTTTGTCTGAGGAGTTTTGTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGCTGCTCTGCTTCCATTTGCCTTTTGTCTGAGGAGTTTTGTAGT  750

seq1  GAGTAAGGCTCCCTCAGTTTGC-TTTTCCGGTGAACTGTCTGTGGTTTTG  799
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAGTAAGGCTCCCTCAGTTTGCTTTTTCCGGTGAACTGTCTGTGGTTTTG  800

seq1  TTTTTTTTTTTATTTTTATCTTACGTGAGCTCTTTATATATTAAAAACCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTATTTTTATCTTACGTGAGCTCTTTATATATTAAAAACCC  850

seq1  TTGTTTATCATATGAGTTGCAA-TTTTTTTTTCTGGTTTAAATTTGTTTA  898
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGTTTATCATATGAGTTGCAATTTTTTTTTTCTGGTTTAAATTTGTTTA  900

seq1  TCAAGCTAGGCAGAC-TTTTTTTCTTTAGGCAGGGTCTTTTTGTAGTTCA  947
      ||||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  TCAAGCTAGGCAGACTTTTTTTTCTTTAGGCAAGGTCTTTTTGTAGTTCA  950

seq1  GGATGGCCTTGAATTCACTATCTTCTTCCCCCTGCCTCTTTTTTTTTTTT  997
      |||||||| || ||||||||||||||||||||||   || ||||||||||
seq2  GGATGGCCCTG-ATTCACTATCTTCTTCCCCCTG---CTCTTTTTTTTTT  996

seq1  AAAGATTATTTATAGTATGTATA-TGAATACACC-GTCATGG  1037
      |||||||| |||||||||||||| || ||||||| |||||||
seq2  AAAGATTA-TTATAGTATGTATATTGGATACACCGGTCATGG  1037

seq1: chr2_157486222_157486508
seq2: B6Ng01-249K22.g_73_359 (reverse)

seq1  CTGCTCTCATTTCCTCCTCCTCCCTCATCCTGTTCACCTCCCAGTTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCATTTCCTCCTCCTCCCTCATCCTGTTCACCTCCCAGTTTTCT  50

seq1  CCCTCTGCTCTTTCCTTCCATCCTTCCCACCTGTGTATTTACATCTATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGCTCTTTCCTTCCATCCTTCCCACCTGTGTATTTACATCTATCA  100

seq1  GTCTCTCTCTCTCTTTACTAACGTGTGTGTGTGTGTGTGTGTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTCTCTCTTTACTAACGTGTGTGTGTGTGTGTGTGTGTGTGTGT  150

seq1  GTGTGTGTGTGTGATTGGCAGTGTATGCATATGTGTGTTTACATTTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGATTGGCAGTGTATGCATATGTGTGTTTACATTTGCAT  200

seq1  GCCTGTGGTCCTCTCTGCATATGCAGATACACTGTACACTGAGGCAGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGGTCCTCTCTGCATATGCAGATACACTGTACACTGAGGCAGAAC  250

seq1  AACTATACAGCTAGTCCAGGTAGCCAGCTTGCTCCAG  287
      |||||||||||||||||||||||||||||||||||||
seq2  AACTATACAGCTAGTCCAGGTAGCCAGCTTGCTCCAG  287