BAC Information

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BAC

Clone NameB6Ng01-270C20
Chromosome2 (Build37)
Map Location 45,301,542 - 45,302,136
singlet/doubletsinglet
Overlap genenone
Upstream geneGtdc1, Zeb2
Downstream geneLOC100042661, LOC100041337, LOC666604, LOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270C20.bB6Ng01-270C20.g
ACCGA072586GA072587
length5881,166
definitionB6Ng01-270C20.b B6Ng01-270C20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
acaatcctaaggtatcaaatgaagttgtgaaatcttccaatttcttatcg
tttggctatttttagtgtaaaattaaactgttctgtgtattactaatttg
gaactaagactgctcaatctcaacacagcacaaacatccaagagattatt
ttatggaataatttctcattctgtctctgactctgtctctgtctctgtct
ctgtctctgtctctgtctctgtctctgtctctctgtgtgtgtgtgtgtgt
gtgtgtgtgtgtatgtttgtctttctgtctctgtctctctctgtgtgtct
gtctgtctctgtctctgtctctctctctctctgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtttgtgtgtgtgtctttctctcactagattggc
ctgtttggaaggttttgtagacactaggtaccacacaagaactgaatcac
agttgctaaggtgctcagatctgatgcttatcatcctccagcctcatgct
ttaatagctgccctatccgaatacacctccagcaaaatcttgttggcata
tgctatagctgtctcatgtgagactatacctgtgcctg

gaattctttgtttagctctgtaccccatttttaatagagttatttggttt
tctggggtctagcttcttgagttctttgtatatattggatattatccctc
tatcacatttacgactggtaaagatcttttcccaatctgttggctaccct
tttgtcttattgacagcatcctttgccttacagatgctttgtaattttat
gaggtcctatttgtcaatttttgatattacagcacaagccattggtgttc
tgttcaggaatttttcccctgtgcccatatctccaagactcttccctact
ttctcctctatgagtttcaatgtctctggttttatgtggagttccttgat
ccacttagatttgagctttctacaaggacagaagaatttgaaattcttag
acaaatggatagatctggaggatatcaccttaagtgaggtaacccaatta
caaaagaacatacatgaaatgcactcactgataagtgaatattagtccag
aatgtcagaatatccatgatacaatttgcaaaacacatgaaactcaaaaa
ggaagaccaaagtgtggatactttgatccttcttagaaggggaaacaaaa
tacccatgaaaggagttacagagacaaagttcagagcagagattggagga
atgaccatacagaaactgcactacctggggatccaccccataaaaaacca
ccaaacccagacactattgcagatgccaacaaaatcttgctgacagaagc
ctgataaagctgtctcctgagaggctctgccagtgcctgacaaataagta
gtggatgctcccagccatccattggactgagcacagggtccccaatgaag
gagctagagaaagtacccaaaggagctgaaggggtttgcagccccatagg
aggaacaacaatatgaactaaccagtatcttcacagctcccagggactaa
tcaccaaccaaagagtacatacacatggtgggactcatggcttcagttgc
atatgtagcagagacgctagtcagtcatcaacggagagagccttgtctgt
gaaggcttctatgccccaaagtagtggaataccaggtcagcaagcaagat
tgagtgggtgataacagtgagaataggaaggagctgggctttctacggta
ctacattagatggtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_45301542_45302136
seq2: B6Ng01-270C20.b_43_636 (reverse)

seq1  CAGGCACTGGTATAGTCTCACATGAGACAGCTATTGCATATGCCAGCAAG  50
      ||||||| |||||||||||||||||||||||||| |||||||||| ||||
seq2  CAGGCACAGGTATAGTCTCACATGAGACAGCTATAGCATATGCCAACAAG  50

seq1  ATTTTGCTGGAGGTGTATTCCTATAAGGCAGCTATTAAAGCATTGAGGCT  100
      ||||||||||||||||||||  ||| |||||||||||||||| |||||||
seq2  ATTTTGCTGGAGGTGTATTCGGATAGGGCAGCTATTAAAGCA-TGAGGCT  99

seq1  GGAGGATGACAAGCATCAGCTCTGAGCACCTTAGCAACTGTGATTCAGTT  150
      ||||||||| ||||||||| ||||||||||||||||||||||||||||||
seq2  GGAGGATGATAAGCATCAGATCTGAGCACCTTAGCAACTGTGATTCAGTT  149

seq1  CTTGTGTGGTACCTAGTGTCTACAAAACCTTCCAAACAGGCCAATCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTGTGTGGTACCTAGTGTCTACAAAACCTTCCAAACAGGCCAATCTAGT  199

seq1  GAGAGAAAGACACACACACAAACACACACACACACACACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAGACACACACACAAACACACACACACACACACACACACACACA  249

seq1  CACACACAGAGAGAGAGAGAGACAGAGACAGAGACAGACAGACACACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACAGAGAGAGAGAGAGACAGAGACAGAGACAGACAGACACACAGA  299

seq1  GAGAGACAGAGACAGAAAGACAAACATACACACACACACACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACAGAGACAGAAAGACAAACATACACACACACACACACACACACA  349

seq1  CACACAGAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACAGAGACA  399

seq1  GAGACAGAGTCAGAGACAGAATGAGAAATTATTCCATAAAATAATCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGTCAGAGACAGAATGAGAAATTATTCCATAAAATAATCTCTT  449

seq1  GGATGTTTGTGCTGTGTTGAGATTGAGCAGTCTTAGTTCCAAATTAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTTTGTGCTGTGTTGAGATTGAGCAGTCTTAGTTCCAAATTAGTAA  499

seq1  TACACAGAACAGTTTAATTTTACACTAAAAATAGCCAAACGATAAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAACAGTTTAATTTTACACTAAAAATAGCCAAACGATAAGAAAT  549

seq1  TGGAAGATTTCACAACTTCATTTGATACCTTAGGATTGTGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGATTTCACAACTTCATTTGATACCTTAGGATTGTGAATTC  594


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