BAC Information

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BAC

Clone NameB6Ng01-268I01
Chromosome2 (Build37)
Map Location 85,440,855 - 85,441,962
singlet/doubletsinglet
Overlap geneOlfr999-ps1
Upstream geneCtnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998
Downstream geneOlfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268I01.bB6Ng01-268I01.g
ACCGA071341GA071342
length6871,140
definitionB6Ng01-268I01.b B6Ng01-268I01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcacatacctaaacataatcaaagcagtatacagctaacca
atagccaaattaagataaatgaagagaaatttgaagatatccctctaaaa
tctgggacaagacaaggctgttcgctctctctttactttttcaatatcac
acttgaagtggtaactagagcaattagacaacaaaagaagttcaaaggta
tacaaattggaaaggacaaaggcaaatttcattatttgcagatggtttga
taacataagcaaccccaaaaattccaccagaaatctcctacagctgataa
acaacttaagcaaagtggccggatataaaattaattcaatcaagtcagta
gctgtattatgctcaaaggataagcaagctaagaaagaaattagggaaac
gacacccttcataatggtcacaaacaatataaaatatcttgatgtgattc
taaccaaacaagtgaaagatctgtatgacaagaacttcaagtccttgaag
aaagaaatggaaaagacctcagaatgtgaaaagatctcccaggctcatgg
atcagcaggattaacaaaaccaaagtatggatgcttcaatcctacttaga
aggggaaacaaagaaggagggagggatcttgaatggatggcggaagggga
acaggatcagttatggtaggagacaggagagatgtcc
gaattcctggatgaatgttcacccattgactgcacaaaataaagactatc
atccggagctatctgtaactcaaagccaggtccctaaagagcttagtctc
aggagctcactcctaaagggacaaaattaacataatttcaacagcatttc
attggtagcttccttataacttctatgaacatctgtttctaaaatgaaat
gtctccatgaagctatgttaacatcagacaaagtaagtactagagtaaat
aaactgaccaaggagagaggagacagacctataatatggacaaatggacc
aacttatcaagaacacttaataattctaaaatcaagtgtctaaaaataaa
acttcaaaatagtgggaagctgaagaactgatggggcagaaaatataaac
agtctcaaaaatggagttgacaatatcaacatttgtcttctaagaaccat
aaaacaaatattgaaacagtccctaagtcactaattgattgaagaaagta
gctccatgggaaaatgcatcttccaccaagctgaagagctgagttaagtc
gctagaatgtacattttgaaaggtgaaaaccaactctgaacacatgcatg
cccaaataaatcaataaataaataagtaggtaaatgctgaaattttaaaa
tgagaatgatattatagacatacactttttctttcaaatcaagttcatgt
tgctttagtttcatgaaatttttggctttatgactaattaaaaaatattg
acacagttaatattatgtatgtatttgctttttgtttctaagtatatttt
tgccattgtacaaatatgttcttcaataagtatgttaagtatatatatat
atatatatatatatatatatatatatatatatatattctcagtccacctt
cattaaattttttcaacacttgagatgtgtcacaaaaaacacagacaggc
agtaaaaagaatacttgaaaaattcttcatttttcttcaaattaatctat
ttatttgaaaagaaacctattattatgtctttttttaaaagtaataataa
tttgggcactgaacaaactaaagcattgccaataaatagagttttggtct
ttaccaatcttcttgaaaaaatgttcccttttgtactttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85440855_85441962
seq2: B6Ng01-268I01.g_65_1204

seq1  GAATTCCTGGATGAATGTTCACCCATTGACTGCACAAAATAAAGACTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGATGAATGTTCACCCATTGACTGCACAAAATAAAGACTATC  50

seq1  ATCCGGAGCTATCTGTAACTCAAAGCCAGGTCCCTAAAGAGCTTAGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGGAGCTATCTGTAACTCAAAGCCAGGTCCCTAAAGAGCTTAGTCTC  100

seq1  AGGAGCTCACTCCTAAAGGGACAAAATTAACATAATTTCAACAGCATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTCACTCCTAAAGGGACAAAATTAACATAATTTCAACAGCATTTC  150

seq1  ATTGGTAGCTTCCTTATAACTTCTATGAACATCTGTTTCTAAAATGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTAGCTTCCTTATAACTTCTATGAACATCTGTTTCTAAAATGAAAT  200

seq1  GTCTCCATGAAGCTATGTTAACATCAGACAAAGTAAGTACTAGAGTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCATGAAGCTATGTTAACATCAGACAAAGTAAGTACTAGAGTAAAT  250

seq1  AAACTGACCAAGGAGAGAGGAGACAGACCTATAATATGGACAAATGGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGACCAAGGAGAGAGGAGACAGACCTATAATATGGACAAATGGACC  300

seq1  AACTTATCAAGAACACTTAATAATTCTAAAATCAAGTGTCTAAAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATCAAGAACACTTAATAATTCTAAAATCAAGTGTCTAAAAATAAA  350

seq1  ACTTCAAAATAGTGGGAAGCTGAAGAACTGATGGGGCAGAAAATATAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAATAGTGGGAAGCTGAAGAACTGATGGGGCAGAAAATATAAAC  400

seq1  AGTCTCAAAAATGGAGTTGACAATATCAACATTTGTCTTCTAAGAACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAAAAATGGAGTTGACAATATCAACATTTGTCTTCTAAGAACCAT  450

seq1  AAAACAAATATTGAAACAGTCCCTAAGTCACTAATTGATTGAAGAAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAATATTGAAACAGTCCCTAAGTCACTAATTGATTGAAGAAAGTA  500

seq1  GCTCCATGGGAAAATGCATCTTCCACCAAGCTGAAGAGCTGAGTTAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCATGGGAAAATGCATCTTCCACCAAGCTGAAGAGCTGAGTTAAGTC  550

seq1  GCTAGAATGTACATTTTGAAAGGTGAAAACCAACTCTGAACACATGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAATGTACATTTTGAAAGGTGAAAACCAACTCTGAACACATGCATG  600

seq1  CCCAAATAAATCAATAAATAAATAAGTAGGTAAATGCTGAAATTTTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATAAATCAATAAATAAATAAGTAGGTAAATGCTGAAATTTTAAAA  650

seq1  TGAGAATGATATTATAGACATACACTTTTTCTTTCAAATCAAGTTCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGATATTATAGACATACACTTTTTCTTTCAAATCAAGTTCATGT  700

seq1  TGCTTTAGTTTCATGAAATTTTTGGCTTTATGACTAATTAAAAAATATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAGTTTCATGAAATTTTTGGCTTTATGACTAATTAAAAAATATTG  750

seq1  ACACAGTTAATATTATGTATGTATTTGCTTTTTGTTTCTAAGTATATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTTAATATTATGTATGTATTTGCTTTTTGTTTCTAAGTATATTTT  800

seq1  TGCCATTGTACAAATATGTTCTTCAATAAGTATGTTAAGTATATATATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTGTACAAATATGTTCTTCAATAAGTATGTTAAGTATATATATAT  850

seq1  ATATATATATATATATATATATATATATATATATATTCTCAGTCCACCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATTCTCAGTCCACCTT  900

seq1  CATTAAA-TTTTTCAACAC-TGA-ATGTGTCAC-AAAAACACAGACAGGC  946
      ||||||| ||||||||||| ||| ||||||||| ||||||||||||||||
seq2  CATTAAATTTTTTCAACACTTGAGATGTGTCACAAAAAACACAGACAGGC  950

seq1  AGTAAAA--GATACT--GAAAATTCTTCA-TTTTCTTCAAA-TAATCTA-  989
      |||||||   |||||   ||||||||||| ||||||||||| ||||||| 
seq2  AGTAAAAAGAATACTTGAAAAATTCTTCATTTTTCTTCAAATTAATCTAT  1000

seq1  TTAATTGAAA--GAACCTAT--ATATGTCTTTTT---AAAGT----ATAT  1028
      ||| ||||||   |||||||   |||||||||||   |||||    ||| 
seq2  TTATTTGAAAAGAAACCTATTATTATGTCTTTTTTTAAAAGTAATAATAA  1050

seq1  ATTTGGCACTGA--CAACTAAGGCATAGC--AT-AATAGAGTTT--GGCC  1071
       || ||||||||   |||||| |||| ||  || ||||||||||  | | 
seq2  TTTGGGCACTGAACAAACTAAAGCATTGCCAATAAATAGAGTTTTGGTCT  1100

seq1  TTACCAATC-TCTTG-AAAAATGTTTCC-TTTGTACTTTT  1108
      ||||||||| ||||| ||||||||| || |||||||||||
seq2  TTACCAATCTTCTTGAAAAAATGTTCCCTTTTGTACTTTT  1140