BAC Information

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BAC

Clone NameB6Ng01-258I18
Chromosome2 (Build37)
Map Location 91,857,435 - 91,858,571
singlet/doubletsinglet
Overlap geneCreb3l1
Upstream geneLOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd, Nr1h3, Acp2, Ddb2, Pacsin3, Zfp289, 1110051M20Rik, Lrp4, LOC619941, Ckap5, F2, Zfp408, Arhgap1, D2Ertd391e, LOC100043179, D230010M03Rik, D030051N19Rik, Chrm4, Mdk, Dgkz
Downstream genePhf21a, Gyltl1b, Pex16, 1700029I15Rik, Mapk8ip1, Cry2, Slc35c1, LOC100042775, LOC100043205, Chst1, Syt13, LOC100042784
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258I18.bB6Ng01-258I18.g
ACCGA063958GA063959
length9861,144
definitionB6Ng01-258I18.b B6Ng01-258I18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatttgttgggactccatagagaggaacacactgaaagagttct
ggtggtgtgccgcagtttcttgctgtagtggacacacccttcctcaccct
tccaagtggaagttcttgctctccaggttccagaagagttggctgctaac
cactcagctcagctcctctccaggcactgcccttagccagaagccaggaa
aaggagttttacccaaatgcatgcctgtccctggaagaagaacatctgca
tccaagacttgttaatgaagaggtaaaatagctcagccccctgacaaatt
aggaccagtctaaagagccatcctgaaaacagctgctgagcctgtgttgt
aatctgttgacagttcaacatttctgttcaacctgtgtccctcacctttc
acagttggtttttttttcctgtttaaaaaccatttttattagcatatatt
gacagcatccccacttcctgcatgtaaatctctgccttggtatgtgcttc
ttgcagaacctaacacttcagcgtaaagctggtataacagttcaatgaag
gggctggagagacggctcagagatttaaaaccacttgtcattctttcaga
gaaccccagttcagttcccggtatccacatgatggctcgcaaccattcac
aacttcagttccagggcatctgaacccctcttctgacctcctccatgggt
actaggcatgtacgtacataaaagcatataagcaaatcatgtacacatgt
tatatatatatatatatatatatatatatatatatatatatatatatata
tacatacatatatgagagagaaaggctgggttgaagactcagttgttgct
aaagtgtctgctgtacaaacatgaagacctgaggtcagactccagaaccc
atgtaaaaatccaggtgtggcagatacacatgtcattagtcccagcttct
ggtttggagtgggaggtgagaaaattggagttgttc
gaattctctgtccctggagagctgggggaggagcagactgagcctggcca
ctcaactcagtcaagtcaaactcattgatgatatggtatgtccagttctc
agggatcaaggacttgaactttgcagggaaaccaatatccatgacacact
ccctttgagggtcaaggttctgggtcatattctattcctcccagcttctg
agccagactttccaacctccacatttttcctgctcctggcttagggtcct
gtcactgactgtgacttccctgggtctgctcaaggggggttacacagact
tccagccaaagcaatgctcacagtcttcactcaactccacccaaatcttc
ctcctccatcctgcccccctggagtggtgagacttccagaagaacagcct
gttctccaacatctggaactggtttctccagagaggttcaagggcaaacc
aggtccctgatagatgctctgaaggtcccgagtatagagattgcaggagg
tggagaggacccagttgggaggaattccttgtggtcctatagagaacaga
acccagcatggacataaatagggggcaagaggcctgtccagggactccag
ctgtgtacctaaaactccaggtatccatgatgccctaaggacggcaacct
ggagaatgcaggcagagcccttcggatgcaaaccaaaacaagaaagcatg
caaaggagttagtctctagctatttctctctgttctcagattccctggag
cattctcaatttggagagaattgtgtaccctctctgagtctccttttctc
atctgcacaaggaatgggatgctggttggatgctcaggcaggagaagacg
gatggtgctacccgctctgtattgatggtgctacccgctctgtattgctt
ctcaatggagccttcaccatcaggttgttggaagaacactgggggagggc
atgcaaggttcacctttggagaaacccttgccaagacctctaacttgtct
tcaaggccctaacaagtgtctgctctgtcatggtgtcaacgagtgttccc
atatagaagcagaagaagtcctgggtgatgttgtatgtatcatggatatg
gcaatgacaagaactcgatgccttaagcatcatgggagtgacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_91857435_91858571
seq2: B6Ng01-258I18.g_67_1210

seq1  GAATTCTCTGTCCCTGGAGAGCTGGGGGAGGAGCAGACTGAGCCTGGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTCCCTGGAGAGCTGGGGGAGGAGCAGACTGAGCCTGGCCA  50

seq1  CTCAACTCAGTCAAGTCAAACTCATTGATGATATGGTATGTCCAGTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTCAGTCAAGTCAAACTCATTGATGATATGGTATGTCCAGTTCTC  100

seq1  AGGGATCAAGGACTTGAACTTTGCAGGGAAACCAATATCCATGACACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCAAGGACTTGAACTTTGCAGGGAAACCAATATCCATGACACACT  150

seq1  CCCTTTGAGGGTCAAGGTTCTGGGTCATATTCTATTCCTCCCAGCTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGAGGGTCAAGGTTCTGGGTCATATTCTATTCCTCCCAGCTTCTG  200

seq1  AGCCAGACTTTCCAACCTCCACATTTTTCCTGCTCCTGGCTTAGGGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGACTTTCCAACCTCCACATTTTTCCTGCTCCTGGCTTAGGGTCCT  250

seq1  GTCACTGACTGTGACTTCCCTGGGTCTGCTCAAGGGGGGTTACACAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGACTGTGACTTCCCTGGGTCTGCTCAAGGGGGGTTACACAGACT  300

seq1  TCCAGCCAAAGCAATGCTCACAGTCTTCACTCAACTCCACCCAAATCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCAAAGCAATGCTCACAGTCTTCACTCAACTCCACCCAAATCTTC  350

seq1  CTCCTCCATCCTGCCCCCCTGGAGTGGTGAGACTTCCAGAAGAACAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCATCCTGCCCCCCTGGAGTGGTGAGACTTCCAGAAGAACAGCCT  400

seq1  GTTCTCCAACATCTGGAACTGGTTTCTCCAGAGAGGTTCAAGGGCAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCCAACATCTGGAACTGGTTTCTCCAGAGAGGTTCAAGGGCAAACC  450

seq1  AGGTCCCTGATAGATGCTCTGAAGGTCCCGAGTATAGAGATTGCAGGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCTGATAGATGCTCTGAAGGTCCCGAGTATAGAGATTGCAGGAGG  500

seq1  TGGAGAGGACCCAGTTGGGAGGAATTCCTTGTGGTCCTATAGAGAACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGGACCCAGTTGGGAGGAATTCCTTGTGGTCCTATAGAGAACAGA  550

seq1  ACCCAGCATGGACATAAATAGGGGGCAAGAGGCCTGTCCAGGGACTCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCATGGACATAAATAGGGGGCAAGAGGCCTGTCCAGGGACTCCAG  600

seq1  CTGTGTACCTAAAACTCCAGGTATCCATGATGCCCTAAGGACGGCAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACCTAAAACTCCAGGTATCCATGATGCCCTAAGGACGGCAACCT  650

seq1  GGAGAATGCAGGCAGAGCCCTTCGGATGC-AACCAAAACAAGAAAGCATG  699
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGAGAATGCAGGCAGAGCCCTTCGGATGCAAACCAAAACAAGAAAGCATG  700

seq1  CAAAGGAGTTAGTCTCTAGCTATTTCTCTCTGTTCTCAGATTCCCTGGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGTTAGTCTCTAGCTATTTCTCTCTGTTCTCAGATTCCCTGGAG  750

seq1  CATTCTCAATTTGGAGAGAATTGTGTACCCTCTCTGAGTCTCCTTTTCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCAATTTGGAGAGAATTGTGTACCCTCTCTGAGTCTCCTTTTCTC  800

seq1  ATCTGCACAAGGAATGGGATGCTGGTTGGATGCTCAGGCAGGAGAAGACG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCACAAGGAATGGGATGCTGGTTGGATGCTCAGGCAGGAGAAGACG  850

seq1  GATGGTGCTACCCGCTCTGTATTGATGGTGCTACCCGCTCTGTATTGCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGCTACCCGCTCTGTATTGATGGTGCTACCCGCTCTGTATTGCTT  900

seq1  CTCAATGGAGCCTTCACCATCAGGT--GTGGAAG-ACACT-GGGGAGGGC  945
      |||||||||||||||||||||||||   |||||| ||||| |||||||||
seq2  CTCAATGGAGCCTTCACCATCAGGTTGTTGGAAGAACACTGGGGGAGGGC  950

seq1  ATGCAAGG-TCACC-TTGGAGAAA-CCTTG-CAAGACCTCTAACTTGTCT  991
      |||||||| ||||| ||||||||| ||||| |||||||||||||||||||
seq2  ATGCAAGGTTCACCTTTGGAGAAACCCTTGCCAAGACCTCTAACTTGTCT  1000

seq1  TC-AGGCCCTACAAGGTGTCTGCTCTGTCATGGTGTCAACGAGTGTCCCC  1040
      || ||||||||  | ||||||||||||||||||||||||||||||| |||
seq2  TCAAGGCCCTAACAAGTGTCTGCTCTGTCATGGTGTCAACGAGTGTTCCC  1050

seq1  ATATAGGAAGCAAGAGAAGTCCTGGGTGAGTGTGTATTGTTATCATGGGT  1090
      ||||| ||||||  |||||||||||||||   |||||   |||||||| |
seq2  ATATA-GAAGCAGAAGAAGTCCTGGGTGATGTTGTAT--GTATCATGGAT  1097

seq1  ATGGCCATGACAAGGACTCGAATGCCTT-AGCATCATGGGAGTGACAA  1137
      ||||| |||||||| ||||| ||||||| |||||||||||||||||||
seq2  ATGGCAATGACAAGAACTCG-ATGCCTTAAGCATCATGGGAGTGACAA  1144