BAC Information

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BAC

Clone NameB6Ng01-256P09
Chromosome2 (Build37)
Map Location 45,447,890 - 45,448,910
singlet/doubletsinglet
Overlap genenone
Upstream geneGtdc1, Zeb2
Downstream geneLOC100042661, LOC100041337, LOC666604, LOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256P09.bB6Ng01-256P09.g
ACCGA062786GA062787
length1711,022
definitionB6Ng01-256P09.b B6Ng01-256P09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtttagctctgagcctcattttttaatggggttatttgattttctgg
agtccaccttcttgagctcgtatctctagctgcatatgtagcagaagatg
gactagtcggccatcattgggaagagagaccgccttggtcttgcaaactt
tatatgcctcagtacagggga

gaattctagatatgtagaattgctacgtttgcagaggacctgggttcagt
tattaaaacccacatgaaagctcataatcttctgtatctcaggttctaga
aaatatgatgccttcttctggcctctgcaggtatcaggcaagcatgtggt
atatatacatatctgtaggtaaaaagagaaatcataaacataaaaataat
ctttaaaaattacagcagcgaagagagaactaataatcaactaataaaca
actaatctagatattgtattgttgttacacatttaaatgtattttacttt
ttgttttaacttctttttttctttttgaggcctttgaccagtgattcatt
gaaagaatgtgacttgtgagtagcaggaggagttactgttcagcagaaag
cctgacattcccagactctatgataacaatgaccacaggttctatttccc
aataataaaagttttgaccctgtaaaatgagtgtaatattattaattttg
tttgcgtgcttgaaaaaagatcccaagctattgccttcaatgttttaaga
gaagaaagccatagaggcatggacagagttagggttacgcttctcgctct
gtgctccatattaacagagagaaaaaacgacattgtcttttttactaaag
gaatggctcaatgttccccgagtatttgggtggaattttgtattaattag
ggtttatatttacataatgaaacaccttgaccaaaagcagcttgggagaa
agagtttatttttctatattctcatatcactgctcattatcaggagaagt
aagggcaggacagacactgaaacaggagcttgatggcaggagctgattcc
tctatgaggccatagaggagtactgcttgctgacttgttccccatagctt
actcagcctactttattataacacccaggactaccaacccaggggttgca
cttactcacatgggctggagttcctgccacatcaaacctataagggttgc
ctggatctttggagtattttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_45447890_45448910
seq2: B6Ng01-256P09.g_66_1087

seq1  GAATTCTAGATATGTAGAATTGCTACGTTTGCAGAGGACCTGGGTTCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATATGTAGAATTGCTACGTTTGCAGAGGACCTGGGTTCAGT  50

seq1  TATTAAAACCCACATGAAAGCTCATAATCTTCTGTATCTCAGGTTCTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAACCCACATGAAAGCTCATAATCTTCTGTATCTCAGGTTCTAGA  100

seq1  AAATATGATGCCTTCTTCTGGCCTCTGCAGGTATCAGGCAAGCATGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGATGCCTTCTTCTGGCCTCTGCAGGTATCAGGCAAGCATGTGGT  150

seq1  ATATATACATATCTGTAGGTAAAAAGAGAAATCATAAACATAAAAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACATATCTGTAGGTAAAAAGAGAAATCATAAACATAAAAATAAT  200

seq1  CTTTAAAAATTACAGCAGCGAAGAGAGAACTAATAATCAACTAATAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAAATTACAGCAGCGAAGAGAGAACTAATAATCAACTAATAAACA  250

seq1  ACTAATCTAGATATTGTATTGTTGTTACACATTTAAATGTATTTTACTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATCTAGATATTGTATTGTTGTTACACATTTAAATGTATTTTACTTT  300

seq1  TTGTTTTAACTTCTTTTTTTCTTTTTGAGGCCTTTGACCAGTGATTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAACTTCTTTTTTTCTTTTTGAGGCCTTTGACCAGTGATTCATT  350

seq1  GAAAGAATGTGACTTGTGAGTAGCAGGAGGAGTTACTGTTCAGCAGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATGTGACTTGTGAGTAGCAGGAGGAGTTACTGTTCAGCAGAAAG  400

seq1  CCTGACATTCCCAGACTCTATGATAACAATGACCACAGGTTCTATTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACATTCCCAGACTCTATGATAACAATGACCACAGGTTCTATTTCCC  450

seq1  AATAATAAAAGTTTTGACCCTGTAAAATGAGTGTAATATTATTAATTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAAAGTTTTGACCCTGTAAAATGAGTGTAATATTATTAATTTTG  500

seq1  TTTGCGTGCTTGAAAAAAGATCCCAAGCTATTGCCTTCAATGTTTTAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCGTGCTTGAAAAAAGATCCCAAGCTATTGCCTTCAATGTTTTAAGA  550

seq1  GAAGAAAGCCATAGAGGCATGGACAGAGTTAGGGTTACGCTTCTCGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGCCATAGAGGCATGGACAGAGTTAGGGTTACGCTTCTCGCTCT  600

seq1  GTGCTCCATATTAACAGAGAGAAAAAACGACATTGTCTTTTTTACTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCATATTAACAGAGAGAAAAAACGACATTGTCTTTTTTACTAAAG  650

seq1  GAATGGCTCAATGTTCCCCGAGTATTTGGGTGGAATTTTGTATTAATTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCTCAATGTTCCCCGAGTATTTGGGTGGAATTTTGTATTAATTAG  700

seq1  GGTTTATATTTACATAATGAAACACCTTGACCAAAAGCAGCTTGGGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATATTTACATAATGAAACACCTTGACCAAAAGCAGCTTGGGAGAA  750

seq1  AGAGTTTATTTTTCTATATTCTCATATCACTGCTCATTATCAGGAGAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTATTTTTCTATATTCTCATATCACTGCTCATTATCAGGAGAAGT  800

seq1  AAGGGCAGGACAGACACTGAAACAGGAGCTTGATGGCAGGAGCTGATTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAGGACAGACACTGAAACAGGAGCTTGATGGCAGGAGCTGATTCC  850

seq1  TCTATGAGGCCATAGAGGAGTACTGCTTGCTGACTTGTTCCCCATAGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGGCCATAGAGGAGTACTGCTTGCTGACTTGTTCCCCATAGCTT  900

seq1  ACTCAGCCTACTTTATTATAACACCCAGGACTACCAACCCAGGGGTTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCCTACTTTATTATAACACCCAGGACTACCAACCCAGGGGTTGCA  950

seq1  C-TACTCACAATGGGCT-GAG-TCCTGCCACATC-AACCTAT-AGGTTTG  995
      | ||||||| ||||||| ||| |||||||||||| ||||||| ||| |||
seq2  CTTACTCAC-ATGGGCTGGAGTTCCTGCCACATCAAACCTATAAGGGTTG  999

seq1  CCTTGGATCTTTTGGAAGTATTTTCT  1021
      || |||||||||  | ||||||||||
seq2  CC-TGGATCTTT--GGAGTATTTTCT  1022


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