BAC Information

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BAC

Clone NameB6Ng01-256P23
Chromosome2 (Build37)
Map Location 133,328,801 - 133,518,997
singlet/doubletdoublet
Overlap geneBmp2
Upstream gene1700026D11Rik, Prei4, LOC100043781, LOC383801, LOC668906, Chgb, 3300001M20Rik, Mcm8, Crls1, B430119L13Rik, 5830467P10Rik, LOC668908, LOC100043785, A430048G15Rik
Downstream geneHao1, Txndc13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256P23.bB6Ng01-256P23.g
ACCGA062812GA062813
length1,1191,084
definitionB6Ng01-256P23.b B6Ng01-256P23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,328,801 - 133,329,917)(133,517,906 - 133,518,997)
sequence
gaattctcacaggtgcctctatctccatcagaatgaggacaatgtctcag
tagaatggttgctggaggggctgtcaaagtgatgccacttagcttgtatt
gtctgtttaaccagtttgcataccacttgttctgggggataacagaggag
caggtaatgcctactaatgagatatgaagggagattttgtgccagacatt
tggcagttacctgaaggaacaaaggataaaggcatcattattatttgcaa
agaaatggctctcttgacttgtacttccattgcttctgttcaggggtgcc
tttgtggtccattttcataacatttcatctatccaaagcactatagtaag
acaaaaatcccaccaaccacaagtgaggaaacattccatctcctgctggc
ttttgggacaattcactgcattcgccatggctctgactgcagatatgaat
aggtacaattttcagagttttatatttaattctgattctattcatattct
aataaggagggggattttcttcagtgaataggaaaatacttaaatatcca
acaggaatatattgtgtttctattttgtgaaagcctcaagataagccagc
tgtggaaggtttcttcatgtctgcctggtctcattgcagagattcttaat
ttcctattgctgtttgatttcatactctttcctgtagcgttgaatagctt
ctttctttgaatttaatttgtcggtaagttgaggcacagaaaatggaagc
agattgcctatgtgccaatcttcctgtgctctttaactgcaaacatgaag
aatgaggccaagttcacagggcatccaagtttcgtgttgtactctgtggc
cctggtgccacaaaggagttggcattttctgcacctctgctcttgcagta
tacagtggattccatcaggacccagtttcgccatcaacagtgcatacatt
agggatgagtgattgtcctaatctaacttgagaggacttactcagattag
aatgggctaaagtccccagggatttgctccacactcttctgttgggaaaa
gtccctcctatctgacggttcctcacatttccagccaataccttatgttg
cttagaggacttcccatga
gaattccttctcatcaccaaccttaatcacttttgttcctagaaaaaaat
tatcaaatgcagtcgtggtggccaagataaatatgtatgaaagcaccaca
aggagtccacttcaccagggagggaaaatattggaacatttgaaaacatc
tgcaagcatgaaatgagaaattaccagatcaaagaggagtctagttacaa
ggtcagctaagcaattaatagtagaagagaaagagtctcatagaaactca
gaagtattcattattccttcctgtgtggaaacagcagggtccatgtttaa
aaacaaggcaaagaaatagaacaagtactacttttgaataaagcaagctg
gcatacaatgacctgacacataaagacatctgattccaaagattattcag
gaggattggtgactcacaggaaaccaggaaccagggctcttaatggcatt
tggtgggagtctggcaatcttctatgaagtaataaccagagcattatcaa
taggttaactatgatatttggagagaacattcaggtagaaatacttagaa
acgttaagtgagtcatttggagcatatttaaaatgctctggaacagatgg
cagtcagtctgctccgggacagatggcagtctgcacctgcagaagcagac
atgttaaggggttcatcaagagtttgttctaaaattttcacttttccagt
aatttatattttttcattcacagaagaattcactgttttgagaactgaga
tcacaagcaaatgagcagttacctaacacatttctcccatcaatttccta
accctgatattgttgaaaggcagtggagttcacaaagaccaccatgactt
aatgagatagctttccctttaagtaaaggaatcctcatgcattgatctag
tacttaacttactacatgcatgtacctagatactttcaacaacacaggta
ctattaaaaactattattacagtgtgataagtgctcagatgagcagatta
ttttcatatgaaatgtatatcatagtccagctgtagttagggaatcagga
tgtatcttgatgaaaaaaaaatctttcaaactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_133328801_133329917
seq2: B6Ng01-256P23.b_47_1165

seq1  GAATTCTCACAGGTGCCTCTATCTCCATCAGAATGAGGACAATGTCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAGGTGCCTCTATCTCCATCAGAATGAGGACAATGTCTCAG  50

seq1  TAGAATGGTTGCTGGAGGGGCTGTCAAAGTGATGCCACTTAGCTTGTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGGTTGCTGGAGGGGCTGTCAAAGTGATGCCACTTAGCTTGTATT  100

seq1  GTCTGTTTAACCAGTTTGCATACCACTTGTTCTGGGGGATAACAGAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTAACCAGTTTGCATACCACTTGTTCTGGGGGATAACAGAGGAG  150

seq1  CAGGTAATGCCTACTAATGAGATATGAAGGGAGATTTTGTGCCAGACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTAATGCCTACTAATGAGATATGAAGGGAGATTTTGTGCCAGACATT  200

seq1  TGGCAGTTACCTGAAGGAACAAAGGATAAAGGCATCATTATTATTTGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTTACCTGAAGGAACAAAGGATAAAGGCATCATTATTATTTGCAA  250

seq1  AGAAATGGCTCTCTTGACTTGTACTTCCATTGCTTCTGTTCAGGGGTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGGCTCTCTTGACTTGTACTTCCATTGCTTCTGTTCAGGGGTGCC  300

seq1  TTTGTGGTCCATTTTCATAACATTTCATCTATCCAAAGCACTATAGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGTCCATTTTCATAACATTTCATCTATCCAAAGCACTATAGTAAG  350

seq1  ACAAAAATCCCACCAACCACAAGTGAGGAAACATTCCATCTCCTGCTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATCCCACCAACCACAAGTGAGGAAACATTCCATCTCCTGCTGGC  400

seq1  TTTTGGGACAATTCACTGCATTCGCCATGGCTCTGACTGCAGATATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGACAATTCACTGCATTCGCCATGGCTCTGACTGCAGATATGAAT  450

seq1  AGGTACAATTTTCAGAGTTTTATATTTAATTCTGATTCTATTCATATTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAATTTTCAGAGTTTTATATTTAATTCTGATTCTATTCATATTCT  500

seq1  AATAAGGAGGGGGATTTTCTTCAGTGAATAGGAAAATACTTAAATATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGAGGGGGATTTTCTTCAGTGAATAGGAAAATACTTAAATATCCA  550

seq1  ACAGGAATATATTGTGTTTCTATTTTGTGAAAGCCTCAAGATAAGCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAATATATTGTGTTTCTATTTTGTGAAAGCCTCAAGATAAGCCAGC  600

seq1  TGTGGAAGGTTTCTTCATGTCTGCCTGGTCTCATTGCAGAGATTCTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAGGTTTCTTCATGTCTGCCTGGTCTCATTGCAGAGATTCTTAAT  650

seq1  TTCCTATTGCTGTTTGATTTCATACTCTTTCCTGTAGCGTTGAATAGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATTGCTGTTTGATTTCATACTCTTTCCTGTAGCGTTGAATAGCTT  700

seq1  CTTTCTTTGAATTTAATTTGTCGGTAAGTTGAGGCACAGAAAATGGAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTGAATTTAATTTGTCGGTAAGTTGAGGCACAGAAAATGGAAGC  750

seq1  AGATTGCCTATGTGCCAATCTTCCTGTGCTCTTTAACTGCAAACATGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCCTATGTGCCAATCTTCCTGTGCTCTTTAACTGCAAACATGAAG  800

seq1  AATGAGGCCAAGTTCACAGGGCATCCAAGTTTCGTGTTGTACTCTGTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGCCAAGTTCACAGGGCATCCAAGTTTCGTGTTGTACTCTGTGGC  850

seq1  CCTGGTGCCACAAAGGAGTTGGCATTTTCTGCACCTCTGCTCTTGCAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGCCACAAAGGAGTTGGCATTTTCTGCACCTCTGCTCTTGCAGTA  900

seq1  TACAGTGGATTCCATCAGGACCCAGTTTCGCCATCAAACAGTGCATACAT  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TACAGTGGATTCCATCAGGACCCAGTTTCGCCATC-AACAGTGCATACAT  949

seq1  TAGGGATGAGTGATTGTCCTAATCTAACTTGAGAGGACTTTACTCAGATT  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAGGGATGAGTGATTGTCCTAATCTAACTTGAGAGGAC-TTACTCAGATT  998

seq1  AGAATGGGCTAAAGTCCCCAGGGAATTGCT-CACACTCTTCTGTTGGGAA  1049
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  AGAATGGGCTAAAGTCCCCAGGGATTTGCTCCACACTCTTCTGTTGGGAA  1048

seq1  AAGTCCCTCCTAATCTGACGTTTCCTCACA-TTCCAG-CAATACCTTATG  1097
      ||||||||||| |||||||| ||||||||| |||||| ||||||||||||
seq2  AAGTCCCTCCT-ATCTGACGGTTCCTCACATTTCCAGCCAATACCTTATG  1097

seq1  TTGCTAAGA-GACTT-CCATGA  1117
      ||||| ||| ||||| ||||||
seq2  TTGCTTAGAGGACTTCCCATGA  1119

seq1: chr2_133517906_133518997
seq2: B6Ng01-256P23.g_67_1150 (reverse)

seq1  TGAGTTTTTAAAGATTTTTTTTTCATTAAAGATAACCTTCTTGATTTCCC  50
      |||| ||| |||||||||||||||| | ||||||  | || ||| |||||
seq2  TGAG-TTTGAAAGATTTTTTTTTCA-TCAAGATA--CATCCTGA-TTCCC  45

seq1  TAAACTACAGCTGGACTATGATATACATTTCATATG-AAATAATCCTGCT  99
      | |||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  T-AACTACAGCTGGACTATGATATACATTTCATATGAAAATAAT-CTGCT  93

seq1  CCTTCTGAGCACTTATCACAACTGTAATTAATAGTTTTTAATAGTACCTG  149
       | |||||||||||||||| ||||||| ||||||||||||||||||||||
seq2  -CATCTGAGCACTTATCAC-ACTGTAA-TAATAGTTTTTAATAGTACCTG  140

seq1  TGTTGTTGAAAAGTATCTAGGTACATGCATGTAGTAAGTTAAGTACTAGA  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTG-AAAGTATCTAGGTACATGCATGTAGTAAGTTAAGTACTAGA  189

seq1  TCAATGCATGAGGATTCC-TTACTT-AAGGGAAAGCTATCTCATTAAGTC  247
      |||||||||||||||||| |||||| ||||||||||||||||||||||||
seq2  TCAATGCATGAGGATTCCTTTACTTAAAGGGAAAGCTATCTCATTAAGTC  239

seq1  ATGGTGGTCTTTGTGAACTCCACTGCCTTTCAACAATATCAGGGTTAGGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGTCTTTGTGAACTCCACTGCCTTTCAACAATATCAGGGTTAGGA  289

seq1  AATTGATGGGAGAAATGTGTTAGGTAACTGCTCATTTGCTTGTGATCTCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATGGGAGAAATGTGTTAGGTAACTGCTCATTTGCTTGTGATCTCA  339

seq1  GTTCTCAAAACAGTGAATTCTTCTGTGAATGAAAAAATATAAATTACTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAAAACAGTGAATTCTTCTGTGAATGAAAAAATATAAATTACTGG  389

seq1  AAAAGTGAAAATTTTAGAACAAACTCTTGATGAACCCCTTAACATGTCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGAAAATTTTAGAACAAACTCTTGATGAACCCCTTAACATGTCTG  439

seq1  CTTCTGCAGGTGCAGACTGCCATCTGTCCCGGAGCAGACTGACTGCCATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCAGGTGCAGACTGCCATCTGTCCCGGAGCAGACTGACTGCCATC  489

seq1  TGTTCCAGAGCATTTTAAATATGCTCCAAATGACTCACTTAACGTTTCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAGAGCATTTTAAATATGCTCCAAATGACTCACTTAACGTTTCTA  539

seq1  AGTATTTCTACCTGAATGTTCTCTCCAAATATCATAGTTAACCTATTGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTCTACCTGAATGTTCTCTCCAAATATCATAGTTAACCTATTGAT  589

seq1  AATGCTCTGGTTATTACTTCATAGAAGATTGCCAGACTCCCACCAAATGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCTGGTTATTACTTCATAGAAGATTGCCAGACTCCCACCAAATGC  639

seq1  CATTAAGAGCCCTGGTTCCTGGTTTCCTGTGAGTCACCAATCCTCCTGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGAGCCCTGGTTCCTGGTTTCCTGTGAGTCACCAATCCTCCTGAA  689

seq1  TAATCTTTGGAATCAGATGTCTTTATGTGTCAGGTCATTGTATGCCAGCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTGGAATCAGATGTCTTTATGTGTCAGGTCATTGTATGCCAGCT  739

seq1  TGCTTTATTCAAAAGTAGTACTTGTTCTATTTCTTTGCCTTGTTTTTAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATTCAAAAGTAGTACTTGTTCTATTTCTTTGCCTTGTTTTTAAA  789

seq1  CATGGACCCTGCTGTTTCCACACAGGAAGGAATAATGAATACTTCTGAGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGACCCTGCTGTTTCCACACAGGAAGGAATAATGAATACTTCTGAGT  839

seq1  TTCTATGAGACTCTTTCTCTTCTACTATTAATTGCTTAGCTGACCTTGTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGAGACTCTTTCTCTTCTACTATTAATTGCTTAGCTGACCTTGTA  889

seq1  ACTAGACTCCTCTTTGATCTGGTAATTTCTCATTTCATGCTTGCAGATGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACTCCTCTTTGATCTGGTAATTTCTCATTTCATGCTTGCAGATGT  939

seq1  TTTCAAATGTTCCAATATTTTCCCTCCCTGGTGAAGTGGACTCCTTGTGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATGTTCCAATATTTTCCCTCCCTGGTGAAGTGGACTCCTTGTGG  989

seq1  TGCTTTCATACATATTTATCTTGGCCACCACGACTGCATTTGATAATTTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCATACATATTTATCTTGGCCACCACGACTGCATTTGATAATTTT  1039

seq1  TTTCTAGGAACAAAAGTGATTAAGGTTGGTGATGAGAAGGAATTC  1092
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGGAACAAAAGTGATTAAGGTTGGTGATGAGAAGGAATTC  1084