BAC Information

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BAC

Clone NameB6Ng01-267E10
Chromosome2 (Build37)
Map Location 36,660,685 - 36,661,792
singlet/doubletsinglet
Overlap genenone
Upstream geneTtll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348, Olfr50
Downstream geneRpl18p, Olfr3, Olfr349-ps1, Olfr350, Olfr351, Olfr352, Olfr353, Olfr354, Olfr355, Olfr356, Olfr357, Olfr358, Olfr359-ps1, Olfr360, Olfr361, Olfr362, Olfr364-ps1, Olfr365, Olfr366, Olfr367, Olfr368, Pdcl, Rc3h2, Zbtb6, Zbtb26, Rabgap1, Gpr21, 6430510M02Rik, Strbp, LOC639491, Dennd1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267E10.bB6Ng01-267E10.g
ACCGA070450GA070451
length4761,114
definitionB6Ng01-267E10.b B6Ng01-267E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatgatgtgtactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaacaaagaccaaagcttggacactttgccccttcttagaattgggaa
aaaaacacccatggaaggagttacagagacaaagtttggagctgagacga
aaggatggaccatctagagattgccatatccggggatccatcccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagctgtctcttgtgagatatgccggggcctaacaaaca
cagaagtgaatgctcacattcagctattggatggatcacagggatcccaa
tggaggagctagagaaagtaaccaaggagctaaagggatctgcaacccta
taggtggaacaacaatatgaactaac
gaattcaatgctcatgtccagtggcttggagtgtttatatgtgcataagc
aaggatcctaggctttggggttacacaacaagggaggtgacaaggggaag
ccatctttaaacctgatattgtttgttcagacagtgggacagaatcatgc
aattgaaaggggggactcttctgatccgggaagtaactttatggtactat
ctggaactagtgtgtttttacaaactgatcacagctgtcttaattgccct
tctttcatggcccaagaggggcacttattttttcaagaatgtttggtcct
tgtttccctcaaggataggagccagctgcactgaagaaatgttagttatt
aaggagagtgacagccttgatgacccagaggctaggatatgttgcccttt
ctctgttctcaaagctggcatctaccgctcctcaggtggggctgttcatt
atgtggaagggagatctgtgcaagtggtgagaaaatgcataggcaggttt
cctgtgtcttttcattcatacagttctttctcccatacccaatcccatct
cctctgagaagggttggttccccccaggcacctcaatcactgcagggcta
ggcacatcctctcctactgaagccagacaaggcagctcagttaggggaac
aagatacacaggtaggcaatagagtcagagacaagcccctgctccagttg
ctgggggaccctcatgaagaccaagctacgtatctgctacatacacagac
atacctatgttcagtccatatatgctctttggtaggggataatttggtag
gggataataatttggaaattcatggtgtccttgttttatttattttattt
attttacaatccaggcatttccccactccccactgttgggcattttatct
aaggtcacttccattgagtcctgagagtctttaacctcactgggtctctg
gtactttctagagagtctccgccaccctcacaccttctgaggctccatta
ttccatttcattctgctccgcgtcctgggaattcccttctgttccccccc
ccccatacatgaatcctgttcacgtttcccctttgctctcctctcgaccc
aagttcactacctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_36660685_36661792
seq2: B6Ng01-267E10.g_69_1182

seq1  GAATTCAATGCTCATGTCCAGTGGCTTGGAGTGTTTATATGTGCATAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCTCATGTCCAGTGGCTTGGAGTGTTTATATGTGCATAAGC  50

seq1  AAGGATCCTAGGCTTTGGGGTTACACAACAAGGGAGGTGACAAGGGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCCTAGGCTTTGGGGTTACACAACAAGGGAGGTGACAAGGGGAAG  100

seq1  CCATCTTTAAACCTGATATTGTTTGTTCAGACAGTGGGACAGAATCATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTTAAACCTGATATTGTTTGTTCAGACAGTGGGACAGAATCATGC  150

seq1  AATTGAAAGGGGGGACTCTTCTGATCCGGGAAGTAACTTTATGGTACTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAAGGGGGGACTCTTCTGATCCGGGAAGTAACTTTATGGTACTAT  200

seq1  CTGGAACTAGTGTGTTTTTACAAACTGATCACAGCTGTCTTAATTGCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTAGTGTGTTTTTACAAACTGATCACAGCTGTCTTAATTGCCCT  250

seq1  TCTTTCATGGCCCAAGAGGGGCACTTATTTTTTCAAGAATGTTTGGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATGGCCCAAGAGGGGCACTTATTTTTTCAAGAATGTTTGGTCCT  300

seq1  TGTTTCCCTCAAGGATAGGAGCCAGCTGCACTGAAGAAATGTTAGTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCCTCAAGGATAGGAGCCAGCTGCACTGAAGAAATGTTAGTTATT  350

seq1  AAGGAGAGTGACAGCCTTGATGACCCAGAGGCTAGGATATGTTGCCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGTGACAGCCTTGATGACCCAGAGGCTAGGATATGTTGCCCTTT  400

seq1  CTCTGTTCTCAAAGCTGGCATCTACCGCTCCTCAGGTGGGGCTGTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCTCAAAGCTGGCATCTACCGCTCCTCAGGTGGGGCTGTTCATT  450

seq1  ATGTGGAAGGGAGATCTGTGCAAGTGGTGAGAAAATGCATAGGCAGGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAAGGGAGATCTGTGCAAGTGGTGAGAAAATGCATAGGCAGGTTT  500

seq1  CCTGTGTCTTTTCATTCATACAGTTCTTTCTCCCATACCCAATCCCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCTTTTCATTCATACAGTTCTTTCTCCCATACCCAATCCCATCT  550

seq1  CCTCTGAGAAGGGTTGGTTCCCCCCAGGCACCTCAATCACTGCAGGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGAAGGGTTGGTTCCCCCCAGGCACCTCAATCACTGCAGGGCTA  600

seq1  GGCACATCCTCTCCTACTGAAGCCAGACAAGGCAGCTCAGTTAGGGGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATCCTCTCCTACTGAAGCCAGACAAGGCAGCTCAGTTAGGGGAAC  650

seq1  AAGATACACAGGTAGGCAATAGAGTCAGAGACAAGCCCCTGCTCCAGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATACACAGGTAGGCAATAGAGTCAGAGACAAGCCCCTGCTCCAGTTG  700

seq1  CTGGGGGACCCTCATGAAGACCAAGCTACGTATCTGCTACATACACAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGACCCTCATGAAGACCAAGCTACGTATCTGCTACATACACAGAC  750

seq1  ATACCTATGTTCAGTCCATATATGCTCTTTGGTAGGGGATAATTTGGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTATGTTCAGTCCATATATGCTCTTTGGTAGGGGATAATTTGGTAG  800

seq1  GGGATAATAATTTGGAAATTCATGGTGTCCTTGTTTTATTTATTTTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAATAATTTGGAAATTCATGGTGTCCTTGTTTTATTTATTTTATTT  850

seq1  A-TTTACAATCCAGGCATTTCCCCACTCCCCACTGTTGGGCATTTTATCT  899
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACAATCCAGGCATTTCCCCACTCCCCACTGTTGGGCATTTTATCT  900

seq1  AAGGTCACTTCCATTGAGTCCTGAGAGTCTTTAACCTCACT-GGTCTCTG  948
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGGTCACTTCCATTGAGTCCTGAGAGTCTTTAACCTCACTGGGTCTCTG  950

seq1  GTACTTTCTAGAGAGTCT-CGCCA-CCTCACACCTTCTGAGGCTCCATAT  996
      |||||||||||||||||| ||||| |||||||||||||||||||||||  
seq2  GTACTTTCTAGAGAGTCTCCGCCACCCTCACACCTTCTGAGGCTCCATTA  1000

seq1  TTCCA-TTCATTCTGCT-CGCCTTCTGGG-ATTCTCTTCTGTTCCCCCCC  1043
      ||||| ||||||||||| ||| | ||||| |||| |||||||||||||||
seq2  TTCCATTTCATTCTGCTCCGCGTCCTGGGAATTCCCTTCTGTTCCCCCCC  1050

seq1  CCCCAATACATG-ATCCTGTTCACCTTTTCCCCTTTGCTCTCCTCTCCAA  1092
      |||| ||||||| |||||||||| | |||||||||||||||||||| | |
seq2  CCCC-ATACATGAATCCTGTTCA-CGTTTCCCCTTTGCTCTCCTCT-CGA  1097

seq1  CCCAAG-TCACTACCTC  1108
      |||||| ||||||||||
seq2  CCCAAGTTCACTACCTC  1114