BAC Information

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BAC

Clone NameB6Ng01-256D12
Chromosome2 (Build37)
Map Location 69,734,845 - 69,858,071
singlet/doubletdoublet
Overlap geneZfp650
Upstream geneLass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2, Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik
Downstream geneMyo3b, LOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1, LOC100039766, Gorasp2, Tlk1, Mettl8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256D12.bB6Ng01-256D12.g
ACCGA062236GA062237
length1,098929
definitionB6Ng01-256D12.b B6Ng01-256D12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,856,976 - 69,858,071)(69,734,845 - 69,735,764)
sequence
gaattctccctcctgaatatgttatgttcatatactttaggctgtcaaga
ttatttgtatctgtaagtgctaagggcctaaaactctttgaataaactcc
ctgtttcgtatggaaaactcaaagccagctataattcctgcagagcacgc
tgtatttactacttgtaggaataaaacagtactggtgattttttttctag
atattactccattcacattataattccatatattcattagccaacgaatt
tctgtaaaacactttctaggaattgggaaattcaaagaaaaataagaatt
tctgttctgtgaaggcttcattaaagcaacagatgataaacagccgctaa
gctcagcagcacttgggattcagagctcaccacacgggaggccctgggtt
gactcttgtccatataaacacagcaatgcttaaagagggtgacgcagcag
cagagttggaggaggtaaggctgtaaggaaaattgattagcagacacttt
tgctggaagaggccaagcctcaaaaagcatagattcaacagaagacagta
ctgctgctagggacagaagcagcagcgataggcatgcttacaggcacttc
aaagtctgcagtacacttaaacatatttgtgtcaaatgaagcaaggtagc
agattcatgatatcacaacaatggaaacacaagcaagacggtgacatgtc
ttgactgccaagacagaacctcaatgagacacagcaggaacatgttccat
gagaactagaacatgcaatgattttatctaagattagaagtcacctgcat
ctggtcaccaaggctatggattcctctcaaacgactcttgcagtagctac
tttctgacttctacaatcagaaaagtagtctggagtctcttcacctctga
acaacctggtaatttatcgtcttactctactaaaaggtcaacagaatgac
cctgtgaaataacgatgccaccagatcactttcgggttctcaggaacaga
aacccatgggcatgcagtggcctgcagcctaccctccactctcagtcact
ggtcactataacccctttaccacagctgggcatacaaaccccacattt
gaattcagtagtaattaagtctctgataacagcaatcaacatctgaagac
cagatatggatgcctaaaatacatctggtagatgttgtgtttaattccta
tgttccaggcaaataaagaaaaaaaaaacccacttatcttttttcttttt
atttattcttctctcatacattacatacatcacatacatcccgactacag
agaaaccacttttattaaagattgtctttgcgccgagttcttgtgtaagt
aatacttttgaaagttgggagtcaacaggttagagagaccataggagcag
agccccagcctggtgggtggtggtggggagcccgacgaggggcggggctt
ggcaggagggcgtggccaggggcggggaccgcgcagaagtgctctgcagc
gccgggtatcgcgagagttgggcgggccgagccatcgcagcagtcaattc
ccccaccctcccgggaggagccgggggcctggactctgcaaattctgagc
tctcatcatggcggcggcggcggccgcggcggccgtcggggacccgcagc
cgccccagccggaggcgccggcgcaggggctggctttagacaaagcggcc
accgccgctcatctgaaggccgctctcagccggccggataaccgtgcggg
cgccgaggagctgcaggcgctgctggagagggtgctgaacgccgagcggc
cgctggccggggctgcgggcggcgaggaggcggcgggcggcggcggcggc
ggcccgggcgaggcggaggaggatgccctggagtggtgtaagtgccttct
ggccggcggcggcggctacgaggagtttctgcgcgggccgtgccgggcct
acgaccccgcggcgctctgcggccctggtctgggacggccaactttcgtg
gacctaccgctggctggacgtgccggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_69856976_69858071
seq2: B6Ng01-256D12.b_45_1142 (reverse)

seq1  AAATGT-GGGTTTGTATTGCCAGCTTGGTTGGTAAAGGGTTTATAGTGAC  49
      |||||| ||||||||||  ||||||    |||||||||| ||||||||||
seq2  AAATGTGGGGTTTGTATGCCCAGCT---GTGGTAAAGGGGTTATAGTGAC  47

seq1  CAGTGACTGAGAGTGGA-GGTAGGCTGCAGGCCACTGCATTGCCAT-GGT  97
      ||||||||||||||||| ||||||||||||||||||||||  |||| |||
seq2  CAGTGACTGAGAGTGGAGGGTAGGCTGCAGGCCACTGCATGCCCATGGGT  97

seq1  TTCTGTTCCTGAGAACC--GAAGTGATCTGGTGGCATCGTTATTTCACAG  145
      |||||||||||||||||   ||||||||||||||||||||||||||||||
seq2  TTCTGTTCCTGAGAACCCGAAAGTGATCTGGTGGCATCGTTATTTCACAG  147

seq1  GGTCATTCTGTTGACCTTTTAGTAGAGTAAGACGATAAATTACCAGGTTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATTCTGTTGACCTTTTAGTAGAGTAAGACGATAAATTACCAGGTTG  197

seq1  TTCAGAGGTGAAGAGACTCCAGACTACTTTTCTGATTGTAGAAGTCAGAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGGTGAAGAGACTCCAGACTACTTTTCTGATTGTAGAAGTCAGAA  247

seq1  AGTAGCTACTGCAAGAGTCGTTTGAGAGGAATCCATAGCCTTGGTGACCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTACTGCAAGAGTCGTTTGAGAGGAATCCATAGCCTTGGTGACCA  297

seq1  GATGCAGGTGACTTCTAATCTTAGATAAAATCATTGCATGTTCTAGTTCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGGTGACTTCTAATCTTAGATAAAATCATTGCATGTTCTAGTTCT  347

seq1  CATGGAACATGTTCCTGCTGTGTCTCATTGAGGTTCTGTCTTGGCAGTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAACATGTTCCTGCTGTGTCTCATTGAGGTTCTGTCTTGGCAGTCA  397

seq1  AGACATGTCACCGTCTTGCTTGTGTTTCCATTGTTGTGATATCATGAATC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTCACCGTCTTGCTTGTGTTTCCATTGTTGTGATATCATGAATC  447

seq1  TGCTACCTTGCTTCATTTGACACAAATATGTTTAAGTGTACTGCAGACTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCTTGCTTCATTTGACACAAATATGTTTAAGTGTACTGCAGACTT  497

seq1  TGAAGTGCCTGTAAGCATGCCTATCGCTGCTGCTTCTGTCCCTAGCAGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGCCTGTAAGCATGCCTATCGCTGCTGCTTCTGTCCCTAGCAGCA  547

seq1  GTACTGTCTTCTGTTGAATCTATGCTTTTTGAGGCTTGGCCTCTTCCAGC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTCTTCTGTTGAATCTATGCTTTTTGAGGCTTGGCCTCTTCCAGC  597

seq1  AAAAGTGTCTGCTAATCAATTTTCCTTACAGCCTTACCTCCTCCAACTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGTCTGCTAATCAATTTTCCTTACAGCCTTACCTCCTCCAACTCT  647

seq1  GCTGCTGCGTCACCCTCTTTAAGCATTGCTGTGTTTATATGGACAAGAGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCGTCACCCTCTTTAAGCATTGCTGTGTTTATATGGACAAGAGT  697

seq1  CAACCCAGGGCCTCCCGTGTGGTGAGCTCTGAATCCCAAGTGCTGCTGAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCAGGGCCTCCCGTGTGGTGAGCTCTGAATCCCAAGTGCTGCTGAG  747

seq1  CTTAGCGGCTGTTTATCATCTGTTGCTTTAATGAAGCCTTCACAGAACAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCGGCTGTTTATCATCTGTTGCTTTAATGAAGCCTTCACAGAACAG  797

seq1  AAATTCTTATTTTTCTTTGAATTTCCCAATTCCTAGAAAGTGTTTTACAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTATTTTTCTTTGAATTTCCCAATTCCTAGAAAGTGTTTTACAG  847

seq1  AAATTCGTTGGCTAATGAATATATGGAATTATAATGTGAATGGAGTAATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCGTTGGCTAATGAATATATGGAATTATAATGTGAATGGAGTAATA  897

seq1  TCTAGAAAAAAAATCACCAGTACTGTTTTATTCCTACAAGTAGTAAATAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAAAAAAAATCACCAGTACTGTTTTATTCCTACAAGTAGTAAATAC  947

seq1  AGCGTGCTCTGCAGGAATTATAGCTGGCTTTGAGTTTTCCATACGAAACA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGCTCTGCAGGAATTATAGCTGGCTTTGAGTTTTCCATACGAAACA  997

seq1  GGGAGTTTATTCAAAGAGTTTTAGGCCCTTAGCACTTACAGATACAAATA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTTTATTCAAAGAGTTTTAGGCCCTTAGCACTTACAGATACAAATA  1047

seq1  ATCTTGACAGCCTAAAGTATATGAACATAACATATTCAGGAGGGAGAATT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGACAGCCTAAAGTATATGAACATAACATATTCAGGAGGGAGAATT  1097

seq1  C  1096
      |
seq2  C  1098

seq1: chr2_69734845_69735764
seq2: B6Ng01-256D12.g_64_992

seq1  GAATTCAGTAGTAATTAAGTCTCTGATAACAGCAATCAACATCTGAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGTAATTAAGTCTCTGATAACAGCAATCAACATCTGAAGAC  50

seq1  CAGATATGGATGCCTAAAATACATCTGGTAGATGTTGTGTTTAATTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATGGATGCCTAAAATACATCTGGTAGATGTTGTGTTTAATTCCTA  100

seq1  TGTTCCAGGCAAATAAAGAAAAAAAAAACCCACTTATCTTTTTTCTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAGGCAAATAAAGAAAAAAAAAACCCACTTATCTTTTTTCTTTTT  150

seq1  ATTTATTCTTCTCTCATACATTACATACATCACATACATCCCGACTACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTCTTCTCTCATACATTACATACATCACATACATCCCGACTACAG  200

seq1  AGAAACCACTTTTATTAAAGATTGTCTTTGCGCCGAGTTCTTGTGTAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCACTTTTATTAAAGATTGTCTTTGCGCCGAGTTCTTGTGTAAGT  250

seq1  AATACTTTTGAAAGTTGGGAGTCAACAGGTTAGAGAGACCATAGGAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTTGAAAGTTGGGAGTCAACAGGTTAGAGAGACCATAGGAGCAG  300

seq1  AGCCCCAGCCTGGTGGGTGGTGGTGGGGAGCCCGACGAGGGGCGGGGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCAGCCTGGTGGGTGGTGGTGGGGAGCCCGACGAGGGGCGGGGCTT  350

seq1  GGCAGGAGGGCGTGGCCAGGGGCGGGGACCGCGCAGAAGTGCTCTGCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGGGCGTGGCCAGGGGCGGGGACCGCGCAGAAGTGCTCTGCAGC  400

seq1  GCCGGGTATCGCGAGAGTTGGGCGGGCCGAGCCATCGCAGCAGTCAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGGGTATCGCGAGAGTTGGGCGGGCCGAGCCATCGCAGCAGTCAATTC  450

seq1  CCCCACCCTCCCGGGAGGAGCCGGGGGCCTGGACTCTGCAAATTCTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCTCCCGGGAGGAGCCGGGGGCCTGGACTCTGCAAATTCTGAGC  500

seq1  TCTCATCATGGCGGCGGCGGCGGCCGCGGCGGCCGTCGGGGACCCGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCATGGCGGCGGCGGCGGCCGCGGCGGCCGTCGGGGACCCGCAGC  550

seq1  CGCCCCAGCCGGAGGCGCCGGCGCAGGGGCTGGCTTTAGACAAAGCGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCAGCCGGAGGCGCCGGCGCAGGGGCTGGCTTTAGACAAAGCGGCC  600

seq1  ACCGCCGCTCATCTGAAGGCCGCTCTCAGCCGGCCGGATAACCGTGCGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGCCGCTCATCTGAAGGCCGCTCTCAGCCGGCCGGATAACCGTGCGGG  650

seq1  CGCCGAGGAGCTGCAGGCGCTGCTGGAGAGGGTGCTGAACGCCGAGCGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGAGGAGCTGCAGGCGCTGCTGGAGAGGGTGCTGAACGCCGAGCGGC  700

seq1  CGCTGGCCGGGGCTGCGGGCGGCGAGGAGGCGGCGGGCGGCGGCGGCGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGCCGGGGCTGCGGGCGGCGAGGAGGCGGCGGGCGGCGGCGGCGGC  750

seq1  GGCCCGGGCGAGGCGGAGGAGGATGCCCTGGAGTGGTGTAAGTGCCTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGGGCGAGGCGGAGGAGGATGCCCTGGAGTGGTGTAAGTGCCTTCT  800

seq1  GGCCGGCGGCGGCGGCTACGAGGAG-TTCTGCGC-GGCCGTG-CGGGCCT  847
      ||||||||||||||||||||||||| |||||||| ||||||| |||||||
seq2  GGCCGGCGGCGGCGGCTACGAGGAGTTTCTGCGCGGGCCGTGCCGGGCCT  850

seq1  ACGACCCCGCGGCGCTCTGCGG-CCTGGTCT-GGACGGCCAAC-TTCGTG  894
      |||||||||||||||||||||| |||||||| ||||||||||| ||||||
seq2  ACGACCCCGCGGCGCTCTGCGGCCCTGGTCTGGGACGGCCAACTTTCGTG  900

seq1  G-CCTACCGCT-GCCGGACGTG-CGGCAT  920
      | ||||||||| || ||||||| ||||||
seq2  GACCTACCGCTGGCTGGACGTGCCGGCAT  929