BAC Information

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BAC

Clone NameB6Ng01-256N14
Chromosome2 (Build37)
Map Location 86,076,940 - 86,234,003
singlet/doubletdoublet
Overlap geneOlfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1
Upstream geneOlfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047
Downstream geneOlfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256N14.bB6Ng01-256N14.g
ACCGA062703GA062704
length3431,124
definitionB6Ng01-256N14.b B6Ng01-256N14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,076,940 - 86,077,282)(86,232,856 - 86,234,003)
sequence
atctggcactgttgagttcctgtggctcatttcaaccttctgaaaagaca
tgaaattcccaacaacttaagcatagaatcaatcaagcaaattcaaagac
aagataaaatgtcacatttacatggctcataggaaaatgatttatttaat
caactaacaggacaccatagagctcccagacattaaaccaccaaccaaag
aatgcacatgggtgggtccatggctcccattacatatgtagcagagaact
gccatatctggcatttatgcgaggggtcattcttagtcctgtggagcctt
tttgtcccagggaagggggatggtagaggggtgaagagggagt
gaattcattgatcaacagtttaagaaaaaaagatgtaaaaatgcttttag
aaagagaggcaaagttatgcacaataacttctcatgaagtcacagtttgt
taaaagttgccttagttcacaataaataattatgtatgctctataatttc
agtgaagaaaataggaaagaattattttctaaatcagagatagagtgtga
caaaattttaaaaagtaagtataacagaaaaatacttttaaaatatgtag
atctaagaaggtaacaatgtttactgacttaagtgttagctaattagatt
atttgaaaaataaaaaattagcctagaaacattaataaaggaatgagttt
tggtattacactaagaatattttgtgggtttgatatcaagttaatctgat
agctgaatagataaaagatgaaacttaatggagaaataactttttctact
gattgaaaattattatgtagttttaatttcaaagcaaatctaattaggta
gctaaagccaaatataactttaaaatgtctgtgtcaaacaaaacttttat
gagataataaaacatagcaagaactatgtaaatttaatatttatattgga
tatgaataatcaaatttagtcatttctggcatgagagattgagggagggc
cttgggcactcttggttaaagaacaatatcactggatctaaccatatgtg
atacaattaaaataaacaagcatgtaattagctattaaaacgtaatgaaa
aattgaatttcataacttgcccattactcggatactattttgttttaacg
gataatttgccaaaacatgtgtgaagagcaattcaacatcacaaaaactt
gtggtaacagtaatagtctctaaagtgttttaagtactgttcaaaatatt
tttctcgcagagaatggccacagaaaagactttcatgctgaaggactgca
gttttatgttatgtttgtttgttcactttgtcatttttgtttgtttatct
ctagattttacatcactcacacattttgcttggctaactctaacacagat
aaatgtgatatccctgggacatgtctttacggtttatccattgattagca
gtaataggtatataaatgacttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86076940_86077282
seq2: B6Ng01-256N14.b_52_394

seq1  ATCTGGCACTGTTGAGTTCCTGTGGCTCATTTCAACCTTCTGAAAAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGCACTGTTGAGTTCCTGTGGCTCATTTCAACCTTCTGAAAAGACA  50

seq1  TGAAATTCCCAACAACTTAAGCATAGAATCAATCAAGCAAATTCAAAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCCCAACAACTTAAGCATAGAATCAATCAAGCAAATTCAAAGAC  100

seq1  AAGATAAAATGTCACATTTACATGGCTCATAGGAAAATGATTTATTTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAAATGTCACATTTACATGGCTCATAGGAAAATGATTTATTTAAT  150

seq1  CAACTAACAGGACACCATAGAGCTCCCAGACATTAAACCACCAACCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAACAGGACACCATAGAGCTCCCAGACATTAAACCACCAACCAAAG  200

seq1  AATGCACATGGGTGGGTCCATGGCTCCCATTACATATGTAGCAGAGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACATGGGTGGGTCCATGGCTCCCATTACATATGTAGCAGAGAACT  250

seq1  GCCATATCTGGCATTTATGCGAGGGGTCATTCTTAGTCCTGTGGAGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATCTGGCATTTATGCGAGGGGTCATTCTTAGTCCTGTGGAGCCTT  300

seq1  TTTGTCCCAGGGAAGGGGGATGGTAGAGGGGTGAAGAGGGAGT  343
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCCAGGGAAGGGGGATGGTAGAGGGGTGAAGAGGGAGT  343

seq1: chr2_86232856_86234003
seq2: B6Ng01-256N14.g_65_1188 (reverse)

seq1  TGAAGTCATTTTATATACCTAATTAAACTTGTTTATATCAAT-GATAAAA  49
      |||||||| |||||||||||| |   |||  |    |||||| |||||| 
seq2  TGAAGTCA-TTTATATACCTATT---ACTGCT---AATCAATGGATAAAC  43

seq1  CGTAAAGACCATGTCCCAGGATTATTCCACATTTATCTTGTGGTTAGAAG  99
      |||||||| |||||||||||  |||  |||||||||| ||| ||||| ||
seq2  CGTAAAGA-CATGTCCCAGGGATAT--CACATTTATC-TGT-GTTAG-AG  87

seq1  TTAGCCCAAGCAAAATGTGGTGAGTGATTGTAAAAATCTAAGAGGATAAA  149
      |||| ||||||||||||| |||||||| ||| ||||||| ||| ||||||
seq2  TTAG-CCAAGCAAAATGT-GTGAGTGA-TGT-AAAATCT-AGA-GATAAA  131

seq1  ACAAAACAAAAATGACAAAAGTGAACAAACAAAACATAAACAATAAAACT  199
         ||||||||||||| ||||||||||||| ||||||||   ||||||||
seq2  --CAAACAAAAATGAC-AAAGTGAACAAAC-AAACATAA--CATAAAACT  175

seq1  GCAGTCCTTCAGCATGAAAGTCTTTTCTGTGGCCATTCTCTGCGAGAAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCTTCAGCATGAAAGTCTTTTCTGTGGCCATTCTCTGCGAGAAAA  225

seq1  ATATTTTGAACAGTACTTAAAACACTTTAGAGACTATTACTGTTACCACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGAACAGTACTTAAAACACTTTAGAGACTATTACTGTTACCACA  275

seq1  AGTTTTTGTGATGTTGAATTGCTCTTCACACATGTTTTGGCAAATTATCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTGTGATGTTGAATTGCTCTTCACACATGTTTTGGCAAATTATCC  325

seq1  GTTAAAACAAAATAGTATCCGAGTAATGGGCAAGTTATGAAATTCAATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAACAAAATAGTATCCGAGTAATGGGCAAGTTATGAAATTCAATTT  375

seq1  TTCATTACGTTTTAATAGCTAATTACATGCTTGTTTATTTTAATTGTATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACGTTTTAATAGCTAATTACATGCTTGTTTATTTTAATTGTATC  425

seq1  ACATATGGTTAGATCCAGTGATATTGTTCTTTAACCAAGAGTGCCCAAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGGTTAGATCCAGTGATATTGTTCTTTAACCAAGAGTGCCCAAGG  475

seq1  CCCTCCCTCAATCTCTCATGCCAGAAATGACTAAATTTGATTATTCATAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTCAATCTCTCATGCCAGAAATGACTAAATTTGATTATTCATAT  525

seq1  CCAATATAAATATTAAATTTACATAGTTCTTGCTATGTTTTATTATCTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATAAATATTAAATTTACATAGTTCTTGCTATGTTTTATTATCTCA  575

seq1  TAAAAGTTTTGTTTGACACAGACATTTTAAAGTTATATTTGGCTTTAGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTTTGTTTGACACAGACATTTTAAAGTTATATTTGGCTTTAGCT  625

seq1  ACCTAATTAGATTTGCTTTGAAATTAAAACTACATAATAATTTTCAATCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTAGATTTGCTTTGAAATTAAAACTACATAATAATTTTCAATCA  675

seq1  GTAGAAAAAGTTATTTCTCCATTAAGTTTCATCTTTTATCTATTCAGCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAAAGTTATTTCTCCATTAAGTTTCATCTTTTATCTATTCAGCTA  725

seq1  TCAGATTAACTTGATATCAAACCCACAAAATATTCTTAGTGTAATACCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTAACTTGATATCAAACCCACAAAATATTCTTAGTGTAATACCAA  775

seq1  AACTCATTCCTTTATTAATGTTTCTAGGCTAATTTTTTATTTTTCAAATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTCCTTTATTAATGTTTCTAGGCTAATTTTTTATTTTTCAAATA  825

seq1  ATCTAATTAGCTAACACTTAAGTCAGTAAACATTGTTACCTTCTTAGATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATTAGCTAACACTTAAGTCAGTAAACATTGTTACCTTCTTAGATC  875

seq1  TACATATTTTAAAAGTATTTTTCTGTTATACTTACTTTTTAAAATTTTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTTAAAAGTATTTTTCTGTTATACTTACTTTTTAAAATTTTGT  925

seq1  CACACTCTATCTCTGATTTAGAAAATAATTCTTTCCTATTTTCTTCACTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCTATCTCTGATTTAGAAAATAATTCTTTCCTATTTTCTTCACTG  975

seq1  AAATTATAGAGCATACATAATTATTTATTGTGAACTAAGGCAACTTTTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATAGAGCATACATAATTATTTATTGTGAACTAAGGCAACTTTTAA  1025

seq1  CAAACTGTGACTTCATGAGAAGTTATTGTGCATAACTTTGCCTCTCTTTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGTGACTTCATGAGAAGTTATTGTGCATAACTTTGCCTCTCTTTC  1075

seq1  TAAAAGCATTTTTACATCTTTTTTTCTTAAACTGTTGATCAATGAATTC  1148
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCATTTTTACATCTTTTTTTCTTAAACTGTTGATCAATGAATTC  1124