BAC Information

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BAC

Clone NameB6Ng01-253B05
Chromosome2 (Build37)5 (Build37)
Map Location 94,615,679 - 94,616,819148,177,137 - 148,177,226
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneExt2, 2610203E10Rik, Gm1967, Gm1335, LOC620695, Alkbh3, Hsd17b12, E530001K10Rik, Ttc17, Itpa-ps1, Api5, LOC100043259
Downstream geneLOC100042843
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253B05.bB6Ng01-253B05.g
ACCGA059906GA059907
length1,137102
definitionB6Ng01-253B05.b B6Ng01-253B05.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(94,615,679 - 94,616,819)(148,177,137 - 148,177,226)
sequence
gaattcaatagtgaaactcaaactactgactcattattatctgtgtgagc
ctgtacaaatcagatcactcagtgcctcagttctgcatcttttaatggaa
ggtataaaatgaacctatattcatagttacaataacctggccctggatga
gtggctggcattggtggaggatactttccaagagaaagcaacagtaaaga
aagctaagaaaatgttccggagtcacccaggggagcaagagagcatagta
tgccaagcatagatgatccagctgccaaaccggactcacagtgcaagccc
aactcataccacaatccgatcctattcatcagtgccattcacccttccta
cccaccagaaaacactgacattttaaagccaagattttattgaaatgtct
gccccttgcaagaacgaaaacttcctcagcacaaccgcaagccattcgaa
gaaagaaagtcaggttgcgttgaaaaactcaaaggctctccatctttgaa
ccctggagaacacttgttggtcagactgtgagggaaagccaaaaaatttc
ggggcctctttccttcctccttttcaagatgcctgtcccaaactgccttc
aagcctaaacagtgaatgaccctgttgacaaggtcacgctggttctttgc
ccgccataaaaacggactttctcagtttctgctgtggatgaaatgtagta
tttctgtttgcgatttcaatttcacagccgactggcatctgcagagacag
agaattctaataaaattgcaggagcatttaatacaatgactggcaggtgg
gaaagagttgctagcagctccatttttctgattatgttaacaaaacatgg
catgcatttttccaatgccccaacactatttcatttagaatttaaatcta
ataactgaaaacaggtatcagggttctggtagggggcaatgttgtttacc
acctgaatgggttccatgatatatagattattttccccttttctaatttg
acaaattacatcccacctttccacacttaattaaagtacacaaataattc
aaaaaaaatatctgagtgcagtgttgcatcaataatatcctatggcacac
tggacttgaagtaatcatcaacagacaattctttatc

cgcggaattctctctctctctctctctctctctctctctctctctctctc
tccctttctcttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_94615679_94616819
seq2: B6Ng01-253B05.b_42_1178 (reverse)

seq1  GATAAAGAATGCCTTGTTGATGATTAATTTTCAAGTCAAGTGTG-CATA-  48
      ||||||||||    ||||||||||||   |||||||| |||||| |||| 
seq2  GATAAAGAATTGTCTGTTGATGATTA--CTTCAAGTCCAGTGTGCCATAG  48

seq1  GATAATTTATTGATGCAACACTGCACTCAGATAATTTTTTTTGAAATTAT  98
      ||||  |||||||||||||||||||||||||| |||||||||| ||||||
seq2  GATA--TTATTGATGCAACACTGCACTCAGAT-ATTTTTTTTG-AATTAT  94

seq1  TTGTGTAACTTTATTAAGTGTGG-AAGGTGGGATGTTAATTTGTCAAATT  147
      |||||||  || ||||||||||| ||||||||||| ||||||||||||||
seq2  TTGTGTACTTTAATTAAGTGTGGAAAGGTGGGATG-TAATTTGTCAAATT  143

seq1  AG-AAAGGGGAAAATAATCTATATATCATGGAA-CCATTCAGGTGGTAAA  195
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGAAAAGGGGAAAATAATCTATATATCATGGAACCCATTCAGGTGGTAAA  193

seq1  CAACATTGCCCCCTACCAGAACCCCTGATACCTGTTTTCAGTTATTAGAT  245
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAACATTGCCCCCTACCAGAA-CCCTGATACCTGTTTTCAGTTATTAGAT  242

seq1  TTAAATTCTAAATGAAATAGTGTTGGGGCATTGGAAAAATGCATGCCATG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTCTAAATGAAATAGTGTTGGGGCATTGGAAAAATGCATGCCATG  292

seq1  TTTTGTTAACATAATCAGAAAAATGGAGCTGCTAGCAACTCTTTCCCACC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAACATAATCAGAAAAATGGAGCTGCTAGCAACTCTTTCCCACC  342

seq1  TGCCAGTCATTGTATTAAATGCTCCTGCAATTTTATTAGAATTCTCTGTC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGTCATTGTATTAAATGCTCCTGCAATTTTATTAGAATTCTCTGTC  392

seq1  TCTGCAGATGCCAGTCGGCTGTGAAATTGAAATCGCAAACAGAAATACTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGATGCCAGTCGGCTGTGAAATTGAAATCGCAAACAGAAATACTA  442

seq1  CATTTTCATCCACAGCAGAAACTGAGAAAGTCCGTTTTTATGGCGGGCAA  495
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CA-TTTCATCCACAGCAGAAACTGAGAAAGTCCGTTTTTATGGCGGGCAA  491

seq1  AGAACCAGCGTGACCTTGTCAACAGGGTCATTCACTGTTTAGGCTTGAAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAGCGTGACCTTGTCAACAGGGTCATTCACTGTTTAGGCTTGAAG  541

seq1  GCAGTTTGGGACAGGCATCTTGAAAAGGAGGAAGGAAAGAGGCCCCGAAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTGGGACAGGCATCTTGAAAAGGAGGAAGGAAAGAGGCCCCGAAA  591

seq1  TTTTTTGGCTTTCCCTCACAGTCTGACCAACAAGTGTTCTCCAGGGTTCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGCTTTCCCTCACAGTCTGACCAACAAGTGTTCTCCAGGGTTCA  641

seq1  AAGATGGAGAGCCTTTGAGTTTTTCAACGCAACCTGACTTTCTTTCTTCG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGAGAGCCTTTGAGTTTTTCAACGCAACCTGACTTTCTTTCTTCG  691

seq1  AATGGCTTGCGGTTGTGCTGAGGAAGTTTTCGTTCTTGCAAGGGGCAGAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTGCGGTTGTGCTGAGGAAGTTTTCGTTCTTGCAAGGGGCAGAC  741

seq1  ATTTCAATAAAATCTTGGCTTTAAAATGTCAGTGTTTTCTGGTGGGTAGG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAATAAAATCTTGGCTTTAAAATGTCAGTGTTTTCTGGTGGGTAGG  791

seq1  AAGGGTGAATGGCACTGATGAATAGGATCGGATTGTGGTATGAGTTGGGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGAATGGCACTGATGAATAGGATCGGATTGTGGTATGAGTTGGGC  841

seq1  TTGCACTGTGAGTCCGGTTTGGCAGCTGGATCATCTATGCTTGGCATACT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTGTGAGTCCGGTTTGGCAGCTGGATCATCTATGCTTGGCATACT  891

seq1  ATGCTCTCTTGCTCCCCTGGGTGACTCCGGAACATTTTCTTAGCTTTCTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTCTTGCTCCCCTGGGTGACTCCGGAACATTTTCTTAGCTTTCTT  941

seq1  TACTGTTGCTTTCTCTTGGAAAGTATCCTCCACCAATGCCAGCCACTCAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTGCTTTCTCTTGGAAAGTATCCTCCACCAATGCCAGCCACTCAT  991

seq1  CCAGGGCCAGGTTATTGTAACTATGAATATAGGTTCATTTTATACCTTCC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCCAGGTTATTGTAACTATGAATATAGGTTCATTTTATACCTTCC  1041

seq1  ATTAAAAGATGCAGAACTGAGGCACTGAGTGATCTGATTTGTACAGGCTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGATGCAGAACTGAGGCACTGAGTGATCTGATTTGTACAGGCTC  1091

seq1  ACACAGATAATAATGAGTCAGTAGTTTGAGTTTCACTATTGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGATAATAATGAGTCAGTAGTTTGAGTTTCACTATTGAATTC  1137


seq1: chr5_148177137_148177226
seq2: B6Ng01-253B05.g_64_159 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACAC--AGAGA----  44
      |||||||||||||||||||||||||||||||||||||||  |||||    
seq2  CACACACACACACACACACACACACACACACACACACACGAAGAGAAAGG  50

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAT  90
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAT  96


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