BAC Information

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BAC

Clone NameB6Ng01-270B12
Chromosome2 (Build37)
Map Location 139,376,020 - 139,377,167
singlet/doubletsinglet
Overlap geneC130053K05Rik
Upstream geneLOC628103
Downstream geneLOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270B12.bB6Ng01-270B12.g
ACCGA072525GA072526
length1,2021,140
definitionB6Ng01-270B12.b B6Ng01-270B12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttaatgtggttatttgattt
tctggagtccaccttcttgaactctttatatatattggatattattcccc
tatctgatttaggataggtaaagatcctttccaaatgtgttggtggcctt
tttgtcatattgacggtgtcttttgccttgcagaagtttgcattttcatg
agatcccatttgtcaattctcaatcttacagcacaagctattgatgttct
attcaggaatttttcccctgtgcccatatcttagaggcttttccccactt
tctcctctataagtttcagtgtctctggttttatgtggagttccttgatc
cacttagatttgaccttagtacaaggagataggaatggatcaattcgaat
tcctctacatgataaccaccagttttgccagcaccatttgttaaaaatgc
tgtctttcttccactggatggttttagctcccttgtcaaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattggtc
tacttgtctgtcactataccagtaccaggcagttgttatcacaattgctc
tgtagtcaagctttaggtcaggcatggtgatttcaccagaggttctttta
tccttgagaagattttttgctatcctaggtttttttgttattccagatga
atttgcagattgctctttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagttcttatcatac
agatctttcacttcctttatttgaatcacgcccagatattttatattatt
gtgactattgagaaaggtgttgtttccctaattctttctcagctgtttgt
cctttgtgttagagaaaggcaatgacttgtttgactattttattatcagc
tacttcactgaagctgtttaatcaggttagagtctctgttgaactttgaa
gtcacttaatgtactatatcatatcatctcgcaaaaaggtaatacttgga
cttcatcttttccaagttgtaatccctcttggaactcctccccattagtc
tg
gaattccatgcattttcttagatttgaacttgtgatttgattaagagcat
tgggtgatactacagcatcacatagggcattggggttatgtacaaatgat
gcacttctactgtaatccagtcatcacctttgtgtgtacaggggaagaaa
gatgagaaaatatacattttggtagaattaatgtgaggaatgaagagaaa
tgcttctccgtggtttctccaaaattaacttttcctgggtttgaagacat
gggaacagcatgtgtcaggatatgttcaaagattgaaactaactcacttc
actgatttttggggtgtttcttagctacttgccattttctacttatagat
attatctgccaggcatatgtgttcatgctgaacaaagtaaaagatcactg
tactttgagaaagtcattcatgctatctagtttctggtagctctcacagt
atggggaactctttttaggaggcagatctgttgttaaccaattttcacca
tttaacgtttttcttaagattatgaagcatgttttctaatccagttactt
gaaattatttcagatgaatggcttccagaataatgatattactttttatg
ttgcaggatgctttcaaataaaccatcttagttatttattccatcactga
tggtctaggttcatgtttcatcctggttttttttttttatgactagtgta
ggtagcttatctttgggtctttcgttatttacatgaagcctgttaacatc
catgtcttggaacttgactcagaaaaatgaatgtaaaaatttcagggtat
gaatagatagtaaaagaataccaaaaaactcacccctgtttaatttctct
gggttttctgacatgtacaactaggaatatgtctttatgtggttttctct
ggtggtaaatcattgtctctgtccatctgccttcttaattcggcttctgt
ctatgatgaacgatgagttgaaatgttatttatttttgagactgtcttct
gatttgattattcacagtactagtactgttatcactagctctagaagtac
atccaagaagtcactactctgtgctttttttagctgggttattttctcag
tgttgctaaacatcagaatgaacatgtgagttctcctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139376020_139377167
seq2: B6Ng01-270B12.g_67_1206 (reverse)

seq1  GACAGGAGACATCCACAATGTTTCATCTGATGTTTAAGCAAACACTGGAG  50
      ||||||||| |  ||| |||||   |||||||||| ||| |||||| |||
seq2  GACAGGAGA-ACTCAC-ATGTTCATTCTGATGTTT-AGC-AACACT-GAG  45

seq1  AAATAACCCCAGCTATAAAAAGCACAGAGTTAGTGACTTCTTGGGATGTT  100
      |||  | |||||||| ||||||||||||| |||||||||||| ||||| |
seq2  AAAATAACCCAGCTAAAAAAAGCACAGAG-TAGTGACTTCTT-GGATG-T  92

seq1  ACTTCTAGAGCTAGTGATACCAGTACTAGTACTGTGAATAATCAAATCAG  150
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACTTCTAGAGCTAGTGATAACAGTACTAGTACTGTGAATAATCAAATCAG  142

seq1  AAGACAGTCTCAAAAATAAATAACATTTCAACTCATCGTTCATCATAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTCTCAAAAATAAATAACATTTCAACTCATCGTTCATCATAGAC  192

seq1  AGAAGCCGAATTAAGAAGGCAGATGGACAGAGACAATGATTTACCACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCGAATTAAGAAGGCAGATGGACAGAGACAATGATTTACCACCAG  242

seq1  AGAAAACCACATAAAGACATATTCCTAGTTGTACATGTCAGAAAACCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACCACATAAAGACATATTCCTAGTTGTACATGTCAGAAAACCCAG  292

seq1  AGAAATTAAACAGGGGTGAGTTTTTTGGTATTCTTTTACTATCTATTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAAACAGGGGTGAGTTTTTTGGTATTCTTTTACTATCTATTCAT  342

seq1  ACCCTGAAATTTTTACATTCATTTTTCTGAGTCAAGTTCCAAGACATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGAAATTTTTACATTCATTTTTCTGAGTCAAGTTCCAAGACATGGA  392

seq1  TGTTAACAGGCTTCATGTAAATAACGAAAGACCCAAAGATAAGCTACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACAGGCTTCATGTAAATAACGAAAGACCCAAAGATAAGCTACCTA  442

seq1  CACTAGTCATAAAAAAAAAAAACCAGGATGAAACATGAACCTAGACCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGTCATAAAAAAAAAAAACCAGGATGAAACATGAACCTAGACCATC  492

seq1  AGTGATGGAATAAATAACTAAGATGGTTTATTTGAAAGCATCCTGCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGGAATAAATAACTAAGATGGTTTATTTGAAAGCATCCTGCAACA  542

seq1  TAAAAAGTAATATCATTATTCTGGAAGCCATTCATCTGAAATAATTTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGTAATATCATTATTCTGGAAGCCATTCATCTGAAATAATTTCAA  592

seq1  GTAACTGGATTAGAAAACATGCTTCATAATCTTAAGAAAAACGTTAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTGGATTAGAAAACATGCTTCATAATCTTAAGAAAAACGTTAAATG  642

seq1  GTGAAAATTGGTTAACAACAGATCTGCCTCCTAAAAAGAGTTCCCCATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAATTGGTTAACAACAGATCTGCCTCCTAAAAAGAGTTCCCCATAC  692

seq1  TGTGAGAGCTACCAGAAACTAGATAGCATGAATGACTTTCTCAAAGTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAGCTACCAGAAACTAGATAGCATGAATGACTTTCTCAAAGTACA  742

seq1  GTGATCTTTTACTTTGTTCAGCATGAACACATATGCCTGGCAGATAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTTTTACTTTGTTCAGCATGAACACATATGCCTGGCAGATAATAT  792

seq1  CTATAAGTAGAAAATGGCAAGTAGCTAAGAAACACCCCAAAAATCAGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGTAGAAAATGGCAAGTAGCTAAGAAACACCCCAAAAATCAGTGA  842

seq1  AGTGAGTTAGTTTCAATCTTTGAACATATCCTGACACATGCTGTTCCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTAGTTTCAATCTTTGAACATATCCTGACACATGCTGTTCCCAT  892

seq1  GTCTTCAAACCCAGGAAAAGTTAATTTTGGAGAAACCACGGAGAAGCATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAAACCCAGGAAAAGTTAATTTTGGAGAAACCACGGAGAAGCATT  942

seq1  TCTCTTCATTCCTCACATTAATTCTACCAAAATGTATATTTTCTCATCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCATTCCTCACATTAATTCTACCAAAATGTATATTTTCTCATCTT  992

seq1  TCTTCCCCTGTACACACAAAGGTGATGACTGGATTACAGTAGAAGTGCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCCTGTACACACAAAGGTGATGACTGGATTACAGTAGAAGTGCAT  1042

seq1  CATTTGTACATAACCCCAATGCCCTATGTGATGCTGTAGTATCACCCAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTACATAACCCCAATGCCCTATGTGATGCTGTAGTATCACCCAAT  1092

seq1  GCTCTTAATCAAATCACAAGTTCAAATCTAAGAAAATGCATGGAATTC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAATCAAATCACAAGTTCAAATCTAAGAAAATGCATGGAATTC  1140