BAC Information

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BAC

Clone NameB6Ng01-251G05
Chromosome2 (Build37)
Map Location 85,010,061 - 85,010,714
singlet/doubletsinglet
Overlap geneLOC625033
Upstream geneCalcrl, Tfpi, LOC672763, Ctnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1
Downstream geneLrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251G05.bB6Ng01-251G05.g
ACCGA058661GA058662
length1,037654
definitionB6Ng01-251G05.b B6Ng01-251G05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaactctcacaacaaaaataacaggaagcaacagtgatttttcc
taaatgtctcttaatatcaatggactcaattcccaaataaaaagacatag
actaacagactggctacataaacaggacccaactttttgctgcttacagg
aaacccacctcagggaaaaagactgacactacctcagagtaaaaggctgg
atagcaattttccaagcaaatggtctgaagaaacaagctggagtcgccat
tctaatattgaataaaatcaacttccaacccaaagttatcaaaaaaaaaa
aaaaagacaaggaggggcacttcatactcatcaaaggtaatatcttccaa
gataaactctcaattctgattatctatgctccaaacacaaaagcatccac
attcattaaagaaactatagtaaagctcaaagcacacattggacctcaca
caatattgggggagacttcatcaccccactctcatcaacggacagatact
ggaaatagaaactaaacaaaggcacagtgaaactaacagaagttatgaaa
caaacggacctaacagatatctacagaatattttattataaaacaaaagg
atataccttctaaacacctcatggcaccttctgtaaaattgaccatataa
ttgaacacaaaacaggcttcaacaaatacaaaaatattgaaattatgcca
tgtatcatatcagatcaccacggactaaggctgatcttcattaaaagcat
aaataatagaaagccaacattcacatggaagcagaacaacactctactca
atgatatattggtcaaggaagaaataaagaaagagctgaaggggtctgca
accctataggtggaacaacaatatgaactaagcagtacccccagagctca
tgtctctagctcagagacatgtcctagtcggccatcatttggaagaaagg
ccccttggtctagcaaactttatatgccccagtacaggggactccagggc
cagaagtgggagtgagtggggtagggaagcagggggc
gaattcagtggttggggtgggttcatatctttcccatcatcttgtctttc
catgaataaatgcagtctcatctcaatctccagtctgatgctatggagcc
attgctctgtgctacccactagctgggaggacagccaaccccccaagatg
tcaggttgaatgtctatgtattttctgctggaatgaaccttgagggcagc
ccacagttgactttgcatctcaagcttgctccgggcagatttctccagca
ttcagcaggacttcctttgggatgcctcaaaggcatagatgagagtgttc
tgagcctccgtgtctgtcagacttcattttaggagatgctgtactcaccc
taggggcttcctaagggtaaagcatccatgtccacctgttcatcttggaa
gcattgacagagggtagatggcaaggtgagctggagcagcagaaaaaaaa
aaatagtactctcctcacagagtgcacatcagacaggagcagagcagcag
tgctctgcagaagagacaaaagtcttgctgcagagtgtagccagggatct
cagctagctgggcacattccacagaggagcttttgaggagggatgtagga
ggcaagaccagggaagggaagaagtgtgctcggtgaagaatgggatggga
gaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85010061_85010714
seq2: B6Ng01-251G05.g_67_720

seq1  GAATTCAGTGGTTGGGGTGGGTTCATATCTTTCCCATCATCTTGTCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGGTTGGGGTGGGTTCATATCTTTCCCATCATCTTGTCTTTC  50

seq1  CATGAATAAATGCAGTCTCATCTCAATCTCCAGTCTGATGCTATGGAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATAAATGCAGTCTCATCTCAATCTCCAGTCTGATGCTATGGAGCC  100

seq1  ATTGCTCTGTGCTACCCACTAGCTGGGAGGACAGCCAACCCCCCAAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTGTGCTACCCACTAGCTGGGAGGACAGCCAACCCCCCAAGATG  150

seq1  TCAGGTTGAATGTCTATGTATTTTCTGCTGGAATGAACCTTGAGGGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTGAATGTCTATGTATTTTCTGCTGGAATGAACCTTGAGGGCAGC  200

seq1  CCACAGTTGACTTTGCATCTCAAGCTTGCTCCGGGCAGATTTCTCCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTGACTTTGCATCTCAAGCTTGCTCCGGGCAGATTTCTCCAGCA  250

seq1  TTCAGCAGGACTTCCTTTGGGATGCCTCAAAGGCATAGATGAGAGTGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAGGACTTCCTTTGGGATGCCTCAAAGGCATAGATGAGAGTGTTC  300

seq1  TGAGCCTCCGTGTCTGTCAGACTTCATTTTAGGAGATGCTGTACTCACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTCCGTGTCTGTCAGACTTCATTTTAGGAGATGCTGTACTCACCC  350

seq1  TAGGGGCTTCCTAAGGGTAAAGCATCCATGTCCACCTGTTCATCTTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCTTCCTAAGGGTAAAGCATCCATGTCCACCTGTTCATCTTGGAA  400

seq1  GCATTGACAGAGGGTAGATGGCAAGGTGAGCTGGAGCAGCAGAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGACAGAGGGTAGATGGCAAGGTGAGCTGGAGCAGCAGAAAAAAAA  450

seq1  AAATAGTACTCTCCTCACAGAGTGCACATCAGACAGGAGCAGAGCAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTACTCTCCTCACAGAGTGCACATCAGACAGGAGCAGAGCAGCAG  500

seq1  TGCTCTGCAGAAGAGACAAAAGTCTTGCTGCAGAGTGTAGCCAGGGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGCAGAAGAGACAAAAGTCTTGCTGCAGAGTGTAGCCAGGGATCT  550

seq1  CAGCTAGCTGGGCACATTCCACAGAGGAGCTTTTGAGGAGGGATGTAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAGCTGGGCACATTCCACAGAGGAGCTTTTGAGGAGGGATGTAGGA  600

seq1  GGCAAGACCAGGGAAGGGAAGAAGTGTGCTCGGTGAAGAATGGGATGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGACCAGGGAAGGGAAGAAGTGTGCTCGGTGAAGAATGGGATGGGA  650

seq1  GAGA  654
      ||||
seq2  GAGA  654