BAC Information

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BAC

Clone NameB6Ng01-258E11
Chromosome2 (Build37)
Map Location 134,837,902 - 134,839,056
singlet/doubletsinglet
Overlap genePlcb1
Upstream geneHao1, Txndc13, LOC627897, LOC433478
Downstream geneLOC100043487, LOC100043786, LOC100043788, Plcb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258E11.bB6Ng01-258E11.g
ACCGA063759GA063760
length1,0421,142
definitionB6Ng01-258E11.b B6Ng01-258E11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagaggaattcgacaacaaaaggagatcaagggg
atacatattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaagcc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatacgttggct
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ttgaagaaagaaattaaagaagatctcagaagatagaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaagttttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagcttactacagagcaatttgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatctttgacagtgtag
ctataaccatccagttgaagaaagacagcattttcacatttgtgcagcac
aactggttgttatcgtgagagaatgcgaatcgatcatacttatctcttgt
actaaggtcaatctaatgtgatcaaggaccttcacatagaac
gaattccagcaatgccaacatagaagtgatttagaagatgttaaaatttg
ttttataagataataagtttgcccagtgagctgtgcattggattggctaa
attagaagatggtcatggccgggagtggtggtgcacgcctttaatcctag
cgctctcgggaggtagagacaggcagatttctgaatttgaggccagcctg
gtctacaaagtgagttccaggacagccagggctatacagagaaaccctgt
ctcgaaaaaccaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
agaagatggtcatggcatcaccatgtggcatttcaatgtagtgattgttg
tccagaaaccaacctgtatatgaacataagtgatgtctggtgagacacac
aggtgatcgagaatcaaagagaagattaattttattcaacacctagaatg
gctttgcctgtcaacatccagtaccctcggatgttaacccagccaggaag
ggggtttagtggaatctattcatgtcttatgtaaaatttgaatgcccggc
ctactagacaccaagaccgttcttgctttttcattgagaaggatgactta
tgcataatttcctttgtgccataaacattgcctatgttagttaaagtagc
ttttcaaaagtctttttagggctcatgtgtagctgtttacatatctaaaa
tatttttcttatttaccagtaaaatatgtgacagagattttgttttcttt
ctttgtaggcaggttatattatcaagaatattgacagctaactcgcactg
aaagcaatgggtggtattgtgaatttttggaatgaatccctgtggtgtga
gtttttttattttagagtttggaccacatattttgcatatctatatcaaa
agtcagagatgctcagttttcttattatgtgcaatccactatacatccaa
ttctgaacattttccccaatgtttcccttccaatatctagttgctgacat
gaaatatggagattaaagcagtaggtaagggctgagaatagtttcaggta
ttttactttctctcattacctgaaacccaacaacatgctcctcgagtagc
tatacaggtgggggatagcagtttctagtgcagctagaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134837902_134839056
seq2: B6Ng01-258E11.g_67_1208

seq1  GAATTCCAGCAATG-AAACATAGAAGTGATTTAGAAGATGTTAAAATTTG  49
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCAATGCCAACATAGAAGTGATTTAGAAGATGTTAAAATTTG  50

seq1  TTTTATAAGATAATAAGTTTGCCCAGTGAGCTGTGCATTGGATTGGCTAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAGATAATAAGTTTGCCCAGTGAGCTGTGCATTGGATTGGCTAA  100

seq1  ATTAGAAGATGGTCATGGCCGGGAGTGGTGGTGCACGCCTTTAATCCTAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAGATGGTCATGGCCGGGAGTGGTGGTGCACGCCTTTAATCCTAG  150

seq1  CGCTCTCGGGAGGTAGAGACAGGCAGATTTCTGAATTTGAGGCCAGCCTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCTCGGGAGGTAGAGACAGGCAGATTTCTGAATTTGAGGCCAGCCTG  200

seq1  GTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGT  250

seq1  CTCGAAAAACCAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAAAACCAAAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  300

seq1  AGAAGATGGTCATGGCATCACCATGTGGCATTTCAATGTAGTGATTGTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATGGTCATGGCATCACCATGTGGCATTTCAATGTAGTGATTGTTG  350

seq1  TCCAGAAACCAACCTGTATATGAACATAAGTGATGTCTGGTGAGACACAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAACCAACCTGTATATGAACATAAGTGATGTCTGGTGAGACACAC  400

seq1  AGGTGATCGAGAATCAAAGAGAAGATTAATTTTATTCAACACCTAGAATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATCGAGAATCAAAGAGAAGATTAATTTTATTCAACACCTAGAATG  450

seq1  GCTTTGCCTGTCAACATCCAGTACCCTCGGATGTTAACCCAGCCAGGAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCCTGTCAACATCCAGTACCCTCGGATGTTAACCCAGCCAGGAAG  500

seq1  GGGGTTTAGTGGAATCTATTCATGTCTTATGTAAAATTTGAATGCCCGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTTAGTGGAATCTATTCATGTCTTATGTAAAATTTGAATGCCCGGC  550

seq1  CTACTAGACACCAAGACCGTTCTTGCTTTTTCATTGAGAAGGATGACTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGACACCAAGACCGTTCTTGCTTTTTCATTGAGAAGGATGACTTA  600

seq1  TGCATAATTTCCTTTGTGCCATAAACATTGCCTATGTTAGTTAAAGTAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATTTCCTTTGTGCCATAAACATTGCCTATGTTAGTTAAAGTAGC  650

seq1  TTTTCAAAAGTCTTTTTAGGGCTCATGTGTAGCTGTTTACATATCTAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAAGTCTTTTTAGGGCTCATGTGTAGCTGTTTACATATCTAAAA  700

seq1  TATTTTTCTTATTTACCAGTAAAATATGTGACAGAGATTTTGTTTTCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTCTTATTTACCAGTAAAATATGTGACAGAGATTTTGTTTTCTTT  750

seq1  CTTTGTAGGCAGGTTATATTATCAAGAATATTGACAGCTAACTCGCACTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGGCAGGTTATATTATCAAGAATATTGACAGCTAACTCGCACTG  800

seq1  AAAGCAATGGGTGGTATTGTGAATTTTTGGAATGAATCCCTGTGGTGTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATGGGTGGTATTGTGAATTTTTGGAATGAATCCCTGTGGTGTGA  850

seq1  GTTTTTTTATTTTAGAGTTTGGACCACATA-TTTGCATATCTATATCAAA  898
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTTTTTTTATTTTAGAGTTTGGACCACATATTTTGCATATCTATATCAAA  900

seq1  AGTCAGAGATGCTCAGTTTTC-TATTATGTGCAAT-CACTAATACATCC-  945
      ||||||||||||||||||||| ||||||||||||| |||| |||||||| 
seq2  AGTCAGAGATGCTCAGTTTTCTTATTATGTGCAATCCACT-ATACATCCA  949

seq1  ATTCTG-ACATTTTCCCCAATGTTT-CCTTCC-ATATCTAGTTGCTGACA  992
      |||||| |||||||||||||||||| |||||| |||||||||||||||||
seq2  ATTCTGAACATTTTCCCCAATGTTTCCCTTCCAATATCTAGTTGCTGACA  999

seq1  TGAAAATAT-GAGATTAAAAAGCAGTAAGGTAAAGGCTGAAAGAAATAGT  1041
      || |||||| ||||||  |||||||| |||||| ||||||    ||||||
seq2  TG-AAATATGGAGATT--AAAGCAGT-AGGTAAGGGCTGA---GAATAGT  1042

seq1  TTCCAAGGTTATTTTACTTTTCTCTCATTTACCTTGAAAAACACAAACAA  1091
      |||  ||| |||||||| ||||||||| ||||||    |||| |||   |
seq2  TTC--AGG-TATTTTAC-TTTCTCTCA-TTACCT---GAAACCCAA--CA  1082

seq1  ACATGCTCCTCGAGTAGCTAATACAGTGGGGGAGATAGCAGTTTTCTAGT  1141
      ||||||||||||||||||| |||||| | ||| |||||||| ||||||||
seq2  ACATGCTCCTCGAGTAGCT-ATACAG-GTGGGGGATAGCAG-TTTCTAGT  1129

seq1  GCAGCATAGAATTA  1155
      ||||| ||||||||
seq2  GCAGC-TAGAATTA  1142