BAC Information

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BAC

Clone NameB6Ng01-251P04
Chromosome2 (Build37)
Map Location 42,874,001 - 42,874,566
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b
Downstream geneLOC100041228, LOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251P04.bB6Ng01-251P04.g
ACCGA059077GA059078
length1,180869
definitionB6Ng01-251P04.b B6Ng01-251P04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattaagtcctggtctttctcagcatacagacactagttaacaa
atgatgaacttagatttaaaggacaatttagaaatggtcataattttgga
caggggggaaattaaatagaggatttagacttgggaatttctatcttttc
tttcatcttatctatcttttctttcttaggtaaatggaaggggactgaaa
agaaaaaagaagcatagagtaatattatgagaaattagatatatgggaat
ggattactcaatttaaacaaaacattttgtagccataatcatacattggt
agaaatctttatattttgatacagaattgaagttacattttcttacattg
gtacagaatttataaattaatacaggtataagattttcattgacatcaat
ttgtgtatattgctataaaattttaaataaattttgttacttttagatag
gcattgtgcctatgcaacttatttaagaatataaggcttagacccagtac
ttttaatagatgctattacaaactgttcaggatgcttaagtaatgtgact
taaagataaactcatggtaatattagattctgattaaacccatatatccc
tcaacagaggaatggatacagaaatttactcacctattaaaaacaatgaa
tttctgaaattcttaggacagtgaatggaactagaacatatcatctgagt
gaggaaacacaatcataaaagaacaaacatggtatgcactcactgataag
tggatattagccaagaagctcggaatacccaagatacaattcacagacca
catgaagctcaagaagaaggaagaccaaagtgtggatacctcggtctttc
tttggaagagggaacaaaacgcctgtgggaggagatgcagagtcaaagta
cggagcaaggactgaatgaacggccatccagagcctgttctacctggaat
ccatccacctagagtcaccaaacccagacactattgtggatgccaacaag
tgcttgctgacagaagcctgataatacagtctctgagagactctgcagtg
ctgacaaatacagagtggaacactctcagtcagcatgacctggcatgctc
tcattgaaggccaggaaccaggatctgatggtgcagtcatagcgacatca
catgcacagtcagctcccagctaggagctt

gaattcattttcctagatctatactcagaagtgtagttacagaatcatat
ggcattgctttttctagcttattgagaaatactcccacttctatccataa
tggctggactatctaatatacacttcaatcagcagggaattgttctttct
ccaacactttttaaatctggaacttcttacttttaagtttattgatttca
cttttgagattataatataacgtctcccttgcctttttccctccaaattc
ttccatatgcctctctgtgttctctttaaaattcatggcctccttttatt
aattggtttacacacatgtgtgcgcacacacacacacacacacacatgca
cacacacactcatacatcctcctcagtccataggtttgtatgttttcagg
gctggctgtttggtattagatagctcactgggatgcttttccatgaagaa
gactcttttcccgactctgggcattcttagatgtctgtagttctctgtgt
aggactgagtaggcatatcaagtgtttctctatccaccctcgtatgtctg
ttgttgtccttgttgagctcatatttaggtagttacattggtgagacttt
atgcacaaaattcccaatgatatgcaaaatcaaaatctcagagaaaactc
catgattctctggtagttaaatgttttctgcctcctcttcctcaatgttc
cccaagtcttttaggttgtttttaataacaccgattcatagatgtattca
tgggagcatattcttatttttaaattgaaattaatatcagtcttggttta
agacacagacacacacacacagagagagagagagagagagagagagagag
agagggagggagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42874001_42874566
seq2: B6Ng01-251P04.g_371_936 (reverse)

seq1  TCTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTG  50

seq1  TGTGTGTGTGTCTGTGTCTTAAACCAAGACTGATATTAATTTCAATTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTCTGTGTCTTAAACCAAGACTGATATTAATTTCAATTTAA  100

seq1  AAATAAGAATATGCTCCCATGAATACATCTATGAATCGGTGTTATTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAATATGCTCCCATGAATACATCTATGAATCGGTGTTATTAAAA  150

seq1  ACAACCTAAAAGACTTGGGGAACATTGAGGAAGAGGAGGCAGAAAACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTAAAAGACTTGGGGAACATTGAGGAAGAGGAGGCAGAAAACATT  200

seq1  TAACTACCAGAGAATCATGGAGTTTTCTCTGAGATTTTGATTTTGCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTACCAGAGAATCATGGAGTTTTCTCTGAGATTTTGATTTTGCATAT  250

seq1  CATTGGGAATTTTGTGCATAAAGTCTCACCAATGTAACTACCTAAATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGAATTTTGTGCATAAAGTCTCACCAATGTAACTACCTAAATATG  300

seq1  AGCTCAACAAGGACAACAACAGACATACGAGGGTGGATAGAGAAACACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAACAAGGACAACAACAGACATACGAGGGTGGATAGAGAAACACTT  350

seq1  GATATGCCTACTCAGTCCTACACAGAGAACTACAGACATCTAAGAATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCCTACTCAGTCCTACACAGAGAACTACAGACATCTAAGAATGCC  400

seq1  CAGAGTCGGGAAAAGAGTCTTCTTCATGGAAAAGCATCCCAGTGAGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCGGGAAAAGAGTCTTCTTCATGGAAAAGCATCCCAGTGAGCTAT  450

seq1  CTAATACCAAACAGCCAGCCCTGAAAACATACAAACCTATGGACTGAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATACCAAACAGCCAGCCCTGAAAACATACAAACCTATGGACTGAGGA  500

seq1  GGATGTATGAGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGCGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTATGAGTGTGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGCGCAC  550

seq1  ACATGTGTGTAAACCA  566
      ||||||||||||||||
seq2  ACATGTGTGTAAACCA  566


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