BAC Information

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BAC

Clone NameB6Ng01-269O18
Chromosome2 (Build37)
Map Location 35,479,263 - 35,642,964
singlet/doubletdoublet
Overlap geneDab2ip, Ttll11
Upstream geneMapkap1, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik, Ggta1, LOC666042, LOC100042194
Downstream geneNdufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440, Olfr339, Olfr340, Olfr341, Olfr342, Olfr343-ps1, Olfr344, Olfr345, Olfr346, Olfr347, Olfr348
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269O18.bB6Ng01-269O18.g
ACCGA072395GA072396
length1,0761,078
definitionB6Ng01-269O18.b B6Ng01-269O18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,641,908 - 35,642,964)(35,479,263 - 35,480,326)
sequence
gaattcttcctggtaaattacagcttctgctaaaagtttgacacttctat
tttcttcctgtcagggaaaaaacaaataactatataccagtggtcagttc
cgtttccgttttcgtcctttggtaacccatggagcaagccaggcagcacc
ccagccttcctgaggacacaggtgtagccactcggagacggcacgggctt
aatgaagctttgggaattagcagcatacattgacagtgtgacgcaagaga
gcagagcactgtccccagcagaacccaatagagatagccatcttggtgac
aggtgaaacgaaaagcctggcgtccgctgacatgctgtctctgaggctca
ataactgtgtgctgatgtgctttgaagccatggcacttgtgattgaaata
cggagaagggtgtgaattgatggtctgccaactgcagatgggtgggaaga
aggtagggcagggaggggcaagcaagtgtgcagggcaggaaagcaatggc
ctcatccggacaccatgctgggtatcttcacagccaccatggttaaggag
aggacctggatttggagaggggcctctgggtgccaatcatgcttgccaat
caaaacttcacccatccggcacctatgggaactttcacacagggaacaat
gacaaatggcacatcagagaagcactttatcatcagctggggtcatggat
gacatacaccagaactgtccaaagagtattagatacagtctcgacacccc
ggcaactggctcattgtccagtcttcaggattcctaggtagaccctgcct
cccagaacagtcctatcccaggagggggcttcggggaggcagacaggcca
atggatccctaggcgctttttcttttttgacttaggtttcattacctcaa
aggggtgatgaaagccttgttctttgtgggcctgaagagcaagttggaaa
gtgagatgcaattgaggactcaaggagccccatgggacttcttccgttac
aggcaatcacacacattctttcagtagccgggggacaaggtatcggcttt
cattctagaagaccaaggaaaacaaa
gaattctagttggggaaattaaggaaggtttcagagaggagctgacgttg
attgagaatgtgtctgctaagctgctgggatttgctttgctgggagtgac
ctactcggccctaggtccaagtcctacttcgagaaaactgtctttctgcc
agctgtctctctgagcttcagaaatagtggcagtggcaacagggtcctgc
ctgggaagctagaagcctgtgcccgcagctcagacaagttaggtgtgaac
tgttgtcctttacccggcaggcaggaagggacagcctgtacgtatgccag
agaaggaaaaggaaaaagcccttggtgtagttcatcctgtatgggagcag
aggacagcagtcctgtagagcgagttcatcctgcatggaggacagagaca
gcagtgtggacctgagaaggggccttcagtcgtgaccagttgtgggtgtg
ggcagagttgcgggtcagcgtgcagggggccaggggctccttgtccttct
tccactgacccaggggcaggttggatcagggtgtgcctccttttaggaag
ccaccctgaagtattgaaccattcccttctgatcttggtgttagttttgg
catggctaggggttggtcccctaatggaagccttacctacagggctggtg
gcagccccccagctccatctgtgccccacctcatttttgtcctcagcaag
gaggggaaaggaacataggctctgagttcagaaacaggagagtgcccgga
ggagttggtagctggttgtggagacccacagatggccaggcaaaggtgtt
agttagctaagctaccgcctcctactgggggagggctcactgccctcgag
agcatcatgttgttcttggcaaggctgtgagggacagacagtgtctccag
catcccagggtttatgcacttgtgcgccactgagaagggtcttctcttcc
ttgggcttttggtaatcccttatctggaaggtgggatgggggttgggcct
ttgccagttgtgtggaaagcagtgaaggcatggagacattctagagcata
ctgtgctgtgtggctctggaccctggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_35641908_35642964
seq2: B6Ng01-269O18.b_47_1122 (reverse)

seq1  TTTGTTT--CCTGGTC-TCTAGAATG-AAGCCGATACCTGTCCCCCCGGC  46
      |||||||  | ||||| ||||||||| ||||||||||||   ||||||||
seq2  TTTGTTTTCCTTGGTCTTCTAGAATGAAAGCCGATACCTTGTCCCCCGGC  50

seq1  TACTGAA--GATGTGTGTGA-TGCCTGGTACGGA--GAGTCCCATGGGGC  91
      |||||||   |||||||||| ||||||  |||||   |||||||||||||
seq2  TACTGAAAGAATGTGTGTGATTGCCTGTAACGGAAGAAGTCCCATGGGGC  100

seq1  TCC-TGAGTCCTC-ATTGCATCTCACTTTCC-ACTTGCTC-TCAGG-CCA  136
      ||| ||||||||| ||||||||||||||||| |||||||| ||||| |||
seq2  TCCTTGAGTCCTCAATTGCATCTCACTTTCCAACTTGCTCTTCAGGCCCA  150

seq1  C-AAGACCAA-GCTTTCATCACCCCTTTGAGGTAATGAAACCTAGGTCAA  184
      | |||| ||| ||||||||||||||||||||||||||||||||| |||||
seq2  CAAAGAACAAGGCTTTCATCACCCCTTTGAGGTAATGAAACCTAAGTCAA  200

seq1  AAA--GAAAAGCGCCTAGGGATCCATTGGCCTGTCTGCCTCCCCGAAGCC  232
      |||   ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAGCGCCTAGGGATCCATTGGCCTGTCTGCCTCCCCGAAGCC  250

seq1  CCCTCCT-GGATAGGACTGTTCTGGGAGGCAGGGTCTACCTAGGAATCCT  281
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTGGGATAGGACTGTTCTGGGAGGCAGGGTCTACCTAGGAATCCT  300

seq1  GAAGACTGGACAATGAGCCAGTTGCCGGGGTGTCGAGACTGTATCTAATA  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTGGACAATGAGCCAGTTGCCGGGGTGTCGAGACTGTATCTAATA  350

seq1  CTCTTTGGACAGTTCTGGTGTATGTCATCCATGACCCCAGCTGATGATAA  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGGACAGTTCTGGTGTATGTCATCCATGACCCCAGCTGATGATAA  400

seq1  AGTGCTTCTCTGATGTGCCATTTGTCATTGTTCCCTGTGTGAAAGTTCCC  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCTCTGATGTGCCATTTGTCATTGTTCCCTGTGTGAAAGTTCCC  450

seq1  ATAGGTGCCGGATGGGTGAAGTTTTGATTGGCAAGCATGATTGGCACCCA  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGCCGGATGGGTGAAGTTTTGATTGGCAAGCATGATTGGCACCCA  500

seq1  GAGGCCCCTCTCCAAATCCAGGTCCTCTCCTTAACCATGGTGGCTGTGAA  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCCCTCTCCAAATCCAGGTCCTCTCCTTAACCATGGTGGCTGTGAA  550

seq1  GATACCCAGCATGGTGTCCGGATGAGGCCATTGCTTTCCTGCCCTGCACA  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCCAGCATGGTGTCCGGATGAGGCCATTGCTTTCCTGCCCTGCACA  600

seq1  CTTGCTTGCCCCTCCCTGCCCTACCTTCTTCCCACCCATCTGCAGTTGGC  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGCCCCTCCCTGCCCTACCTTCTTCCCACCCATCTGCAGTTGGC  650

seq1  AGACCATCAATTCACACCCTTCTCCGTATTTCAATCACAAGTGCCATGGC  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATCAATTCACACCCTTCTCCGTATTTCAATCACAAGTGCCATGGC  700

seq1  TTCAAAGCACATCAGCACACAGTTATTGAGCCTCAGAGACAGCATGTCAG  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGCACATCAGCACACAGTTATTGAGCCTCAGAGACAGCATGTCAG  750

seq1  CGGACGCCAGGCTTTTCGTTTCACCTGTCACCAAGATGGCTATCTCTATT  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACGCCAGGCTTTTCGTTTCACCTGTCACCAAGATGGCTATCTCTATT  800

seq1  GGGTTCTGCTGGGGACAGTGCTCTGCTCTCTTGCGTCACACTGTCAATGT  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTGCTGGGGACAGTGCTCTGCTCTCTTGCGTCACACTGTCAATGT  850

seq1  ATGCTGCTAATTCCCAAAGCTTCATTAAGCCCGTGCCGTCTCCGAGTGGC  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCTAATTCCCAAAGCTTCATTAAGCCCGTGCCGTCTCCGAGTGGC  900

seq1  TACACCTGTGTCCTCAGGAAGGCTGGGGTGCTGCCTGGCTTGCTCCATGG  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTGTGTCCTCAGGAAGGCTGGGGTGCTGCCTGGCTTGCTCCATGG  950

seq1  GTTACCAAAGGACGAAAACGGAAACGGAACTGACCACTGGTATATAGTTA  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCAAAGGACGAAAACGGAAACGGAACTGACCACTGGTATATAGTTA  1000

seq1  TTTGTTTTTTCCCTGACAGGAAGAAAATAGAAGTGTCAAACTTTTAGCAG  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTTCCCTGACAGGAAGAAAATAGAAGTGTCAAACTTTTAGCAG  1050

seq1  AAGCTGTAATTTACCAGGAAGAATTC  1057
      ||||||||||||||||||||||||||
seq2  AAGCTGTAATTTACCAGGAAGAATTC  1076

seq1: chr2_35479263_35480326
seq2: B6Ng01-269O18.g_69_1146

seq1  GAATTCTAGTTGGGGAAATTAAGGAAGGTTTCAGAGAGGAGCTGACGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTGGGGAAATTAAGGAAGGTTTCAGAGAGGAGCTGACGTTG  50

seq1  ATTGAGAATGTGTCTGCTAAGCTGCTGGGATTTGCTTTGCTGGGAGTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAATGTGTCTGCTAAGCTGCTGGGATTTGCTTTGCTGGGAGTGAC  100

seq1  CTACTCGGCCCTAGGTCCAAGTCCTACTTCGAGAAAACTGTCTTTCTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCGGCCCTAGGTCCAAGTCCTACTTCGAGAAAACTGTCTTTCTGCC  150

seq1  AGCTGTCTCTCTGAGCTTCAGAAATAGTGGCAGTGGCAACAGGGTCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTCTCTGAGCTTCAGAAATAGTGGCAGTGGCAACAGGGTCCTGC  200

seq1  CTGGGAAGCTAGAAGCCTGTGCCCGCAGCTCAGACAAGTTAGGTGTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGCTAGAAGCCTGTGCCCGCAGCTCAGACAAGTTAGGTGTGAAC  250

seq1  TGTTGTCCTTTACCCGGCAGGCAGGAAGGGACAGCCTGTACGTATGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCCTTTACCCGGCAGGCAGGAAGGGACAGCCTGTACGTATGCCAG  300

seq1  AGAAGGAAAAGGAAAAAGCCCTTGGTGTAGTTCATCCTGTATGGGAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAAAGGAAAAAGCCCTTGGTGTAGTTCATCCTGTATGGGAGCAG  350

seq1  AGGACAGCAGTCCTGTAGAGCGAGTTCATCCTGCATGGAGGACAGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCAGTCCTGTAGAGCGAGTTCATCCTGCATGGAGGACAGAGACA  400

seq1  GCAGTGTGGACCTGAGAAGGGGCCTTCAGTCGTGACCAGTTGTGGGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTGGACCTGAGAAGGGGCCTTCAGTCGTGACCAGTTGTGGGTGTG  450

seq1  GGCAGAGTTGCGGGTCAGCGTGCAGGGGGCCAGGGGCTCCTTGTCCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGTTGCGGGTCAGCGTGCAGGGGGCCAGGGGCTCCTTGTCCTTCT  500

seq1  TCCACTGACCCAGGGGCAGGTTGGATCAGGGTGTGCCTCCTTTTAGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGACCCAGGGGCAGGTTGGATCAGGGTGTGCCTCCTTTTAGGAAG  550

seq1  CCACCCTGAAGTATTGAACCATTCCCTTCTGATCTTGGTGTTAGTTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGAAGTATTGAACCATTCCCTTCTGATCTTGGTGTTAGTTTTGG  600

seq1  CATGGCTAGGGGTTGGTCCCCTAATGGAAGCCTTACCTACAGGGCTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTAGGGGTTGGTCCCCTAATGGAAGCCTTACCTACAGGGCTGGTG  650

seq1  GCAGCCCCCCAGCTCCATCTGTGCCCCACCTCATTTTTGTCCTCAGCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCCCCCAGCTCCATCTGTGCCCCACCTCATTTTTGTCCTCAGCAAG  700

seq1  GAGGGGAAAGGAACATAGGCTCTGAGTTCAGAAACAGGAGAGTGCCCGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAAAGGAACATAGGCTCTGAGTTCAGAAACAGGAGAGTGCCCGGA  750

seq1  GGAGTTGGTAGCTGGTTGTGGAGACCCACAGATGGCCAGGCAAAGGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGGTAGCTGGTTGTGGAGACCCACAGATGGCCAGGCAAAGGTGTT  800

seq1  AGTTAGCTAAGCTACCGCCTCCTACTGGGGGAGGGCTCACTGCCCTCGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGCTAAGCTACCGCCTCCTACTGGGGGAGGGCTCACTGCCCTCGAG  850

seq1  AGCATCATGTTGTTCTTGGCAAGGCTGTGAGGGACAGACAGTGTCTCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATGTTGTTCTTGGCAAGGCTGTGAGGGACAGACAGTGTCTCCAG  900

seq1  CATCCCAGGG-TTATGCAC-TGTGCGCCACTGAGAAGGGTCTTCTCTT-C  947
      |||||||||| |||||||| |||||||||||||||||||||||||||| |
seq2  CATCCCAGGGTTTATGCACTTGTGCGCCACTGAGAAGGGTCTTCTCTTCC  950

seq1  TTGG--CTTTGGTA--TCCTTATCT-GAAGGTTGGATGGGG--TGGGCCT  990
      ||||   |||||||   |||||||| |||||| ||||||||  |||||||
seq2  TTGGGCTTTTGGTAATCCCTTATCTGGAAGGTGGGATGGGGGTTGGGCCT  1000

seq1  T--GCAGTTGTGTGG-AAGCAGTG-AGGGATGGAGACATCTAAGAGTCAT  1036
      |   ||||||||||| |||||||| ||| ||||||||||   |||| |||
seq2  TTGCCAGTTGTGTGGAAAGCAGTGAAGGCATGGAGACATTCTAGAG-CAT  1049

seq1  ACTGTGCTGTGTGGTTCT-GAGCCTGGCT  1064
      |||||||||||||| ||| || |||||||
seq2  ACTGTGCTGTGTGGCTCTGGACCCTGGCT  1078