BAC Information

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BAC

Clone NameB6Ng01-268F08
Chromosome2 (Build37)
Map Location 87,878,122 - 87,878,789
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73
Downstream geneOlfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268F08.bB6Ng01-268F08.g
ACCGA071217GA071218
length6821,178
definitionB6Ng01-268F08.b B6Ng01-268F08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattagtttttaagaacatggaatggtatttaataaatatttat
ggaatagtcattcatttatgaactttgatgatactggtgaactaaaaaat
gaaattcatgcatttgtgcatgttttttcttttcaaggaaaaacaagctc
taaaataagtacaataaaaacaaatttgaaacctacatttcaaccatgcc
cagaaagtaaaacagtacatagagtaattgcttgaatgttagagaaagtt
cagagaagtttgtctggattctaagtagtgaagcactttggactatatcc
aaaatgttcatttttaagaaaaatttaaaaagcataatattaagtagatg
agtcagtacagtacaaagaaaacaggtgtaaaatatcctatttatcttgg
gcttatgttggtaaagttttcatcatctttagtgagccataatgacctga
gagcagaatatccacatatcccagacatactccgtgtactgtagaaagag
aacatcatggattgaaaaaatcttaaataattctatactaatatagattt
ctaaaatatattatatctaacagtaggagaagcctaatgaggtcattctt
tgtttgtggaacaatatgagttatataatatatatatatatatatatata
tatatatatatatatatgtatacacacacaca
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
agacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaagggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatttgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagattaatggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggtt
atcaatcatgtcccactataagctccattgccttgacgtgggaatcctct
gaaggacagcaagggaaattcataccttatgtgctccactcccggttaac
ctctggggaagggatattatgcagcatttgggccttattttgtccaatga
aaacgccccatcgggagggtattcaactaaagcaaaaaatatcatggcaa
agatgggttataaagaatgaaaagggttaggacatcaagaacaggaagat
agagcccatctcacctaatggaaaccaagacagacagggtctgggtttcc
ttagcgccattgggcagcacgaccataccatgaaaacagggaccagtgtt
gggttctcaatgcactttctctgaaaactagaagctgtgattcactgtag
agacataaactagcatatgacttttacctcacctggaatactcatttttg
tattaagaaaaggtcaggaactgaaactgctcatgacctcagcatatgag
caatgaccttatttggtgccagctgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87878122_87878789
seq2: B6Ng01-268F08.b_46_713 (reverse)

seq1  CATATATATATATATATATATATATATATATATATATATATTATATAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATATATATATATATATATATATATATATATATATTATATAACT  50

seq1  CATATTGTTCCACAAACAAAGAATGACCTCATTAGGCTTCTCCTACTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGTTCCACAAACAAAGAATGACCTCATTAGGCTTCTCCTACTGTT  100

seq1  AGATATAATATATTTTAGAAATCTATATTAGTATAGAATTATTTAAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAATATATTTTAGAAATCTATATTAGTATAGAATTATTTAAGATT  150

seq1  TTTTCAATCCATGATGTTCTCTTTCTACAGTACACGGAGTATGTCTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATCCATGATGTTCTCTTTCTACAGTACACGGAGTATGTCTGGGA  200

seq1  TATGTGGATATTCTGCTCTCAGGTCATTATGGCTCACTAAAGATGATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGATATTCTGCTCTCAGGTCATTATGGCTCACTAAAGATGATGAA  250

seq1  AACTTTACCAACATAAGCCCAAGATAAATAGGATATTTTACACCTGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTACCAACATAAGCCCAAGATAAATAGGATATTTTACACCTGTTTT  300

seq1  CTTTGTACTGTACTGACTCATCTACTTAATATTATGCTTTTTAAATTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTACTGTACTGACTCATCTACTTAATATTATGCTTTTTAAATTTTT  350

seq1  CTTAAAAATGAACATTTTGGATATAGTCCAAAGTGCTTCACTACTTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAATGAACATTTTGGATATAGTCCAAAGTGCTTCACTACTTAGAA  400

seq1  TCCAGACAAACTTCTCTGAACTTTCTCTAACATTCAAGCAATTACTCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACAAACTTCTCTGAACTTTCTCTAACATTCAAGCAATTACTCTAT  450

seq1  GTACTGTTTTACTTTCTGGGCATGGTTGAAATGTAGGTTTCAAATTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTTTTACTTTCTGGGCATGGTTGAAATGTAGGTTTCAAATTTGTT  500

seq1  TTTATTGTACTTATTTTAGAGCTTGTTTTTCCTTGAAAAGAAAAAACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTACTTATTTTAGAGCTTGTTTTTCCTTGAAAAGAAAAAACATG  550

seq1  CACAAATGCATGAATTTCATTTTTTAGTTCACCAGTATCATCAAAGTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGCATGAATTTCATTTTTTAGTTCACCAGTATCATCAAAGTTCA  600

seq1  TAAATGAATGACTATTCCATAAATATTTATTAAATACCATTCCATGTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAATGACTATTCCATAAATATTTATTAAATACCATTCCATGTTCT  650

seq1  TAAAAACTAATGGAATTC  668
      ||||||||||||||||||
seq2  TAAAAACTAATGGAATTC  668