BAC Information

Click to search

BAC

Clone NameB6Ng01-262C04
Chromosome2 (Build37)
Map Location 118,348,464 - 118,427,653
singlet/doubletdoublet
Overlap geneBmf, LOC640461, Bub1b
Upstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik, Eif2ak4, Srp14, LOC668859
Downstream genePak6, Gm1337, Plcb2, LOC100043272, A430105I19Rik, Disp2, D2Ertd750e, Ivd, Bahd1, Chst14, LOC677379, Ccdc32, Rpusd2, Casc5, Rad51, 1200015F23Rik, Gchfr, Dnajc17, OTTMUSG00000015762, LOC545640, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609, Dll4, Chac1, Inoc1, LOC100043612, Exdl1, 1500003O03Rik, LOC100043307
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262C04.bB6Ng01-262C04.g
ACCGA066632GA066633
length965330
definitionB6Ng01-262C04.b B6Ng01-262C04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,426,941 - 118,427,653)(118,348,464 - 118,348,789)
sequence
gaattctatctagtcagcaggcacttcacgaagaggggagacggactgag
gagaatgagggaacttcctaaagtaagatcttatggtgcgatgcactcac
tgtcttacagcacactcaaagatctgagcaatcacggtacccaaattata
ctcaaaagaaattcccagcactatgcggacagctcagtggtaggccctgg
ggccccgtccctgaagagctggagagatggctcaagggttacaagcccac
tgttcttgcagaggacaccacgctgggcagctcacatcagcccttaactc
tagctctgggggatcaaagccccttttgaccccctcgggaacttgtagtc
acacatactcacacacatacatacatataatggaaaataagtaatttttt
aaaagtggggatgggggtgagagagcaatgaataagaatcatgcagatga
ggttttgtaacattaaccaaaatagggaaatagaaaaaggaaggccattt
aggaatgaagagcgttgttttctgacagcagaattacatccagatgaacc
cagcatcactgaaatcagcctaggtgaaaaagcattagctacatctatcc
tgccaggtgccacaacttagcaacacaacacactgcacatggctcagccc
cagagactcagggtcactgggtactacagctctctgcagctgcccagcat
ctcaaggcagctctcctgcacatccattatccttgaaaagatcacatttc
agagtatgatttcaatcaaatgagtataatttccacacacccagagccct
acaatcataagctgaatgttctcaagctccgggctgtctacaacatcaca
gtaggagacactgagaaggcaagagacgtcaacggtcgttgtaaaagcaa
aagtgaggccagagactgggatgagacatgacaggagcagacagcatgag
agtcagacaagtaga
caggccagtcagggccatggcaagacctgtttcaaaacaacaacagaacc
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagaga
gacagacaaacacacagacagactgacagacagacagacagacagtcaga
gacagagagaatctcactaagtgttgtctcaatccatttacctcaccctt
cccagtgctggaattacaggttcacacaagccatgcccccatctcgttgc
ctgaaattttatatataattccttgagtttagacacactctgtgtgtttt
tcctggggagatgatcaatattttgtttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_118426941_118427653
seq2: B6Ng01-262C04.b_45_757 (reverse)

seq1  GAGCTGCCTTGAGATGCTGGGCAGCTGCAGAGAGCCGTAGTACCCAGTGA  50
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAGCTGCCTTGAGATGCTGGGCAGCTGCAGAGAGCTGTAGTACCCAGTGA  50

seq1  CCCTGAGTCTCTGGGGCTGAGCCATGTGCAGTGTGTTGTGTTGCTAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGTCTCTGGGGCTGAGCCATGTGCAGTGTGTTGTGTTGCTAAGTT  100

seq1  GTGGCACCTGGCAGGATAGATGTAGCTAATGCTTTTTCACCTAGGCTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACCTGGCAGGATAGATGTAGCTAATGCTTTTTCACCTAGGCTGAT  150

seq1  TTCAGTGATGCTGGGTTCATCTGGATGTAATTCTGCTGTCAGAAAACAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGATGCTGGGTTCATCTGGATGTAATTCTGCTGTCAGAAAACAAC  200

seq1  GCTCTTCATTCCTAAATGGCCTTCCTTTTTCTATTTCCCTATTTTGGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCATTCCTAAATGGCCTTCCTTTTTCTATTTCCCTATTTTGGTTA  250

seq1  ATGTTACAAAACCTCATCTGCATGATTCTTATTCATTGCTCTCTCACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACAAAACCTCATCTGCATGATTCTTATTCATTGCTCTCTCACCCC  300

seq1  CATCCCCACTTTTAAAAAATTACTTATTTTCCATTATATGTATGTATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCACTTTTAAAAAATTACTTATTTTCCATTATATGTATGTATGTG  350

seq1  TGTGAGTATGTGTGACTACAAGTTCCCGAGGGGGTCAAAAGGGGCTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTATGTGTGACTACAAGTTCCCGAGGGGGTCAAAAGGGGCTTTGA  400

seq1  TCCCCCAGAGCTAGAGTTAAGGGCTGATGTGAGCTGCCCAGCGTGGTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCAGAGCTAGAGTTAAGGGCTGATGTGAGCTGCCCAGCGTGGTGTC  450

seq1  CTCTGCAAGAACAGTGGGCTTGTAACCCTTGAGCCATCTCTCCAGCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAAGAACAGTGGGCTTGTAACCCTTGAGCCATCTCTCCAGCTCTT  500

seq1  CAGGGACGGGGCCCCAGGGCCTACCACTGAGCTGTCCGCATAGTGCTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACGGGGCCCCAGGGCCTACCACTGAGCTGTCCGCATAGTGCTGGG  550

seq1  AATTTCTTTTGAGTATAATTTGGGTACCGTGATTGCTCAGATCTTTGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTTTGAGTATAATTTGGGTACCGTGATTGCTCAGATCTTTGAGT  600

seq1  GTGCTGTAAGACAGTGAGTGCATCGCACCATAAGATCTTACTTTAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTAAGACAGTGAGTGCATCGCACCATAAGATCTTACTTTAGGAAG  650

seq1  TTCCCTCATTCTCCTCAGTCCGTCTCCCCTCTTCGTGAAGTGCCTGCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCATTCTCCTCAGTCCGTCTCCCCTCTTCGTGAAGTGCCTGCTGA  700

seq1  CTAGATAGAATTC  713
      |||||||||||||
seq2  CTAGATAGAATTC  713

seq1: chr2_118348464_118348789
seq2: B6Ng01-262C04.g_70_399

seq1  CAGGCCAGTCAGGGCCATGGCAAGACCTGTTTCAAAACAACAACAGAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAGTCAGGGCCATGGCAAGACCTGTTTCAAAACAACAACAGAACC  50

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGA  100

seq1  GACAG----ACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGA  146
      |||||    ||| |||||||||| ||||||||||||||||||||| ||||
seq2  GACAGACAAACACACAGACAGACTGACAGACAGACAGACAGACAGTCAGA  150

seq1  GACAGAGAGAATCTCACTAAGTGTTGTCTCAATCCATTTACCTCAGCCTT  196
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GACAGAGAGAATCTCACTAAGTGTTGTCTCAATCCATTTACCTCACCCTT  200

seq1  CCCAGTGCTGGAATTACAGGTTCACACCAGCCATGCCCCCAGCTAATTGC  246
      ||||||||||||||||||||||||||| ||||||||||||| ||  ||||
seq2  CCCAGTGCTGGAATTACAGGTTCACACAAGCCATGCCCCCATCTCGTTGC  250

seq1  CTGAAATTTTATATATAAATCCTTGAGTTTAGACACACTCTGTGTCTTTT  296
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  CTGAAATTTTATATATAATTCCTTGAGTTTAGACACACTCTGTGTGTTTT  300

seq1  TCCTGGGGAGATGATCAATATTTTGTTTTA  326
      |||||||||||||||||||||||||||| |
seq2  TCCTGGGGAGATGATCAATATTTTGTTTCA  330