BAC Information

Click to search

BAC

Clone NameB6Ng01-256G03
Chromosome2 (Build37)
Map Location 155,623,641 - 155,699,787
singlet/doubletdoublet
Overlap geneMmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik
Upstream geneRaly, Eif2s2, a, Ahcy, Itch, LOC100043877, LOC668931, Dynlrb1, Map1lc3a, Cdc91l1, Trp53inp2, Ncoa6, LOC668938, Ggtl3, Acss2, Gss, Myh7b, Trpc4ap, Edem2, Procr
Downstream geneGdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2, LOC100043677, 1110008F13Rik, Sla2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256G03.bB6Ng01-256G03.g
ACCGA062356GA062357
length1,0841,069
definitionB6Ng01-256G03.b B6Ng01-256G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,698,695 - 155,699,787)(155,623,641 - 155,624,727)
sequence
gaattctctctctctctccccctccctctcacatatcgtgacccaccagc
ttccctctactatgctaagcactagagatacaaggatgactaagacgtcc
tggtctagcagagggaaacaaacaaaattataatattgagaaactccggt
gtttcaatgactgaatgccagagaagagctcggggcagatggcatttggg
atggctttctgggcaagtgttacagagtgacgtgcaagggcaggaacttc
ctttgggtccttgttcctttgcctgttctggtgagagcaggttctctgta
gctccactctgatcctctgtccctctgaatgccctgcgaggtgattacag
gttcattgactccagagtctgaaaactggccacacagaatccctcttccc
tgttttgggttttgttgtttatcctgagatagggtctctttctgcagtcc
tggctgacctagagctctctaagtagaccaggttggcctcggccttttaa
ggcacttgccattcaagcttgatgacctgagttctatcccaggacccacg
gtggcaggagagaacccactcctgtgagatgatctctgacctctgcacat
atatacacacgcttaaaaaaaataaatgcaatcttttttactttaaaaaa
gaaagctatgtggaaggctttgttttcagcggccgcctgcccagccccca
gctgtcaggaggggtcattgtgcagctctttccacgctcactcttcgctt
cacttttactggagggcaaaactagggcagagaaataatttttattcact
tctgaaaggttacagtaataaagaaactcttgttaacatcagagaacgtt
gcagccaagagttttcacagtctggcattgtttattttacatgtaatttg
gaaccttctgcactcttaaatattggcacaagacgttttaactcttgcag
tacttcactggagcaacagctgtgtggtgtgagaggggcagccggccctg
agaactattcacttctctctggcgagagcaaatggggtgtgtctgtgtct
gtgggtgactctatgtgtgtcactggggtgtgtt
gaattcctgctggaggcacgcagagctggggtcccagaatctaagctgag
actgtattgctgtttatggggctagggactgggcagtgctgtcttagagt
gctcagtaaccacagtgtgtgtgtgtgtctgtgtgtgcttgtgtgccttc
tctctgcccaggtggatgaagaaacctcgatgtggcgtccctgatcatcc
ccacttgagcaggaggaggagaaataagcgatatgccctaactggacaga
agtggaggcagaaacacatcacctacaggtgctgcggccctctctcctct
tccttggtttgacccccagggtcactctgttcttcctttccaagcttctg
aggttcacatggtagttatgtctcgggaagtgtgagagtcaggacagagg
ccaggcacgtggacatcaagatgaggggctgagagcctgtgaacttgtct
tccttgtgacctccacaggtgactccaccctcaggtttcctggtttgcct
ggtcctttgggactcattagttgtgttctgtccagtcccctacagtttta
ctgaacatggggtatgaattgtttagttggtctgctctgtagagaccatg
ttagactagacttgctctgttagagaccatgttagacctgctcttagtgc
ttttacaaactgctccacctctgatggattcctagtttcagcctcacaga
cctcacccaagatgctcaatgcagagtctcacctgtttcttaaggagaat
aaagactaaagacaggggtcccaaccttgtcattccttgcctaagaaagc
cagtgcacacacagcagttctatctccagccccacagtcgctgagacaat
agtaatgaaacccaacacagaagagccagacatcaggctcacagagggct
tggacgaggaccaagctaggagaggctcataagctctgcttgactctctc
ccacactgacactcagatctctgggtacagtaacgactggggtaaagcga
acttttcttactgacaagatgtcaggatcagagcagatcattccttcctt
tctttttccaaaagagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_155698695_155699787
seq2: B6Ng01-256G03.b_45_1128 (reverse)

seq1  AACACA-CACAGTGACACACATAGAGTCACACACAGACACAGACACACCC  49
      |||||| | ||||||||||||||||||||| |||||||||||||||||||
seq2  AACACACCCCAGTGACACACATAGAGTCACCCACAGACACAGACACACCC  50

seq1  CATTTTGCTCTCGCCAGAAGGAAGAAGGTGAATAGTTCTCCAGGGCCCGG  99
      || |||||||||||||||  |||    |||||||||||| ||||| ||||
seq2  CA-TTTGCTCTCGCCAGAGAGAA----GTGAATAGTTCT-CAGGG-CCGG  93

seq1  CTGCCCCTCTCACACCACACAGCTGTTGCCTCCAGTGAAGTACTGCAAGA  149
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTGCCCCTCTCACACCACACAGCTGTTG-CTCCAGTGAAGTACTGCAAGA  142

seq1  GTTAAAACGTCTTTGTGCCAATATTTTAAGAGTGCAGAAGGTTCCAAATT  199
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  GTTAAAACGTC-TTGTGCCAATA-TTTAAGAGTGCAGAAGGTTCCAAATT  190

seq1  ACATGTAAAATAAACAATGCCAGACTGTGAAAACTCTTGGCTGCAACGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAAAATAAACAATGCCAGACTGTGAAAACTCTTGGCTGCAACGTT  240

seq1  CTCTGATGTTAACAAGAGTTTCTTTATTACTGTAACCTTTCAGAAGTGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGTTAACAAGAGTTTCTTTATTACTGTAACCTTTCAGAAGTGAA  290

seq1  TAAAAATTATTTCTCTGCCCTAGTTTTGCCCTCCAGTAAAAGTGAAGCGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTATTTCTCTGCCCTAGTTTTGCCCTCCAGTAAAAGTGAAGCGA  340

seq1  AGAGTGAGCGTGGAAAGAGCTGCACAATGACCCCTCCTGACAGCTGGGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGCGTGGAAAGAGCTGCACAATGACCCCTCCTGACAGCTGGGGG  390

seq1  CTGGGCAGGCGGCCGCTGAAAACAAAGCCTTCCACATAGCTTTCTTTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAGGCGGCCGCTGAAAACAAAGCCTTCCACATAGCTTTCTTTTTT  440

seq1  AAAGTAAAAAAGATTGCATTTATTTTTTTTAAGCGTGTGTATATATGTGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAAAAAGATTGCATTTATTTTTTTTAAGCGTGTGTATATATGTGC  490

seq1  AGAGGTCAGAGATCATCTCACAGGAGTGGGTTCTCTCCTGCCACCGTGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCAGAGATCATCTCACAGGAGTGGGTTCTCTCCTGCCACCGTGGG  540

seq1  TCCTGGGATAGAACTCAGGTCATCAAGCTTGAATGGCAAGTGCCTTAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGATAGAACTCAGGTCATCAAGCTTGAATGGCAAGTGCCTTAAAA  590

seq1  GGCCGAGGCCAACCTGGTCTACTTAGAGAGCTCTAGGTCAGCCAGGACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGAGGCCAACCTGGTCTACTTAGAGAGCTCTAGGTCAGCCAGGACTG  640

seq1  CAGAAAGAGACCCTATCTCAGGATAAACAACAAAACCCAAAACAGGGAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAGACCCTATCTCAGGATAAACAACAAAACCCAAAACAGGGAAG  690

seq1  AGGGATTCTGTGTGGCCAGTTTTCAGACTCTGGAGTCAATGAACCTGTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTCTGTGTGGCCAGTTTTCAGACTCTGGAGTCAATGAACCTGTAA  740

seq1  TCACCTCGCAGGGCATTCAGAGGGACAGAGGATCAGAGTGGAGCTACAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCGCAGGGCATTCAGAGGGACAGAGGATCAGAGTGGAGCTACAGA  790

seq1  GAACCTGCTCTCACCAGAACAGGCAAAGGAACAAGGACCCAAAGGAAGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGCTCTCACCAGAACAGGCAAAGGAACAAGGACCCAAAGGAAGTT  840

seq1  CCTGCCCTTGCACGTCACTCTGTAACACTTGCCCAGAAAGCCATCCCAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCTTGCACGTCACTCTGTAACACTTGCCCAGAAAGCCATCCCAAA  890

seq1  TGCCATCTGCCCCGAGCTCTTCTCTGGCATTCAGTCATTGAAACACCGGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTGCCCCGAGCTCTTCTCTGGCATTCAGTCATTGAAACACCGGA  940

seq1  GTTTCTCAATATTATAATTTTGTTTGTTTCCCTCTGCTAGACCAGGACGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCAATATTATAATTTTGTTTGTTTCCCTCTGCTAGACCAGGACGT  990

seq1  CTTAGTCATCCTTGTATCTCTAGTGCTTAGCATAGTAGAGGGAAGCTGGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCATCCTTGTATCTCTAGTGCTTAGCATAGTAGAGGGAAGCTGGT  1040

seq1  GGGTCACGATATGTGAGAGGGAGGGGGAGAGAGAGAGAGAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACGATATGTGAGAGGGAGGGGGAGAGAGAGAGAGAATTC  1084

seq1: chr2_155623641_155624727
seq2: B6Ng01-256G03.g_63_1131

seq1  GAATTCCTGCTGGAGGCACGCAGAGCTGGGGTCCCAGAATCTAAGCTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTGGAGGCACGCAGAGCTGGGGTCCCAGAATCTAAGCTGAG  50

seq1  ACTGTATTGCTGTTTATGGGGCTAGGGACTGGGCAGTGCTGTCTTAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATTGCTGTTTATGGGGCTAGGGACTGGGCAGTGCTGTCTTAGAGT  100

seq1  GCTCAGTAACCACAGTGTGTGTGTGTGTCTGTGTGTGCTTGTGTGCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTAACCACAGTGTGTGTGTGTGTCTGTGTGTGCTTGTGTGCCTTC  150

seq1  TCTCTGCCCAGGTGGATGAAGAAACCTCGATGTGGCGTCCCTGATCATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCCCAGGTGGATGAAGAAACCTCGATGTGGCGTCCCTGATCATCC  200

seq1  CCACTTGAGCAGGAGGAGGAGAAATAAGCGATATGCCCTAACTGGACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGAGCAGGAGGAGGAGAAATAAGCGATATGCCCTAACTGGACAGA  250

seq1  AGTGGAGGCAGAAACACATCACCTACAGGTGCTGCGGCCCTCTCTCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGGCAGAAACACATCACCTACAGGTGCTGCGGCCCTCTCTCCTCT  300

seq1  TCCTTGGTTTGACCCCCAGGGTCACTCTGTTCTTCCTTTCCAAGCTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGTTTGACCCCCAGGGTCACTCTGTTCTTCCTTTCCAAGCTTCTG  350

seq1  AGGTTCACATGGTAGTTATGTCTCGGGAAGTGTGAGAGTCAGGACAGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCACATGGTAGTTATGTCTCGGGAAGTGTGAGAGTCAGGACAGAGG  400

seq1  CCAGGCACGTGGACATCAAGATGAGGGGCTGAGAGCCTGTGAACTTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCACGTGGACATCAAGATGAGGGGCTGAGAGCCTGTGAACTTGTCT  450

seq1  TCCTTGTGACCTCCACAGGTGACTCCACCCTCAGGTTTCCTGGTTTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTGACCTCCACAGGTGACTCCACCCTCAGGTTTCCTGGTTTGCCT  500

seq1  GGTCCTTTGGGACTCATTAGTTGTGTTCTGTCCAGTCCCCTACAGTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTTTGGGACTCATTAGTTGTGTTCTGTCCAGTCCCCTACAGTTTTA  550

seq1  CTGAACATGGGGTATGAATTGTTTAGTTGGTCTGCTCTGTAGAGACCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACATGGGGTATGAATTGTTTAGTTGGTCTGCTCTGTAGAGACCATG  600

seq1  TTAGACTAGACTTGCTCTGTTAGAGACCATGTTAGACCTGCTCTTAGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTAGACTTGCTCTGTTAGAGACCATGTTAGACCTGCTCTTAGTGC  650

seq1  TTTTACAAACTGCTCCACCTCTGATGGATTCCTAGTTTCAGCCTCACAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACAAACTGCTCCACCTCTGATGGATTCCTAGTTTCAGCCTCACAGA  700

seq1  CCTCACCCAAGATGCTCAATGCAGAGTCTCACCTGTTTCTTAAGGAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCCAAGATGCTCAATGCAGAGTCTCACCTGTTTCTTAAGGAGAAT  750

seq1  AAAGACTAAAGACAGGGGTCCCAACCTTGTCATTCCTTGCCTAAGAAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTAAAGACAGGGGTCCCAACCTTGTCATTCCTTGCCTAAGAAAGC  800

seq1  CAGTGCACACACAGCAGGTTCTATCTCCAGCCCCACAGTCGCTGAGACAA  850
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGTGCACACACAGCA-GTTCTATCTCCAGCCCCACAGTCGCTGAGACAA  849

seq1  TAGTAATGAAACCCAACACAGAAGAGCCAGACATCAGGGCTCACAGAGGG  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAGTAATGAAACCCAACACAGAAGAGCCAGACATCA-GGCTCACAGAGGG  898

seq1  CTTGGACGAGGACCAAGCTAGGAGAGGCTCCAATAAGCTCTGCTTGACTC  950
      ||||||||||||||||||||||||||||||  ||||||||||||||||| 
seq2  CTTGGACGAGGACCAAGCTAGGAGAGGCTC--ATAAGCTCTGCTTGACT-  945

seq1  CTCTCCCAACACTGACCACCTCAGATTCTCTGGGTACAGTAAAAGGACCT  1000
      ||||||| ||||||||   |||||| ||||||||||||||  || || ||
seq2  CTCTCCC-ACACTGAC--ACTCAGA-TCTCTGGGTACAGT--AACGA-CT  988

seq1  GGGTTAAAGCGAAACTTTTCTTACTGACAAGATGTCAAGATCAGAGCAG-  1049
      ||| ||||||| ||||||||||||||||||||||||| ||||||||||| 
seq2  GGGGTAAAGCG-AACTTTTCTTACTGACAAGATGTCAGGATCAGAGCAGA  1037

seq1  -GATTCCTTTCTTTTCTTTTCTTTTTTCAAAAAGAGAAG  1087
        ||||||| ||||        |||||| ||||||||||
seq2  TCATTCCTTCCTTT-------CTTTTTCCAAAAGAGAAG  1069