BAC Information

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BAC

Clone NameB6Ng01-266D10
Chromosome2 (Build37)
Map Location 95,788,289 - 95,789,418
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042843
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266D10.bB6Ng01-266D10.g
ACCGA069664GA069665
length1,2171,112
definitionB6Ng01-266D10.b B6Ng01-266D10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttaatccacttagatttgaccttagtacacggagataggaatg
gatggattcacattcttctacatgataaccaccagttgaaccagcaccat
ttgttgaaaatgctgtcttttttccactggatggttttagctcccttgtc
aaagatcaagtgaccataggtgtgtgggttcatctctaggtcttcaattc
tgttccgttggtctacttgtctgttgctataccagtaccatgccgatttt
atcacaattgctctgtagtacagctttaggtaaggcatggtgattccacc
agggttcttttaccctttagaagagtttttgctatcctacgttttttgtt
attccagatgaatctgccaattgccctttctaattcgttgaagaattgag
ttgggattttgatctggattgaatttaatctgtagactgcttttggcaag
atagccatttttactatattgatcctgtcaatccatgagcatgggagatc
tttccatcttctgaaatcttcttcaatttctttcttcagagacttgaaat
tcttatcatacagatcttctacttccttagttagagtcacgccaaggtat
tttattttatttgtggctattgagaagggtgttgtttccctaatttcttt
ctcagcctgtttatcctttatgtacagaaaggccattgacttgcttgagt
taattttatatccagctacttcattgaagctgtttatcaggtttaggagt
tctctgctggaatttttagggtcacttatatatactatcatatcatctgc
aaaaagtgatattttgacttcatcttgtctaatttgtatctccttgatct
ccttttgttgtcaaattgctctggctaggacttcaagtactatgttgaaa
aggtagggagaaagtgggcagccttttctagtccctgattttagtgggga
ttgcttccagcttctcaccgtttaatttgttgttggctactggtttgctg
tagattgctttcatcatggtttaagtatgggtctgattctgatctttcca
agacttttctatgatgggtgtggattttgtcaaatgctttctccaatctt
acgagatgatcatgtgatttggtcttgagtttggtatgtaagggaataac
attgatggattccttatttggaacaattccctgcaatccttgggaggaac
tctcctcttgtctcagc

gaattcaaaaataatatgtttaatgtgaagagtgagagagaattcagagg
tcagagccccttttctcagaaggtatgcacttcttaaacaagcaataagt
gtgccctgcaaacaaagtgcaatgcttgcaaagaggcaaacaattaaaaa
gtgttctcacatgtatttttcctctagaggaccataagctattgattgca
ggcacaagataagaaaatgaaatctcccctaatggtgagacgccaggatt
atgtgcatgaaaagtttccttcacaagcttatcaggcaacaaaaaaattg
aatgtgttttgcactgaaatcagacaaatactttcaggggtgtacattcc
atgccgcacagaggaaaggccaataaaagcaattaccaggcagttgagct
gctcattatgtgatcaacataagcaaataatatggtctgggatcaatcac
ctgcttctcctggaagagcaggaagtttggtgcatgaagtaggagactct
gatgcatcagtactgtgctctcccagtcagcccctgaagaggctatcagt
ttctgtgatacacacacctatcgactcaggggctgaaaaagcgccctcaa
ttgtcattcaattggtagatagaggaaagggaagagtaagagctaggctg
tctcagtagagcaccctaatgtccttgaagttgggaaagctcagaaaatt
tctccaggagctgaatccaaaagagtaagaaatgagtctagaaactagtt
agtacatgaaaacaacacagcactatttgaggcaaagaagggggctgtga
aaatcagaagaggcatagagaggtagtagagaactgacaacgtatgactt
gcaataatagttatttgaacagtaataacatataataacaagcaaacata
tctaataggcatctacatgtcagtgtgagtgcttattgtactctgttaaa
ggacccttaagcagacatttcataactcatcatttctacagaaaatacat
gtagactctctgtttatagacccaatgctgggcagaagatatcatcactc
ccacatctctgtgtaaggtggcacagagggtatagttctcaagaacagca
cctcagaaatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_95788289_95789418
seq2: B6Ng01-266D10.g_65_1176 (reverse)

seq1  ACATTTCTGAGGTGCCTTGTCTCTGAGAACTATACCCCTCTTGTGCCCAC  50
      |||||||||||||||  |||   ||||||||||| ||||| |||| ||||
seq2  ACATTTCTGAGGTGC--TGTTCTTGAGAACTATA-CCCTC-TGTG-CCAC  45

seq1  CTCTACCACAGAGATTGTGGGAGTGAATGATATCTGTCCTTGCCCAGCAA  100
      || || |||||||| |||||||||| ||||||||| ||  |||||||| |
seq2  CT-TA-CACAGAGA-TGTGGGAGTG-ATGATATCT-TC--TGCCCAGC-A  87

seq1  TTGGGTCTAATAAACAGAGAGTCTACATGTATTTTCTGTAGAAATGATTG  150
      |||||||| |||||||||||||||||||||||||||||||||||||| ||
seq2  TTGGGTCT-ATAAACAGAGAGTCTACATGTATTTTCTGTAGAAATGA-TG  135

seq1  AGTTATGGAAATGTCTGCTTAAGGGTCCTTTAACAGAGTACAATAAGCAC  200
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAT-GAAATGTCTGCTTAAGGGTCCTTTAACAGAGTACAATAAGCAC  184

seq1  TCACACTGACATGTAGATGCCTATTAGATATTGTTTGCTTGTTATTATAT  250
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCACACTGACATGTAGATGCCTATTAGATA-TGTTTGCTTGTTATTATAT  233

seq1  GTTATTACTGTTCAAATAACTATTATTGCAAGTCATACGTTGTCAGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTACTGTTCAAATAACTATTATTGCAAGTCATACGTTGTCAGTTCT  283

seq1  CTACTACCTCTCTATGCCTCTTCCTGATTTTCACAGCCCCCTTCTTTGCC  350
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTACTACCTCTCTATGCCTCTT-CTGATTTTCACAGCCCCCTTCTTTGCC  332

seq1  TCAAATAGTGCTGTGTTGTTTTCATGTACTAACTAGTTTCTAGACTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAGTGCTGTGTTGTTTTCATGTACTAACTAGTTTCTAGACTCATT  382

seq1  TCTTACTCTTTTGGATTCAGCTCCTGGAGAAATTTTCTGAGCTTTCCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTCTTTTGGATTCAGCTCCTGGAGAAATTTTCTGAGCTTTCCCAA  432

seq1  CTTCAAGGACATTAGGGTGCTCTACTGAGACAGCCTAGCTCTTACTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGGACATTAGGGTGCTCTACTGAGACAGCCTAGCTCTTACTCTTC  482

seq1  CCTTTCCTCTATCTACCAATTGAATGACAATTGAGGGCGCTTTTTCAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCTCTATCTACCAATTGAATGACAATTGAGGGCGCTTTTTCAGCC  532

seq1  CCTGAGTCGATAGGTGTGTGTATCACAGAAACTGATAGCCTCTTCAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTCGATAGGTGTGTGTATCACAGAAACTGATAGCCTCTTCAGGGG  582

seq1  CTGACTGGGAGAGCACAGTACTGATGCATCAGAGTCTCCTACTTCATGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGGGAGAGCACAGTACTGATGCATCAGAGTCTCCTACTTCATGCA  632

seq1  CCAAACTTCCTGCTCTTCCAGGAGAAGCAGGTGATTGATCCCAGACCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTTCCTGCTCTTCCAGGAGAAGCAGGTGATTGATCCCAGACCATA  682

seq1  TTATTTGCTTATGTTGATCACATAATGAGCAGCTCAACTGCCTGGTAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGCTTATGTTGATCACATAATGAGCAGCTCAACTGCCTGGTAATT  732

seq1  GCTTTTATTGGCCTTTCCTCTGTGCGGCATGGAATGTACACCCCTGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTATTGGCCTTTCCTCTGTGCGGCATGGAATGTACACCCCTGAAAG  782

seq1  TATTTGTCTGATTTCAGTGCAAAACACATTCAATTTTTTTGTTGCCTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTCTGATTTCAGTGCAAAACACATTCAATTTTTTTGTTGCCTGAT  832

seq1  AAGCTTGTGAAGGAAACTTTTCATGCACATAATCCTGGCGTCTCACCATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGTGAAGGAAACTTTTCATGCACATAATCCTGGCGTCTCACCATT  882

seq1  AGGGGAGATTTCATTTTCTTATCTTGTGCCTGCAATCAATAGCTTATGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGATTTCATTTTCTTATCTTGTGCCTGCAATCAATAGCTTATGGT  932

seq1  CCTCTAGAGGAAAAATACATGTGAGAACACTTTTTAATTGTTTGCCTCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGAGGAAAAATACATGTGAGAACACTTTTTAATTGTTTGCCTCTT  982

seq1  TGCAAGCATTGCACTTTGTTTGCAGGGCACACTTATTGCTTGTTTAAGAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCATTGCACTTTGTTTGCAGGGCACACTTATTGCTTGTTTAAGAA  1032

seq1  GTGCATACCTTCTGAGAAAAGGGGCTCTGACCTCTGAATTCTCTCTCACT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATACCTTCTGAGAAAAGGGGCTCTGACCTCTGAATTCTCTCTCACT  1082

seq1  CTTCACATTAAACATATTATTTTTGAATTC  1130
      ||||||||||||||||||||||||||||||
seq2  CTTCACATTAAACATATTATTTTTGAATTC  1112


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