BAC Information

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BAC

Clone NameB6Ng01-263D11
Chromosome2 (Build37)
Map Location 30,358,293 - 30,421,678
singlet/doubletdoublet
Overlap genenone
Upstream geneCrsp8, Rapgef1, LOC433415, OTTMUSG00000012686, Trub2, Coq4, Slc27a4, Urm1, LOC100041002, Ceecam1, Odf2, Gle1l, Spna2, LOC665532, Wdr34, Set, Pkn3, Zdhhc12, Zer1, LOC100041114, Tbc1d13, Slc39a1-ps, Endog, D2Wsu81e, Ccbl1, 1700084E18Rik, Lrrc8a, Phyhd1, Dolk, Nup188, Sh3glb2, 5730472N09Rik, Dolpp1, Crat, Ppp2r4, Ier5l
Downstream geneCstad, EG665645, 1700001O22Rik, 2610205E22Rik, Asb6, Prrx2, Ptges, Ppia-ps2_387.1, Tor1b, Tor1a, BC005624, Usp20, Fnbp1, Gpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076, Ass1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263D11.bB6Ng01-263D11.g
ACCGA067440GA067441
length316108
definitionB6Ng01-263D11.b B6Ng01-263D11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,358,293 - 30,358,608)(30,421,571 - 30,421,678)
sequence
cagaccctacactcactgctgtgtggccttgagcaagtgtactcacctct
ctgagcttcagtatcacaaaaaagtctgctcagaggatgttccaaaagtc
aatctagatatacagggggtcccgtgggggagacatacagaggtgcatgt
tggcacctgcaccggggtaacccaggatggggacagtcgtgctgtgttca
ctcttcctgttaggtgtcctactgcttttctctgacacagggtggtattc
tgctgagggagggctccctggtctacacccctgatgcaccacttggggga
gagggatactggggtg
aagagggctggagagagaaactggccgccatccccaacagagtcaagaaa
gtgaaagacacttggtccaagtcacaaacgtgagaaatggtgggggtgtg
ggtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_30358293_30358608
seq2: B6Ng01-263D11.b_51_366

seq1  CAGACCCTACACTCACTGCTGTGTGGCCTTGAGCAAGTGTACTCACCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCTACACTCACTGCTGTGTGGCCTTGAGCAAGTGTACTCACCTCT  50

seq1  CTGAGCTTCAGTATCACAAAAAAGTCTGCTCAGAGGATGTTCCAAAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTTCAGTATCACAAAAAAGTCTGCTCAGAGGATGTTCCAAAAGTC  100

seq1  AATCTAGATATACAGGGGGTCCCGTGGGGGAGACATACAGAGGTGCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGATATACAGGGGGTCCCGTGGGGGAGACATACAGAGGTGCATGT  150

seq1  TGGCACCTGCACCGGGGTAACCCAGGATGGGGACAGTCGTGCTGTGTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCACCTGCACCGGGGTAACCCAGGATGGGGACAGTCGTGCTGTGTTCA  200

seq1  CTCTTCCTGTTAGGTGTCCTACTGCTTTTCTCTGACACAGGGTGGTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTGTTAGGTGTCCTACTGCTTTTCTCTGACACAGGGTGGTATTC  250

seq1  TGCTGAGGGAGGGCTCCCTGGTCTACACCCCTGATGCACCACTTGGGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGGAGGGCTCCCTGGTCTACACCCCTGATGCACCACTTGGGGGA  300

seq1  GAGGGATACTGGGGTG  316
      ||||||||||||||||
seq2  GAGGGATACTGGGGTG  316

seq1: chr2_30421571_30421678
seq2: B6Ng01-263D11.g_71_178 (reverse)

seq1  CACCCACCCACACCCCCACCATTTCTCACGTTTGTGACTTGGACCAAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACCCACACCCCCACCATTTCTCACGTTTGTGACTTGGACCAAGTG  50

seq1  TCTTTCACTTTCTTGACTCTGTTGGGGATGGCGGCCAGTTTCTCTCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCACTTTCTTGACTCTGTTGGGGATGGCGGCCAGTTTCTCTCTCCA  100

seq1  GCCCTCTT  108
      ||||||||
seq2  GCCCTCTT  108