BAC Information

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BAC

Clone NameB6Ng01-257F16
Chromosome2 (Build37)
Map Location 108,474,070 - 108,475,016
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043078, LOC668790
Downstream geneLOC623003, LOC100043423, LOC623031, Mett5d1, Kif18a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257F16.bB6Ng01-257F16.g
ACCGA063076GA063077
length9521,160
definitionB6Ng01-257F16.b B6Ng01-257F16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtttcttcagggatctttcttgaccacccagaactacagctgt
caaactgtccctggaacacctcattgtgttaagatgcttctgaaactacg
ttactaattcctaccagaatttattccctgagggcagagtgatacctttc
taagttagggtttatattgctgtgataaagcaccaagaccaaacagcaat
ataaaccctaacttagaaatcttagggagtaaagtgttgatttcagattg
aatttacaggtaacagtatcactacgagaaaacagagtgggaacctgaag
ccagacactgaagcataagtcatgatggagtgctattttactagcttgtt
cctcatggcttactcaacctgctttttataccaccgaggaccagggtcct
atgcctggatcccttcatgataatcatttttaggtaaatgctcttaaact
cttttccatgagcagtctgatggacaagtgttctcaattgaggctcctct
tgagcgataactctaactcgtgcaaagctgacaaaaatctagctaggaca
gcttccagttactgcctgccaaataagtgatttatgtggacccacacaga
caatatacggtgtccgtttatgagtaacttcatatcatagaaacaggata
ttcatggaattcatgtcctcacatctatgaagattccaaagggcaaggaa
ggtgaagaattcacaaaatttgggtaagtttcctaataagacatctaaaa
tataaggacttaattggatattgattctttaaattagaaaaagctgcatt
ctcataaaaacatacagcacagtatccgcactggcctaaaaggttttaag
atcgcttgctcccttttggtttctacattccattttctccactgaaatct
gaattgctttgattcagaacttttgggtttagtctgacccttttggtctg
ac

gaattctgtttagctctttaccccattatttttattgttttttttttggt
tatcttttagaggttagtttcctgtgttctttatatattttatatactga
ccctgtatcagttgtggggttagtgaacagtttttccaattcataggttg
gtgatttgtcttattgactatttcccatgctttacagatgcttttcaatt
tcattttcataaggtaccacctgtcagttcttcatcttagaacctaagcc
attgaaattctgtttaggaaaatttcccccttgtcaatgagtttgaagtt
ctttcctcctttctctcctattagattcagtgtgtctggttttatgttga
tgagcacttggactagagctttgtgcaatgtgacaaatatggatctactt
tcaattttctacataccaactgccagttagtccagcactaactttctttt
ttcttttcattgtatatttttggctcatttgtcaaagatcaagtatccat
aagtgagtggttttatttccaggtcttcaattctattccattgatcaatg
tgtctttctctgtaccaataccatacagtttttatcattgttgctctgta
gtaaagcttgaggtcagagatcatgatttacccagttttttttattatta
agaattgttttcaatattcagggatttttatttttccatatgacattgag
aattgttcttttcatgtctttgaagaattgtgttggaatcttgatgggga
ttgcattgagtctgtagactgctttcagtaagatgggcatttttactatg
ttgattctaccaatccatgaggaaggaaaatctctccattttctgagatc
ttcttcgattctttcttgaaaggccacaaccaaaagcagcatggcataat
aattatgaagttgcagtagtatcaacatatgacttagttgaacttaaaac
tcacttaacagagggaaatcatgcaaagtattgggaaaactagccagtta
cccagggctagtgaagttatggaataacacaaacagccactttacttaaa
tgagttctaaccttaagcctaacctatattctatcattggttcctatact
accaagtgcatggcaccacctctcaatctaggaaaacaatgtcctttgaa
cagccaatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108474070_108475016
seq2: B6Ng01-257F16.b_48_999 (reverse)

seq1  GTCAGACCAAAA-GGTCAGACTAAACCC-AAAGTTCTGGAATCAAAGCAA  48
      |||||||||||| ||||||||||||||| |||||||| ||||||||||||
seq2  GTCAGACCAAAAGGGTCAGACTAAACCCAAAAGTTCT-GAATCAAAGCAA  49

seq1  -TCAGA-TTCAGTGGAG-AAATGGAATGTAGAAACCAAAAGGGAGCAAGC  95
       ||||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  TTCAGATTTCAGTGGAGAAAATGGAATGTAGAAACCAAAAGGGAGCAAGC  99

seq1  GATCTTAAAACCTTTTAGGCCAGTGCGGATACTGTGCTGTATGTTTTTAT  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTAAAACCTTTTAGGCCAGTGCGGATACTGTGCTGTATGTTTTTAT  149

seq1  GAGAATGCAGC-TTTTCTAATTTAAAGAATCAATATCCAATTAAGTCCTT  194
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGCAGCTTTTTCTAATTTAAAGAATCAATATCCAATTAAGTCCTT  199

seq1  ATATTTTAGATGTCTTATTAGGAAACTTACCCAAATTTTGTGAATTCTTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTAGATGTCTTATTAGGAAACTTACCCAAATTTTGTGAATTCTTC  249

seq1  ACCTTCCTTGCCCTTTGGAATCTTCATAGATGTGAGGACATGAATTCCAT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTTGCCCTTTGGAATCTTCATAGATGTGAGGACATGAATTCCAT  299

seq1  GAATATCCTGTTTCTATGATATGAAGTTACTCATAAACGGACACCGTATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCCTGTTTCTATGATATGAAGTTACTCATAAACGGACACCGTATA  349

seq1  TTGTCTGTGTGGGTCCACATAAATCACTTATTTGGCAGGCAGTAACTGGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGTGTGGGTCCACATAAATCACTTATTTGGCAGGCAGTAACTGGA  399

seq1  AGCTGTCCTAGCTAGATTTTTGTCAGCTTTGCACGAGTTAGAGTTATCGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCCTAGCTAGATTTTTGTCAGCTTTGCACGAGTTAGAGTTATCGC  449

seq1  TCAAGAGGAGCCTCAATTGAGAACACTTGTCCATCAGACTGCTCATGGAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGGAGCCTCAATTGAGAACACTTGTCCATCAGACTGCTCATGGAA  499

seq1  AAGAGTTTAAGAGCATTTACCTAAAAATGATTATCATGAAGGGATCCAGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTTAAGAGCATTTACCTAAAAATGATTATCATGAAGGGATCCAGG  549

seq1  CATAGGACCCTGGTCCTCGGTGGTATAAAAAGCAGGTTGAGTAAGCCATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGACCCTGGTCCTCGGTGGTATAAAAAGCAGGTTGAGTAAGCCATG  599

seq1  AGGAACAAGCTAGTAAAATAGCACTCCATCATGACTTATGCTTCAGTGTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAAGCTAGTAAAATAGCACTCCATCATGACTTATGCTTCAGTGTC  649

seq1  TGGCTTCAGGTTCCCACTCTGTTTTCTCGTAGTGATACTGTTACCTGTAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCAGGTTCCCACTCTGTTTTCTCGTAGTGATACTGTTACCTGTAA  699

seq1  ATTCAATCTGAAATCAACACTTTACTCCCTAAGATTTCTAAGTTAGGGTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATCTGAAATCAACACTTTACTCCCTAAGATTTCTAAGTTAGGGTT  749

seq1  TATATTGCTGTTTGGTCTTGGTGCTTTATCACAGCAATATAAACCCTAAC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGCTGTTTGGTCTTGGTGCTTTATCACAGCAATATAAACCCTAAC  799

seq1  TTAGAAAGGTATCACTCTGCCCTCAGGGAATAAATTCTGGTAGGAATTAG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGGTATCACTCTGCCCTCAGGGAATAAATTCTGGTAGGAATTAG  849

seq1  TAACGTAGTTTCAGAAGCATCTTAACACAATGAGGTGTTCCAGGGACAGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTAGTTTCAGAAGCATCTTAACACAATGAGGTGTTCCAGGGACAGT  899

seq1  TTGACAGCTGTAGTTCTGGGTGGTCAAGAAAGATCCCTGAAGAAACAGAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGCTGTAGTTCTGGGTGGTCAAGAAAGATCCCTGAAGAAACAGAA  949

seq1  TTC  947
      |||
seq2  TTC  952


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