BAC Information

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BAC

Clone NameB6Ng01-269A03
Chromosome2 (Build37)
Map Location 128,082,848 - 128,209,651
singlet/doubletdoublet
Overlap geneLOC100043424
Upstream geneTmem127, ENSMUSG00000074822, Stard7, Dusp2, Astl, Adra2b, A530057A03Rik, Fahd2a, Kcnip3, Prom2, Zfp661, Mrps5, Mal, LOC668892, Mall, Nphp1, 1500011K16Rik, Bub1, Acoxl, Bcl2l11
Downstream geneLOC100043729, LOC383791, LOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461, LOC100043431, Slc20a1, A730036I17Rik, LOC671466, Ckap2l, Il1a, Il1b, OTTMUSG00000015529, LOC668896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269A03.bB6Ng01-269A03.g
ACCGA071721GA071722
length1,1461,154
definitionB6Ng01-269A03.b B6Ng01-269A03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,082,848 - 128,084,011)(128,208,480 - 128,209,651)
sequence
gaattcagtgacatcagcgaaagagaagagccacctccttagagtctgtc
cttaaaaaacttatcagggctagagagatgacttgattggtaaagtactt
accacaaagcatgagcagctgagtgtggattcagagaatccgtgtcaaag
ctgagcgtgacatcacacacctgtcagcccagggccggggaggggaggta
gacacaggaggatccttggggcttatccgccaaccagtcagactggcaag
tgagctctaggttccgtgaggggtttatctgtcagaacctcatggacagt
tagttggcttccatcatgtggggagcagaccaagcctttaggcaacaaca
ataccattgcttcagcctttgtcattcctgggatctttgttcggttacac
ccggattcatggcgattaagaaatttctcagaattgacgcagatagaagt
gagagtaaggtgcaggctctgggtccaaacacctgctgggctgttctctt
catcttcatctgacgcccacattttaatggcaatgactggactgtcacag
agatcaggaaggggttgcctgtcatgctgtccttccttgcatccttctct
gggtgcggctgtatacctgctttatgtggacttaaaatttacaacccaga
cagagccttgttctgtgtactccctcaatataataaagcaaaaacaaaca
aacacacacagcactcactagctttgggggagtgtctgcttcctcagcag
agggtaggtcccctaagggaccaatgggcatgtcgctaggagaggaaaca
caactggatgtgtctgtttacacaaccaacaaacacagctaacagaattt
aaaggctttgtctgagtactttaaaactttcccattgaaagaatgaagac
aggacagaaaccaacacccctgaccccctgtgatgcttagagacacttgc
ggtgggactgatggattcctacagtcccaagcgttaccccagggactaga
gccatgtggacttttcagtcaattctctcaactctgtcttgctcactcct
catccgactggatgcccatggttacttcgtgcgtctaaccgtttcacaga
agcaaggcagctaagctgtgcggtgacgcaggaatggcatcatcat
gaattcttagaaagtgaagtctgcgtgcctctaagttcacagaagaaatc
aaagctactgcttgttactcagaagatcagcacagagcaggggtcatccg
tccctgtcattgtccctgagctgctagcttccctgcagagcaggctgttc
tcttaggtttggagggcaaccaataagggaaagttttttttaaaccataa
tttttataattttattgagataaaatttacaaaatatatcatcatcattt
agaaaaagttatgcactttattacaaaacatgcttgcaaataaaaaaata
tcacatatcaaaattaaccagacccagagtctatatgtctcgacagactt
ccatacagtaacagcagctctccagaacggaaactgtggagcttcacgtt
ggatttttacactcttattattgaatacatttgtgtatactttttggtta
aaaaattttaatgaataaatacgacttttaaaagcatgcatacttgtgtg
gtgccaagtgatatgtgcatacattgtgcaatgtctaaatcagagtcaag
acaactttctcctggctgggaatatagacacgatggtacagtgcctcata
tacattccagatttgattcctagaacaataataaataataataataacag
aacaacatagtctttaaaagctttcaattacttatggtaaaaaatcattt
aagaatatgatatacatacatgcacatatatgtatatgatatatgtgcat
atgtatatattatacacactgaaataataccacgattttacaaaaaacag
ctaatggctggaaagctctgggttcagagaagagactttttgaaaaataa
aaaatctttagaaacaagttagcacagttttgtaaaatactctctcttac
atcggttgaaagccacgcagccactgcacataaacccttgcttgtgttaa
aggtcctgggtcagtatccctcaaccttccacagctgaaaggaaaagaag
aagggctgtgagagccttgaagaccatgtccttctgctgagtatctgtac
atccaggatgagctctgacaggcaggtggtggttgttacagggtagatct
ataggttcggattatcctgattatatttcggctcaggtttcattccacaa
atta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_128082848_128084011
seq2: B6Ng01-269A03.b_43_1188

seq1  GAATTCAGTGACATCAGCGAAAGAGAAGAGCCACCTCCTTAGAGTCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGACATCAGCGAAAGAGAAGAGCCACCTCCTTAGAGTCTGTC  50

seq1  CTTAAAAAACTTATCAGGGCTAGAGAGATGACTTGATTGGTAAAGTACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAAACTTATCAGGGCTAGAGAGATGACTTGATTGGTAAAGTACTT  100

seq1  ACCACAAAGCATGAGCAGCTGAGTGTGGATTCAGAGAATCCGTGTCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAAGCATGAGCAGCTGAGTGTGGATTCAGAGAATCCGTGTCAAAG  150

seq1  CTGAGCGTGACATCACACACCTGTCAGCCCAGGGCCGGGGAGGGGAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCGTGACATCACACACCTGTCAGCCCAGGGCCGGGGAGGGGAGGTA  200

seq1  GACACAGGAGGATCCTTGGGGCTTATCCGCCAACCAGTCAGACTGGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGGAGGATCCTTGGGGCTTATCCGCCAACCAGTCAGACTGGCAAG  250

seq1  TGAGCTCTAGGTTCCGTGAGGGGTTTATCTGTCAGAACCTCATGGACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTAGGTTCCGTGAGGGGTTTATCTGTCAGAACCTCATGGACAGT  300

seq1  TAGTTGGCTTCCATCATGTGGGGAGCAGACCAAGCCTTTAGGCAACAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGGCTTCCATCATGTGGGGAGCAGACCAAGCCTTTAGGCAACAACA  350

seq1  ATACCATTGCTTCAGCCTTTGTCATTCCTGGGATCTTTGTTCGGTTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATTGCTTCAGCCTTTGTCATTCCTGGGATCTTTGTTCGGTTACAC  400

seq1  CCGGATTCATGGCGATTAAGAAATTTCTCAGAATTGACGCAGATAGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGATTCATGGCGATTAAGAAATTTCTCAGAATTGACGCAGATAGAAGT  450

seq1  GAGAGTAAGGTGCAGGCTCTGGGTCCAAACACCTGCTGGGCTGTTCTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTAAGGTGCAGGCTCTGGGTCCAAACACCTGCTGGGCTGTTCTCTT  500

seq1  CATCTTCATCTGACGCCCACATTTTAATGGCAATGACTGGACTGTCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCATCTGACGCCCACATTTTAATGGCAATGACTGGACTGTCACAG  550

seq1  AGATCAGGAAGGGGTTGCCTGTCATGCTGTCCTTCCTTGCATCCTTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGGAAGGGGTTGCCTGTCATGCTGTCCTTCCTTGCATCCTTCTCT  600

seq1  GGGTGCGGCTGTATACCTGCTTTATGTGGACTTAAAATTTACAACCCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCGGCTGTATACCTGCTTTATGTGGACTTAAAATTTACAACCCAGA  650

seq1  CAGAGCCTTGTTCTGTGTACTCCCTCAATATAATAAAGCAAAAACAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTTGTTCTGTGTACTCCCTCAATATAATAAAGCAAAAACAAACA  700

seq1  AACACACACAGCACTCACTAGCTTTGGGGGAGTGTCTGCTTCCTCAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACACAGCACTCACTAGCTTTGGGGGAGTGTCTGCTTCCTCAGCAG  750

seq1  AGGGTAGGTCCCCTAAGGGACCAATGGGCATGTCGCTAGGAGAGGAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGGTCCCCTAAGGGACCAATGGGCATGTCGCTAGGAGAGGAAACA  800

seq1  CAACTGGATGTGTCTGTTTACACAACCAACAAACACAGCTAACAGAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGGATGTGTCTGTTTACACAACCAACAAACACAGCTAACAGAATTT  850

seq1  -AAGGCTTTGTCTGAGTACTTTAAAACTTTCCCATTGAAAGAATGAAGAC  899
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTTTGTCTGAGTACTTTAAAACTTTCCCATTGAAAGAATGAAGAC  900

seq1  AAGGACAGAAACCAACACCCCTGACCCCCTGTGATGCTTAGAGACACTTG  949
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AGGACAGAAACCAACACCCCTGACCCCCTGTGATGCTTAGAGACACTTG  949

seq1  CGGTGGGACTGATGGATTCCTACAGTCCCAAGCGTTACCCCAGGGACTTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CGGTGGGACTGATGGATTCCTACAGTCCCAAGCGTTACCCCAGGGAC-TA  998

seq1  GAGCCAATGTGGACTTTTCAGTCCATTTCCTCCTCCAACCTCTGTCCTTT  1049
      ||||| ||||||||||||||||| |||     |||  | |||||||  ||
seq2  GAGCC-ATGTGGACTTTTCAGTCAATT-----CTCTCAACTCTGTC--TT  1040

seq1  GCTCACTTCCTCATCCCGACTGGGATGCCCATGGGTACTTCGTGCCGTCA  1099
      |||||| ||||||| |||||| |||||||||||| ||||||||| |||| 
seq2  GCTCAC-TCCTCAT-CCGACT-GGATGCCCATGGTTACTTCGTG-CGTCT  1086

seq1  AACCCTTTCACAGAAGCAGAGCACAGCTAAAGCTGTGCGGGTGACAGCAG  1149
      |||| |||||||||||||  |  ||||| ||||||||| |||||| ||||
seq2  AACCGTTTCACAGAAGCAAGG--CAGCT-AAGCTGTGC-GGTGAC-GCAG  1131

seq1  GAGATGGCA-AATCAT  1164
      || ||||||  |||||
seq2  GA-ATGGCATCATCAT  1146

seq1: chr2_128208480_128209651
seq2: B6Ng01-269A03.g_66_1219 (reverse)

seq1  TAATTTGTTGGGAATGAAACTTGAGCCAGAATATACATCAGGATAAACCC  50
      ||||||||  |||||||||| ||||||  |||||| |||||||||| || 
seq2  TAATTTGT--GGAATGAAACCTGAGCCGAAATATA-ATCAGGATAATCC-  46

seq1  CCAAAACCCCAAATAGAATTCCTACCCTGTAACCAACAACACCCTGCCTG  100
          ||||    |||||    ||||||||||| |||| ||  ||||||||
seq2  ---GAACC---TATAGA---TCTACCCTGTAA-CAACCACCACCTGCCTG  86

seq1  TCAGAGCCTCATCCCTGGGATGTACAGATACTTCAGGCAGAAGGGACATG  150
      |||||| |||||||   |||||||||||||| ||| |||||| |||||||
seq2  TCAGAG-CTCATCC--TGGATGTACAGATAC-TCA-GCAGAA-GGACATG  130

seq1  GTCCTTCAGGCTCCTCACAGCCCTTC-TCTTTTCCTTTCAGCTGTGG-AG  198
      ||| |  ||||| ||||||||||||| |||||||||||||||||||| ||
seq2  GTCTTCAAGGCT-CTCACAGCCCTTCTTCTTTTCCTTTCAGCTGTGGAAG  179

seq1  GTTGAGGGATACTGACCCAGGACC-TTAACACAAGCAAGGGTTTATGTGC  247
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTTGAGGGATACTGACCCAGGACCTTTAACACAAGCAAGGGTTTATGTGC  229

seq1  AGTGGCTGCGTGGCTTTCAACCGATGTAAGAGAGAGTATTTTACAAAACT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTGCGTGGCTTTCAACCGATGTAAGAGAGAGTATTTTACAAAACT  279

seq1  GTGCTAACTTGTTTCTAAAGATTTTTTATTTTTCAAAAAGTCTCTTCTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAACTTGTTTCTAAAGATTTTTTATTTTTCAAAAAGTCTCTTCTCT  329

seq1  GAACCCAGAGCTTTCCAGCCATTAGCTGTTTTTTGTAAAATCGTGGTATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGAGCTTTCCAGCCATTAGCTGTTTTTTGTAAAATCGTGGTATT  379

seq1  ATTTCAGTGTGTATAATATATACATATGCACATATATCATATACATATAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGTGTGTATAATATATACATATGCACATATATCATATACATATAT  429

seq1  GTGCATGTATGTATATCATATTCTTAAATGATTTTTTACCATAAGTAATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTATGTATATCATATTCTTAAATGATTTTTTACCATAAGTAATT  479

seq1  GAAAGCTTTTAAAGACTATGTTGTTCTGTTATTATTATTATTTATTATTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTTTTAAAGACTATGTTGTTCTGTTATTATTATTATTTATTATTG  529

seq1  TTCTAGGAATCAAATCTGGAATGTATATGAGGCACTGTACCATCGTGTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGAATCAAATCTGGAATGTATATGAGGCACTGTACCATCGTGTCT  579

seq1  ATATTCCCAGCCAGGAGAAAGTTGTCTTGACTCTGATTTAGACATTGCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCCAGCCAGGAGAAAGTTGTCTTGACTCTGATTTAGACATTGCAC  629

seq1  AATGTATGCACATATCACTTGGCACCACACAAGTATGCATGCTTTTAAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGCACATATCACTTGGCACCACACAAGTATGCATGCTTTTAAAA  679

seq1  GTCGTATTTATTCATTAAAATTTTTTAACCAAAAAGTATACACAAATGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTATTTATTCATTAAAATTTTTTAACCAAAAAGTATACACAAATGTA  729

seq1  TTCAATAATAAGAGTGTAAAAATCCAACGTGAAGCTCCACAGTTTCCGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAATAAGAGTGTAAAAATCCAACGTGAAGCTCCACAGTTTCCGTT  779

seq1  CTGGAGAGCTGCTGTTACTGTATGGAAGTCTGTCGAGACATATAGACTCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAGCTGCTGTTACTGTATGGAAGTCTGTCGAGACATATAGACTCT  829

seq1  GGGTCTGGTTAATTTTGATATGTGATATTTTTTTATTTGCAAGCATGTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGGTTAATTTTGATATGTGATATTTTTTTATTTGCAAGCATGTTT  879

seq1  TGTAATAAAGTGCATAACTTTTTCTAAATGATGATGATATATTTTGTAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAAAGTGCATAACTTTTTCTAAATGATGATGATATATTTTGTAAA  929

seq1  TTTTATCTCAATAAAATTATAAAAATTATGGTTTAAAAAAAACTTTCCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTCAATAAAATTATAAAAATTATGGTTTAAAAAAAACTTTCCCT  979

seq1  TATTGGTTGCCCTCCAAACCTAAGAGAACAGCCTGCTCTGCAGGGAAGCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTTGCCCTCCAAACCTAAGAGAACAGCCTGCTCTGCAGGGAAGCT  1029

seq1  AGCAGCTCAGGGACAATGACAGGGACGGATGACCCCTGCTCTGTGCTGAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCTCAGGGACAATGACAGGGACGGATGACCCCTGCTCTGTGCTGAT  1079

seq1  CTTCTGAGTAACAAGCAGTAGCTTTGATTTCTTCTGTGAACTTAGAGGCA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGTAACAAGCAGTAGCTTTGATTTCTTCTGTGAACTTAGAGGCA  1129

seq1  CGCAGACTTCACTTTCTAAGAATTC  1172
      |||||||||||||||||||||||||
seq2  CGCAGACTTCACTTTCTAAGAATTC  1154