BAC Information

Click to search

BAC

Clone NameB6Ng01-263M10
Chromosome2 (Build37)
Map Location 41,103,443 - 41,104,614
singlet/doubletsinglet
Overlap geneLrp1b
Upstream geneLOC666531, LOC100042629
Downstream geneLOC625094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263M10.bB6Ng01-263M10.g
ACCGA067856GA067857
length1,2091,156
definitionB6Ng01-263M10.b B6Ng01-263M10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtctctctaaaatcaataccaaatgtattattttcgtgttaaa
gcttaactgccagtttttgtatatgaatgtacaatggtgcagcttttaat
acctcattaaagaaacattgtttgaaatcctatcttttataagtctggtt
tctaggacaggaactacataaaatattatcccaattcagaggtatctcta
gagacttatttccctgggttggctcatgccacgggttgttgcccagaata
actccaacctgagttaccagttttaagccaactttatgttactaatgtta
cacattttttaaccataacaaaaaacttgtaagacaataatctataatga
agatgtggaaaacatatttcaatccttaagaccagtcagaaattaacatg
aagtgactatacatatttacttatttagactagagacacaattttttttt
ttactatttctagctgtaacttaagggaagaacaccttgtcacctgctga
acccaataattagtcacagagatttttgttggaaaaacagccatcagttt
cccgtccagagaagctgaaaagctgctggctcctttaagagtggcttgta
cagacaatcagcccctggcaggactttccaacagcgctagaatccaagat
atatgtgcagggctccaatggcagtttatcagcttttcctgtgtcaattg
agactgagtaaagggtgaatggacagcagataaagttttaaccatttttt
ttcttttgaacataaaagagcatcaatcaagcaacaaagcaaaaactaca
gacataaactgtcagacatggacagaaaggtacaccaaggacattcatga
agcagagagggaagagaaccagatgtcccacaaaaatgacccagatattc
tatctaagagacacagaaaccagaaattatgcattcccctagtgggaacg
acagaggaagcaggatgtctcctaacctgcttcttgaacctaggagagat
ctggaacagcttcttttcattttcttctatttcactaagcttcctgggat
agtgggaggactgcttctttggaatccatctccctctcatgtctagtgtt
taactatctttattaaccgctaaaagctaaaggcatctatggaaatatct
tgctcgtgaattagcatattctctaagccatattatcacaggagaggcat
ttcttagct

gaattctagtgtatattattcaatctctgctcctggacagtacatgaaca
cagaaaagggactctgtcactatcagctgatattacggtatgcagaaaag
atcatctgttaacagaaaatcacatttaagtaaatatattttataaactg
taatgtgcctaaaaggttttttccctgacattgaggcatactcacacatg
aataattcattattaattacacatgtgtttatttaatttgtactagctca
gactgaattataaatgtatacctgttgagcaagtggtctaccctaaggta
ctctctcagcactacaaactgactgactaattttgttttgaaaaggtctt
gttatgcatcccagaaaaactgcaaacttgaaaccatttgcccaggtctt
ttaaatagtgagattaaaagtggaggccagggagatggggtaagaaagat
aactcagtaactaaagttggtgtcatccaagtttgagaacttaagtcctg
cttagccatgtgtaaggggcagcatgacatgcttcctgtcctgtaaagga
gccagcatgtcatggttgcgtgggcataggcttgtttttataataatgta
catatttttgtgttcctccttcgaggaatatcctttctgccaaggttaat
gacttcatgataatcagaaacagatgagtatggcaagcaagggcatgtct
atttctcagcaaaatggtagaaagctgtgaccttcaggatatcatatatg
tatatatatatagtttctcaactatgcaaaatataaggatacaatatcct
ataaggatcttcacagatctaaaggaacagatgcagctgcactgtgactc
agcttgtcataaagatactaggtaaaggagataaagagacttacggagtg
atggaggcaagacaagatcccacccagctaactttcttggttgtgagcct
agccttaaatgaccgagacatctctcagccctgagcctggtccaggcaga
gggacctcaatgtaataaccagaacagagtaagagacagggtagtatatt
actataatccagttacatggaagcaggatggatggaattatgcagtctat
actatatgtcagctatagacagtgaagatctgtaacaataaacatgagtc
tatacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_41103443_41104614
seq2: B6Ng01-263M10.g_69_1224

seq1  GAATTCTAGTGTATATTATTCAATCTCTGCTCCTGGACAGTACATGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTGTATATTATTCAATCTCTGCTCCTGGACAGTACATGAACA  50

seq1  CAGAAAAGGGACTCTGTCACTATCAGCTGATATTACGGTATGCAGAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGGGACTCTGTCACTATCAGCTGATATTACGGTATGCAGAAAAG  100

seq1  ATCATCTGTTAACAGAAAATCACATTTAAGTAAATATATTTTATAAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTGTTAACAGAAAATCACATTTAAGTAAATATATTTTATAAACTG  150

seq1  TAATGTGCCTAAAAGGTTTTTTCCCTGACATTGAGGCATACTCACACATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGCCTAAAAGGTTTTTTCCCTGACATTGAGGCATACTCACACATG  200

seq1  AATAATTCATTATTAATTACACATGTGTTTATTTAATTTGTACTAGCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTCATTATTAATTACACATGTGTTTATTTAATTTGTACTAGCTCA  250

seq1  GACTGAATTATAAATGTATACCTGTTGAGCAAGTGGTCTACCCTAAGGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAATTATAAATGTATACCTGTTGAGCAAGTGGTCTACCCTAAGGTA  300

seq1  CTCTCTCAGCACTACAAACTGACTGACTAATTTTGTTTTGAAAAGGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCAGCACTACAAACTGACTGACTAATTTTGTTTTGAAAAGGTCTT  350

seq1  GTTATGCATCCCAGAAAAACTGCAAACTTGAAACCATTTGCCCAGGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCATCCCAGAAAAACTGCAAACTTGAAACCATTTGCCCAGGTCTT  400

seq1  TTAAATAGTGAGATTAAAAGTGGAGGCCAGGGAGATGGGGTAAGAAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAGTGAGATTAAAAGTGGAGGCCAGGGAGATGGGGTAAGAAAGAT  450

seq1  AACTCAGTAACTAAAGTTGGTGTCATCCAAGTTTGAGAACTTAAGTCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGTAACTAAAGTTGGTGTCATCCAAGTTTGAGAACTTAAGTCCTG  500

seq1  CTTAGCCATGTGTAAGGGGCAGCATGACATGCTTCCTGTCCTGTAAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCATGTGTAAGGGGCAGCATGACATGCTTCCTGTCCTGTAAAGGA  550

seq1  GCCAGCATGTCATGGTTGCGTGGGCATAGGCTTGTTTTTATAATAATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCATGTCATGGTTGCGTGGGCATAGGCTTGTTTTTATAATAATGTA  600

seq1  CATATTTTTGTGTTCCTCCTTCGAGGAATATCCTTTCTGCCAAGGTTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTGTGTTCCTCCTTCGAGGAATATCCTTTCTGCCAAGGTTAAT  650

seq1  GACTTCATGATAATCAGAAACAGATGAGTATGGCAAGCAAGGGCATGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCATGATAATCAGAAACAGATGAGTATGGCAAGCAAGGGCATGTCT  700

seq1  ATTTCTCAGCAAAATGGTAGAAAGCTGTGACCTTCAGGATATCATATATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAGCAAAATGGTAGAAAGCTGTGACCTTCAGGATATCATATATG  750

seq1  TATATATATATAGTTTCTCAACTATGCAAAATATAAGGATACAATATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATAGTTTCTCAACTATGCAAAATATAAGGATACAATATCCT  800

seq1  ATAAGGATCTTCACAGATCTAAAGGAACAGATGCAGCTGCACTGTGACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGATCTTCACAGATCTAAAGGAACAGATGCAGCTGCACTGTGACTC  850

seq1  AGCTTGTCATAAAGATACTAGGT-AAGGAGATAAAGAGACTTAGGGGAGT  899
      ||||||||||||||||||||||| |||||||||||||||||||  |||||
seq2  AGCTTGTCATAAAGATACTAGGTAAAGGAGATAAAGAGACTTA-CGGAGT  899

seq1  GATGGAGGCAAGACAAGATCCCACCCAGCTAACTTTCTTGGTTGTGAGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAGGCAAGACAAGATCCCACCCAGCTAACTTTCTTGGTTGTGAGCC  949

seq1  TAGCCTTTAATGACCGAGACATCTCTCCAGCCCTGAGGCTGGTCCAGGCA  999
      ||||||| |||||||||||||||||| |||||||||| ||||||||||||
seq2  TAGCCTTAAATGACCGAGACATCTCT-CAGCCCTGAGCCTGGTCCAGGCA  998

seq1  GAGGGACCTCAATGTAATAACCAGAACAGAGGTAAAGAGACCAGGGTAGT  1049
      |||||||||||||||||||||||||||||||   |||||| |||||||||
seq2  GAGGGACCTCAATGTAATAACCAGAACAGAG--TAAGAGA-CAGGGTAGT  1045

seq1  AATATTTACTTATAATCCCAGTAACATGAAAGCAAGGAATGGTTGATATA  1099
       ||| |||| |||||| ||||| ||||| |||| ||||  | | ||  ||
seq2  -ATA-TTAC-TATAAT-CCAGTTACATGGAAGC-AGGATGGATGGAATTA  1090

seq1  TGGCCAGTCTATACTATATGGTCAGCTATAGACAAGTGAGAGATCTTGGG  1149
      ||  ||||||||||||||| ||||||||||||| ||||| ||||| ||  
seq2  TG--CAGTCTATACTATAT-GTCAGCTATAGAC-AGTGA-AGATC-TGTA  1134

seq1  ACAATAAACATGAGGTCTATACC  1172
      ||||||||||||| |||||||||
seq2  ACAATAAACATGA-GTCTATACC  1156


| Home | SequenceCutter | Blast | Download |