BAC Information

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BAC

Clone NameB6Ng01-250B05
Chromosome2 (Build37)
Map Location 151,433,716 - 151,573,999
singlet/doubletdoublet
Overlap geneSnph, LOC668929, BC052486, 5430405G05Rik, Psmf1
Upstream gene2310001A20Rik, Acss1, Vsx1, Entpd6, LOC100043605, Pygb, Abhd12, Gins1, LOC668925, 4930519N13Rik, LOC668926, Nanp, LOC433486, LOC381390, 4930442J19Rik, LOC100043839, LOC100043840, 4921509C19Rik, Nsfl1c, Fkbp1a, Sdcbp2
Downstream geneRspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2, Sox12, Zcchc3, 6820408C15Rik, EG629114, LOC668930, 9230107O10Rik, 9230002F21Rik, EG654457, OTTMUSG00000015852, Defb29, 4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1, H13, Mcts2, Id1, LOC629170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250B05.bB6Ng01-250B05.g
ACCGA057723GA057724
length1,1511,151
definitionB6Ng01-250B05.b B6Ng01-250B05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,433,716 - 151,434,885)(151,572,820 - 151,573,999)
sequence
gaattcttcctgtgccctctctctagcctgagtaggactgctcctactgt
tcttataagcaaaggagaagctctgtccagagacccccgatcttgcctct
cccaactgtctcttcttgcagcctaggaacagtgcacgcagtagcctgag
accctcaggagctctgagccacatcacactgtcactggtggtgatgtagg
gcctgcctcacatctctccagtccagcttccccaagcactcacggtagca
tcctttgttcatgggttgcgttgagacccaaccaaggtaataagggagtg
ataggtaattcttcggaaatcagaatgcttctttgcattattaactctta
aaggcatctgtccttctttagagataatctgtacacctatcagagagtct
aataaggcattagctgattctgaagttataggcaccctcttccaggccag
ctgcccagggacattcactagagcaacatctggcaggcttcctacatagg
cagggaacagtaggggaatcttgggtccactccttccaatcccagttgct
ccaggatagaccttctgcagacactagggaaaggtgtgtgaacagagggg
tcatggtgccaacttgagcttggtagccaacctagcaaatgactcctggc
agatggaggccccccagcagccctgcatatggcttcccctgcgcttcctg
actgatagagctgtcaagctctgcagctcctctcctgcccctccttctcc
tgagcagcacaggaagaggataatggtggcatgccagcccctggtttctc
tctcctctttgggccttggcttttaagatcctgggttctcaccattactt
atgccagcaccaatccccaataccagaaaggggcttaaagtggtctcaga
agcagaggatggaaaatgccttagggagactgtcaccattttatccacaa
agaaatgagaattcagcagagcaggtaacgtgtttacagttacccagcaa
gtgggagacagtctggactgcagctggattccagcaaaagcttcttcact
catccctcaacccgtctcccttaaagcagcaatgcaatagagaaccgaga
gatttccaaggaagctttagcgaagctgagggttaagacagggttctacc
a
gaattcaggggtggattcccgcagactcggacaaatgctgttagagggat
ggacttagaatgcttattagttattcatactatccggtgtttaccacgag
atattaaccgggcaggaagccacttgaggaaagagggtttattttgtctc
tgtttccttggaaaggaatggcggtgagattagcttctgtctctagccac
aggagcctggagcgcaactaactcacaacaaggtgggtaatgaggcagag
aagatgattataactgcgttgggcctcctaaatcctttctccagtgacat
ctattcttccaaaggttccacaggctccatcacaaagcaccaccagccgg
ggaccaatttaagcagatgagcctcggggtaaggtggagaaggcggccag
tggtggggaacaggtagaaatgatgaaggctgtcaaaagctactgtggaa
ttctgccctccctggcatggttatcaccatctcaaaaccagagccgctcc
cattacccacacacctctcactgaggcaagatggaaactatggggacaga
ggaagggacaagagcccctcatggcagcttctcaccagctgaggagccat
aattccagcacacacttgttacaaaggctgccactgggaaataatattcc
tttcgtatgtagataaaagtaacaatgaaccaggcttatagccagagtgc
gtatggccctgagttgggactcattcctttccccaggctgctaacttggt
tttcaataaggcatcctgtcttcctgcatcctggaaatcttatcaatggt
aatcctgtcaggtgtgttagttagggtttctattgctgtgatgaaagact
gtggtcaaaagcacttgttagagaaagggtttgttttgcttacacttcca
catcacagttcaccatgaaaggaaattggggcaagagccaggaggcagag
ctgatgcagagctatgaagatgctgcttactggcttgctcactatggctg
ctcagctgctttcttataacactgaggactaccagtgatgtgcactaccg
cagcgagctggcccctacacctcagtcataatgaaattgcactgcaagct
gcaacaaggcaatctggttgaatttcagtgagtcctcttcaatgactcca
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_151433716_151434885
seq2: B6Ng01-250B05.b_43_1193

seq1  GAATTCTTCCTGTGCCCTCTCTCTAGCCTGAGTAGGACTGCTCCTACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTGTGCCCTCTCTCTAGCCTGAGTAGGACTGCTCCTACTGT  50

seq1  TCTTATAAGCAAAGGAGAAGCTCTGTCCAGAGACCCCCGATCTTGCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAAGCAAAGGAGAAGCTCTGTCCAGAGACCCCCGATCTTGCCTCT  100

seq1  CCCAACTGTCTCTTCTTGCAGCCTAGGAACAGTGCACGCAGTAGCCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTGTCTCTTCTTGCAGCCTAGGAACAGTGCACGCAGTAGCCTGAG  150

seq1  ACCCTCAGGAGCTCTGAGCCACATCACACTGTCACTGGTGGTGATGTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGGAGCTCTGAGCCACATCACACTGTCACTGGTGGTGATGTAGG  200

seq1  GCCTGCCTCACATCTCTCCAGTCCAGCTTCCCCAAGCACTCACGGTAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCACATCTCTCCAGTCCAGCTTCCCCAAGCACTCACGGTAGCA  250

seq1  TCCTTTGTTCATGGGTTGCGTTGAGACCCAACCAAGGTAATAAGGGAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTTCATGGGTTGCGTTGAGACCCAACCAAGGTAATAAGGGAGTG  300

seq1  ATAGGTAATTCTTCGGAAATCAGAATGCTTCTTTGCATTATTAACTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTAATTCTTCGGAAATCAGAATGCTTCTTTGCATTATTAACTCTTA  350

seq1  AAGGCATCTGTCCTTCTTTAGAGATAATCTGTACACCTATCAGAGAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATCTGTCCTTCTTTAGAGATAATCTGTACACCTATCAGAGAGTCT  400

seq1  AATAAGGCATTAGCTGATTCTGAAGTTATAGGCACCCTCTTCCAGGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGCATTAGCTGATTCTGAAGTTATAGGCACCCTCTTCCAGGCCAG  450

seq1  CTGCCCAGGGACATTCACTAGAGCAACATCTGGCAGGCTTCCTACATAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAGGGACATTCACTAGAGCAACATCTGGCAGGCTTCCTACATAGG  500

seq1  CAGGGAACAGTAGGGGAATCTTGGGTCCACTCCTTCCAATCCCAGTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAACAGTAGGGGAATCTTGGGTCCACTCCTTCCAATCCCAGTTGCT  550

seq1  CCAGGATAGACCTTCTGCAGACACTAGGGAAAGGTGTGTGAACAGAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGATAGACCTTCTGCAGACACTAGGGAAAGGTGTGTGAACAGAGGGG  600

seq1  TCATGGTGCCAACTTGAGCTTGGTAGCCAACCTAGCAAATGACTCCTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGTGCCAACTTGAGCTTGGTAGCCAACCTAGCAAATGACTCCTGGC  650

seq1  AGATGGAGGCCCCCCAGCAGCCCTGCATATGGCTTCCCCTGCGCTTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGGCCCCCCAGCAGCCCTGCATATGGCTTCCCCTGCGCTTCCTG  700

seq1  ACTGATAGAGCTGTCAAGCTCTGCAGCTCCTCTCCTGCCCCTCCTTCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATAGAGCTGTCAAGCTCTGCAGCTCCTCTCCTGCCCCTCCTTCTCC  750

seq1  TGAGCAGCACAGGAAGAGGATAATGGTGGCATGCCAGCCCCTGGTTTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGCACAGGAAGAGGATAATGGTGGCATGCCAGCCCCTGGTTTCTC  800

seq1  TCTCCTCTTTGGGCCTTGGCTTTTAAGATCCTGGGTTCTCACCATTACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTTTGGGCCTTGGCTTTTAAGATCCTGGGTTCTCACCATTACTT  850

seq1  ATGCCAGCACCAATCCCCAATACCAGAAAGGGGCTTAAAGTGGTCTCAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGCACCAATCCCCAATACCAGAAAGGGGCTTAAAGTGGTCTCAGA  900

seq1  AGCAGAGGATGGAAAATGCCTTAGGGAGACTGTCACCATTTTATCCACAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGGATGGAAAATGCCTTAGGGAGACTGTCACCATTTTATCCACAA  950

seq1  AGAAATGAGAATTCAGCAAGAGCAGGTAACGTGTTTACAGTTACCCAGCA  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGAAATGAGAATTCAGC-AGAGCAGGTAACGTGTTTACAGTTACCCAGCA  999

seq1  AGTGGGAGACAGTCTGGACTGGCAGCTGGATTCCAGCAAAAGGCCTTCTT  1050
      |||||||||||||||||||| |||||||||||||||||||||  ||||||
seq2  AGTGGGAGACAGTCTGGACT-GCAGCTGGATTCCAGCAAAAG--CTTCTT  1046

seq1  CACTCATCCCTCCACCCGTCTTCCCTTAAAAGCAGGCCAAATGCAATAAG  1100
      |||||||||||| ||||||| |||||| |||||||    |||||||||  
seq2  CACTCATCCCTCAACCCGTC-TCCCTT-AAAGCAG---CAATGCAATA--  1089

seq1  GAGAACGGAGAGATTTTCCAAAGGGGAAGCTTTAGGCGGAAAGCTGAGGG  1150
      |||||| |||||| |||||||   |||||||||| |||  ||||||||||
seq2  GAGAACCGAGAGA-TTTCCAA---GGAAGCTTTA-GCG--AAGCTGAGGG  1132

seq1  GTAAGACAAGGGTTCTACCA  1170
       |||||| ||||||||||||
seq2  TTAAGAC-AGGGTTCTACCA  1151

seq1: chr2_151572820_151573999
seq2: B6Ng01-250B05.g_67_1217 (reverse)

seq1  GTGGAGTCATTTGGGAAGAGGAAACCTCAACTGGGAAAATATTCCCACCA  50
      |||||||||||   ||||||||   ||| ||||   |||   | | ||||
seq2  GTGGAGTCATT---GAAGAGGA---CTC-ACTG---AAA---TTCAACCA  37

seq1  GATTGGCCTGTGTGCAAGCCTGCAGTGCATTTTCAATTAATGACTGAGGT  100
      ||||| | ||| ||| ||| ||||||||| |||||  | |||||||||||
seq2  GATTGCCTTGT-TGC-AGCTTGCAGTGCAATTTCA--TTATGACTGAGGT  83

seq1  GTAGGGGCCCAGCTCGCTGCGGGTAGTGCACCCTTGGGCTGGTAGTCCTC  150
      ||||||| |||||||||||| ||||||||||       ||||||||||||
seq2  GTAGGGG-CCAGCTCGCTGC-GGTAGTGCAC---ATCACTGGTAGTCCTC  128

seq1  AGTGTTATAAGAAAGCAGGCTGAGCAAGCCATAGTGAGCAAGCCAGTAAG  200
      ||||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  AGTGTTATAAGAAAGCA-GCTGAGC-AGCCATAGTGAGCAAGCCAGTAAG  176

seq1  CAGCACTCCTTCATAGCCTCTGCATCAGCTCCTGCCTCCTGGCTCTTGCC  250
      |||||   |||||||| ||||||||||||| |||||||||||||||||||
seq2  CAGCA--TCTTCATAG-CTCTGCATCAGCT-CTGCCTCCTGGCTCTTGCC  222

seq1  CCAATTTCCTTTCATGGTGAACTGTGATGTGGAAGTGTAAGCAAAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTCCTTTCATGGTGAACTGTGATGTGGAAGTGTAAGCAAAACAAA  272

seq1  CCCTTTCTCTAACAAGTTGCTTTTGACCACAGTCTTTCATCACAGCAATA  350
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCCTTTCTCTAACAAG-TGCTTTTGACCACAGTCTTTCATCACAGCAATA  321

seq1  GAAACCCTAACTAACACACCTGACAGGATTACCATTGATAAGATTTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTAACTAACACACCTGACAGGATTACCATTGATAAGATTTCCAG  371

seq1  GATGCAGGAAGACAGGATGCCTTATTGAAAACCAAGTTAGCAGCCTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGGAAGACAGGATGCCTTATTGAAAACCAAGTTAGCAGCCTGGGG  421

seq1  AAAGGAATGAGTCCCAACTCAGGGCCATACGCACTCTGGCTATAAGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATGAGTCCCAACTCAGGGCCATACGCACTCTGGCTATAAGCCTG  471

seq1  GTTCATTGTTACTTTTATCTACATACGAAAGGAATATTATTTCCCAGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTGTTACTTTTATCTACATACGAAAGGAATATTATTTCCCAGTGG  521

seq1  CAGCCTTTGTAACAAGTGTGTGCTGGAATTATGGCTCCTCAGCTGGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTTGTAACAAGTGTGTGCTGGAATTATGGCTCCTCAGCTGGTGAG  571

seq1  AAGCTGCCATGAGGGGCTCTTGTCCCTTCCTCTGTCCCCATAGTTTCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCCATGAGGGGCTCTTGTCCCTTCCTCTGTCCCCATAGTTTCCAT  621

seq1  CTTGCCTCAGTGAGAGGTGTGTGGGTAATGGGAGCGGCTCTGGTTTTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTCAGTGAGAGGTGTGTGGGTAATGGGAGCGGCTCTGGTTTTGAG  671

seq1  ATGGTGATAACCATGCCAGGGAGGGCAGAATTCCACAGTAGCTTTTGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGATAACCATGCCAGGGAGGGCAGAATTCCACAGTAGCTTTTGACA  721

seq1  GCCTTCATCATTTCTACCTGTTCCCCACCACTGGCCGCCTTCTCCACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCATCATTTCTACCTGTTCCCCACCACTGGCCGCCTTCTCCACCTT  771

seq1  ACCCCGAGGCTCATCTGCTTAAATTGGTCCCCGGCTGGTGGTGCTTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCGAGGCTCATCTGCTTAAATTGGTCCCCGGCTGGTGGTGCTTTGTG  821

seq1  ATGGAGCCTGTGGAACCTTTGGAAGAATAGATGTCACTGGAGAAAGGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCCTGTGGAACCTTTGGAAGAATAGATGTCACTGGAGAAAGGATT  871

seq1  TAGGAGGCCCAACGCAGTTATAATCATCTTCTCTGCCTCATTACCCACCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGGCCCAACGCAGTTATAATCATCTTCTCTGCCTCATTACCCACCT  921

seq1  TGTTGTGAGTTAGTTGCGCTCCAGGCTCCTGTGGCTAGAGACAGAAGCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGAGTTAGTTGCGCTCCAGGCTCCTGTGGCTAGAGACAGAAGCTA  971

seq1  ATCTCACCGCCATTCCTTTCCAAGGAAACAGAGACAAAATAAACCCTCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACCGCCATTCCTTTCCAAGGAAACAGAGACAAAATAAACCCTCTT  1021

seq1  TCCTCAAGTGGCTTCCTGCCCGGTTAATATCTCGTGGTAAACACCGGATA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAAGTGGCTTCCTGCCCGGTTAATATCTCGTGGTAAACACCGGATA  1071

seq1  GTATGAATAACTAATAAGCATTCTAAGTCCATCCCTCTAACAGCATTTGT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAATAACTAATAAGCATTCTAAGTCCATCCCTCTAACAGCATTTGT  1121

seq1  CCGAGTCTGCGGGAATCCACCCCTGAATTC  1180
      ||||||||||||||||||||||||||||||
seq2  CCGAGTCTGCGGGAATCCACCCCTGAATTC  1151