BAC Information

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BAC

Clone NameB6Ng01-258A13
Chromosome2 (Build37)
Map Location 142,893,776 - 142,894,859
singlet/doubletsinglet
Overlap geneSnrpb2
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneOtor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258A13.bB6Ng01-258A13.g
ACCGA063577GA063578
length1,2161,080
definitionB6Ng01-258A13.b B6Ng01-258A13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatatgaaatttgagacgagccaaatcagtcttgaaaaggaaaag
aaccacaaacggaatgaaactttctgatttcaaaccatgatgtaaggcag
cttggtaccaccattttgacaacatctagatttgggaacagactagagtt
cagtcataaatgagtttttatgtttatgatcagttgattttcaacaaggg
tcccaagaatacatggacatgagaaataaatgatcttagaaaagctgatt
attcacttgcaaaaggataaaagccttctttttattagccacacacaaaa
ctaaatcaaaatgaatcaaagacctagatgttaaaaatgataacttttaa
aatctcaggagaaaacataggagtaaatcttggaaacttttaattaaaca
atgctttaaattatgatactaaatattcaagtgacaaactaaaaagactt
gaataattttatcaaaatttaaaatgtttgtattttaaaagataccatta
agtgaaataaatgctcatgtattgaaaggagatattttcaactatttgca
cgctgcctacctgataagaaaatcaggtaatgaaataaatcactgaaaag
tcagaccagcttagaagtgggcaaaagttcataaaaatgaaaatactcag
atctctctctctctctctctctcacacacacacacacacacacacacaca
cacacacacactcaacattaccatcattaaagaaacacaaactgcaatga
gatactgcttcacatccattagagtgaataacaccttttaaatatgattc
acaatggcaactggaacagatgaaacttacatttgttgttagtgagacta
taaagttgtttagccattttgaaaactggggggctggtgagatagctcag
cagtaagagcagagactgctcttccgaagatcctgagttcaaatcccagc
accacatggtcgctcacagctccccatagaggtctgatgccctctttctg
gcgagtctgagacagctacagtgtacttatgtaaaataataaataaatct
taaaaaaaaaagaaaactgggctggccatctcaaattgttatattctgat
tcgattggaagacaatgaagcacgtgatatcccccctctcttcatacgtc
agttcttggaaattctagactaaaggtacactttcaaggtctacgtatac
tggatacgtgaacatg
gaattcactctgtagaccaggctacctgctcctacctcctgagaactgtg
catcaccacatgctgccttaaagtttaaaccttcagtgatgcagcgacca
agtgtgctgtgaggctgaaccaggagggttccatgtgaggatagactcca
tctaggctgtaagaactgagaccctatctcaaaaaaaaaaaaaaaaaaaa
aaaattgtggacaaaaggaagagtcttgcttttgtaaaaacaaactccac
ataagcattacaaagagtcaaattgagttaaataatttttgatccagaag
taactactttttgtaatttcacttttattagagatttcaaatgttgcctc
tataattgttcaaagaagctctgagtaggacacacatgatgaagagatta
tggaggatttacaggcagattttaagaaaaatgtcaacaggtatgtctta
tagaaaaatgtcataaaactatgcaaatcagaataaaactgtttactaca
aatctctgatactctaattgttgttaagtataaatactagacttctaaat
gtttaattaccaaagcctcttaaaacttcctttttaaacacatatatgtg
caataaacacaatccccaaagaccatgcctcatgtaagtgcgtgcatgcg
cgcgcgcacacgcacacgcacacggacacggggacacaaacacacatctc
tgcatgtgcactgctgtctcacctgaccaggcttcttgtttgcagcagct
gcagcctgttccatggttttagctttcttcttttcctttttcttttcctt
gtcagcgaaagtaccacgcattttagatattatatcagaatctgtttttg
cgtactgaattctctgtttcagttacagaaaaacaatttagttcactttg
ttgaaaggctgtttaaactagttgttaaccttttaaatcccagtacataa
atactctgcaaaccaaattttaaacatacctctaagaaaattgttgcaat
aaattagtaaaaataatgtggcctacgattcacaataagcaggagtcacc
cacgtctttattaaggaacaatcaggtggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142893776_142894859
seq2: B6Ng01-258A13.g_67_1146 (reverse)

seq1  GCCACCCTTGATTGTCCTTTAATAAAGACGGTTGGGTGGACTCTTGCTTA  50
      ||||||  ||||||| | ||||||||||||  ||||| ||||| ||||||
seq2  GCCACC--TGATTGTTCCTTAATAAAGACG--TGGGT-GACTCCTGCTTA  45

seq1  -TGTGAATCGTAGGCCACAATTTATTTTTACTAATTTATTGCAACAATTT  99
       ||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TTGTGAATCGTAGGCCACA--TTATTTTTACTAATTTATTGCAACAATTT  93

seq1  TCTTAGAGGTATGTTTAAAA-TTGGTTTGCAGAGTATTTATGTACTGGGA  148
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCTTAGAGGTATGTTTAAAATTTGGTTTGCAGAGTATTTATGTACTGGGA  143

seq1  TTTAAAAGGTTAACAACTAGTTTAAACAGCC-TTCAACAAAGTGAACTAA  197
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTTAAAAGGTTAACAACTAGTTTAAACAGCCTTTCAACAAAGTGAACTAA  193

seq1  ATTGTTTTTCTGTAACTGAAACAGAGAATTCAGTACGCAAAAACAGATTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTTCTGTAACTGAAACAGAGAATTCAGTACGCAAAAACAGATTC  243

seq1  TGATATAATATCTAAAATGCGTGGTACTTTCGCTGACAAGGAAAAGAAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATAATATCTAAAATGCGTGGTACTTTCGCTGACAAGGAAAAGAAAA  293

seq1  AGGAAAAGAAGAAAGCTAAAACCATGGAACAGGCTGCAGCTGCTGCAAAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGAAGAAAGCTAAAACCATGGAACAGGCTGCAGCTGCTGCAAAC  343

seq1  AAGAAGCCTGGTCAGGTGAGACAGCAGTGCACATGCAGAGATGTGTGTTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCCTGGTCAGGTGAGACAGCAGTGCACATGCAGAGATGTGTGTTT  393

seq1  GTGTCCCCGTGTCCGTGTGCGTGTGCGTGTGCGCGCGCGCATGCACGCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCCGTGTCCGTGTGCGTGTGCGTGTGCGCGCGCGCATGCACGCAC  443

seq1  TTACATGAGGCATGGTCTTTGGGGATTGTGTTTATTGCACATATATGTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGAGGCATGGTCTTTGGGGATTGTGTTTATTGCACATATATGTGT  493

seq1  TTAAAAAGGAAGTTTTAAGAGGCTTTGGTAATTAAACATTTAGAAGTCTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGGAAGTTTTAAGAGGCTTTGGTAATTAAACATTTAGAAGTCTA  543

seq1  GTATTTATACTTAACAACAATTAGAGTATCAGAGATTTGTAGTAAACAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATACTTAACAACAATTAGAGTATCAGAGATTTGTAGTAAACAGT  593

seq1  TTTATTCTGATTTGCATAGTTTTATGACATTTTTCTATAAGACATACCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTGATTTGCATAGTTTTATGACATTTTTCTATAAGACATACCTG  643

seq1  TTGACATTTTTCTTAAAATCTGCCTGTAAATCCTCCATAATCTCTTCATC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATTTTTCTTAAAATCTGCCTGTAAATCCTCCATAATCTCTTCATC  693

seq1  ATGTGTGTCCTACTCAGAGCTTCTTTGAACAATTATAGAGGCAACATTTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTCCTACTCAGAGCTTCTTTGAACAATTATAGAGGCAACATTTG  743

seq1  AAATCTCTAATAAAAGTGAAATTACAAAAAGTAGTTACTTCTGGATCAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCTAATAAAAGTGAAATTACAAAAAGTAGTTACTTCTGGATCAAA  793

seq1  AATTATTTAACTCAATTTGACTCTTTGTAATGCTTATGTGGAGTTTGTTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTAACTCAATTTGACTCTTTGTAATGCTTATGTGGAGTTTGTTT  843

seq1  TTACAAAAGCAAGACTCTTCCTTTTGTCCACAATTTTTTTTTTTTTTTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAAGCAAGACTCTTCCTTTTGTCCACAATTTTTTTTTTTTTTTTT  893

seq1  TTTTTTTGAGATAGGGTCTCAGTTCTTACAGCCTAGATGGAGTCTATCCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGAGATAGGGTCTCAGTTCTTACAGCCTAGATGGAGTCTATCCT  943

seq1  CACATGGAACCCTCCTGGTTCAGCCTCACAGCACACTTGGTCGCTGCATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGAACCCTCCTGGTTCAGCCTCACAGCACACTTGGTCGCTGCATC  993

seq1  ACTGAAGGTTTAAACTTTAAGGCAGCATGTGGTGATGCACAGTTCTCAGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGGTTTAAACTTTAAGGCAGCATGTGGTGATGCACAGTTCTCAGG  1043

seq1  AGGTAGGAGCAGGTAGCCTGGTCTACAGAGTGAATTC  1084
      |||||||||||||||||||||||||||||||||||||
seq2  AGGTAGGAGCAGGTAGCCTGGTCTACAGAGTGAATTC  1080