BAC Information

Click to search

BAC

Clone NameB6Ng01-265O17
Chromosome2 (Build37)
Map Location 116,269,904 - 116,271,051
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043232, LOC100043236, BC052040, Mrg1, G630016G05Rik, 2810405F15Rik
Downstream geneLOC433464, Tmco5, LOC100043557, LOC241621, Spred1, LOC624574, 2610510H03Rik, Rasgrp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265O17.bB6Ng01-265O17.g
ACCGA069443GA069444
length1,1291,171
definitionB6Ng01-265O17.b B6Ng01-265O17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggcaccaaggctggtgtcttagatgactatgatagaggtgtac
atggagataagaggtccacttagaaaacagcaatgactagaaaatgactc
agcaattttggtgctaagtatatccttccccaaagtcaagtaacagtagc
taagcccaagagcaagtacagaagcattagtcacaaaagaaaaatataga
aacaacacagatgcagatgggttactgtagcacagtcacttatgcactaa
caaattatacagcagccaaaaaccatcacccatagtaacatgaatatgct
taagacttagaagtataaattaaagcaagtccaagccttaacaacttgat
accatttaaaatgaaattaaaataattaagctcaaagtgatatacatcta
ggaatgcaagcagatgtgaaattgtatttttattttaaaggaaaacaggt
aaatgatgtacctatgatcctcagctaagggaaagtggggcttcctggca
aatggaatgatgaaggaagggactaggtatagattaccaacaccatccta
gtttttatattgttcatgcatgtcaatgcacaattataaactcaaaagct
gagtaaggcatgcacaggacagacagtgagagaacgtcagagttagtctg
gtcctgtgtaccgagtactctcaaacctgacaaaatgtgctaatggctta
gatgtggggagtcctctctcccccacacaggatggaaaggtgccacgaac
cccatggtgcttacagtttctaaccaggcactttgaaaatgacaccattt
ttggatatagacagattaagggagggttttttttcttacaggacctaggt
ctacctgcctaggtgcactggccaccatgggctgaactctccatcatcaa
tcattaatccaaagattgcccacagacatgcccacaggtcatcagatgga
ggtagttccacagttgagggtccctctcccagatgatctagtttcaagtt
gataaatctgacaacactgaagactttgagtagttttctctgctgctatc
agcatcatgattgcaacacgtgagtatttgaataatagaaaaacattgtc
ctcacctttcaagagcaatgtctgctgga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagtaccagagctaaagggatcttcaaccctat
agtgacacattatgactaccagtaccctgagctcttgactctagctgcat
atgtatcaaaagatgccttagtcgcatcacttgtaaagaagaagtcatgg
aaacgcagaacttggtgttcctggtcagaatgctcagcctaagtggtaag
tgttggctagatattgctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_116269904_116271051
seq2: B6Ng01-265O17.b_50_1178

seq1  GAATTCAGGCACCAAGGCTGGTGTCTTAGATGACTATGATAGAGGTGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCACCAAGGCTGGTGTCTTAGATGACTATGATAGAGGTGTAC  50

seq1  ATGGAGATAAGAGGTCCACTTAGAAAACAGCAATGACTAGAAAATGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGATAAGAGGTCCACTTAGAAAACAGCAATGACTAGAAAATGACTC  100

seq1  AGCAATTTTGGTGCTAAGTATATCCTTCCCCAAAGTCAAGTAACAGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTTTGGTGCTAAGTATATCCTTCCCCAAAGTCAAGTAACAGTAGC  150

seq1  TAAGCCCAAGAGCAAGTACAGAAGCATTAGTCACAAAAGAAAAATATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCAAGAGCAAGTACAGAAGCATTAGTCACAAAAGAAAAATATAGA  200

seq1  AACAACACAGATGCAGATGGGTTACTGTAGCACAGTCACTTATGCACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACACAGATGCAGATGGGTTACTGTAGCACAGTCACTTATGCACTAA  250

seq1  CAAATTATACAGCAGCCAAAAACCATCACCCATAGTAACATGAATATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTATACAGCAGCCAAAAACCATCACCCATAGTAACATGAATATGCT  300

seq1  TAAGACTTAGAAGTATAAATTAAAGCAAGTCCAAGCCTTAACAACTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTTAGAAGTATAAATTAAAGCAAGTCCAAGCCTTAACAACTTGAT  350

seq1  ACCATTTAAAATGAAATTAAAATAATTAAGCTCAAAGTGATATACATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTAAAATGAAATTAAAATAATTAAGCTCAAAGTGATATACATCTA  400

seq1  GGAATGCAAGCAGATGTGAAATTGTATTTTTATTTTAAAGGAAAACAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCAAGCAGATGTGAAATTGTATTTTTATTTTAAAGGAAAACAGGT  450

seq1  AAATGATGTACCTATGATCCTCAGCTAAGGGAAAGTGGGGCTTCCTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGTACCTATGATCCTCAGCTAAGGGAAAGTGGGGCTTCCTGGCA  500

seq1  AATGGAATGATGAAGGAAGGGACTAGGTATAGATTACCAACACCATCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAATGATGAAGGAAGGGACTAGGTATAGATTACCAACACCATCCTA  550

seq1  GTTTTTATATTGTTCATGCATGTCAATGCACAATTATAAACTCAAAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATATTGTTCATGCATGTCAATGCACAATTATAAACTCAAAAGCT  600

seq1  GAGTAAGGCATGCACAGGACAGACAGTGAGAGAACGTCAGAGTTAGTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGGCATGCACAGGACAGACAGTGAGAGAACGTCAGAGTTAGTCTG  650

seq1  GTCCTGTGTACCGAGTACTCTCAAACCTGACAAAATGTGCTAATGGCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTGTACCGAGTACTCTCAAACCTGACAAAATGTGCTAATGGCTTA  700

seq1  GATGTGGGGAGTCCTCTCTCCCCCACACAGGATGGAAAGGTGCCACGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGGGAGTCCTCTCTCCCCCACACAGGATGGAAAGGTGCCACGAAC  750

seq1  CCCATGGTGCTTACAGTTTCTAACCAGGCACTTTGAAAATGACACCATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGGTGCTTACAGTTTCTAACCAGGCACTTTGAAAATGACACCATTT  800

seq1  TTGGATATAGACAGATTAAGGGAGGGTTTTTTTTCTTACAGGACCTAGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATATAGACAGATTAAGGGAGGGTTTTTTTTCTTACAGGACCTAGGT  850

seq1  CTACCTGCCTAGGTGCACTGGCCACCATGGGCTGAACTCTCCATCATCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGCCTAGGTGCACTGGCCACCATGGGCTGAACTCTCCATCATCAA  900

seq1  TCATTAATCCAAAGATTGCCCACAGACATGCCCACAGGTCAATCAGATGG  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCATTAATCCAAAGATTGCCCACAGACATGCCCACAGGTC-ATCAGATGG  949

seq1  AGGTAGTTCCACAGTTGAGGGTCCCTCTTCCCAGATGATTCTAGTTTCAA  1000
      ||||||||||||||||||||||||||| |||||||||| |||||||||||
seq2  AGGTAGTTCCACAGTTGAGGGTCCCTC-TCCCAGATGA-TCTAGTTTCAA  997

seq1  GTTGATAAAATCTGACCAACACTGAAGACTTTGGAGTAGTTTTCTCTGGC  1050
      |||||| |||||||| |||||||||||||||| |||||||||||||| ||
seq2  GTTGAT-AAATCTGA-CAACACTGAAGACTTT-GAGTAGTTTTCTCT-GC  1043

seq1  TGCTATCAGCCATCAATGAATTGCAACACGTGAGTTAATTTTGAATAATA  1100
      ||||||||| |||| ||| ||||||||||||||||    |||||||||||
seq2  TGCTATCAG-CATC-ATG-ATTGCAACACGTGAGT---ATTTGAATAATA  1087

seq1  AGAAAAAACATTGT-CTCACCTTTCCAAAGAGCAGATGTCTTGGCTGGA  1148
         ||||||||||| ||||||||||  ||||||| ||||||  ||||||
seq2  --GAAAAACATTGTCCTCACCTTTC--AAGAGCA-ATGTCT--GCTGGA  1129