BAC Information

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BAC

Clone NameB6Ng01-271B10
Chromosome2 (Build37)
Map Location 129,370,269 - 129,370,997
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383791, LOC100043730, Gm355, Anapc1, Mertk, Tmem87b, 1600015H20Rik, Zc3h8, LOC100043735, LOC100043736, Zc3h6, LOC668894, Ttl, LOC100043738, Rpo1-2, Chchd5, LOC545461, LOC100043431, Slc20a1, A730036I17Rik, LOC671466, Ckap2l, Il1a, Il1b, OTTMUSG00000015529, LOC668896, F830045P16Rik
Downstream geneSirpa, Pdyn, Ppia-ps2_1620.1, Stk35, Tgm3, AU015228, LOC100043438, Tgm6, Snrpb, Tmc2, Nol5a, Idh3b, Ebf4, LOC668899, Cpxm1, LOC100043446, 1700020A23Rik, 4933425O20Rik, A930025D01Rik, Vps16, Ptpra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271B10.bB6Ng01-271B10.g
ACCGA073263GA073264
length1,237735
definitionB6Ng01-271B10.b B6Ng01-271B10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaattcattgttattaatagctgagtagtactccgttgtgt
aaatgtaccacattttctgtatccattcctctgttgagggacatctgggt
tctttccagcttctgggtattataaataagactgctatgaacatagtgga
gcttgtgtccttattaccagttggaacttcttctggatatatgcccagga
gaggtattgctggatgttcacttttctgaggaaccgccagactgacttcc
agagtgggtgtacaagcttgcaatcccaccagcaatggaggagtgttcct
ctttctccacatcctcgccagcatctgttgtcacctgaatttttgatctt
agccattctgactgatgtgaggtagaatctcaaggttgttttgatttgca
tttccctgatgattaaggatgttgaacattttttcaggtgcttctcagcc
cttcagtattcctcagttgagaattctttgtttagctctgtaccccattt
tttaatggggttatttgaatttctggagcccagcttcttgagctctttgt
atatattggatattagtcccctatcagatttaggattgataaagattctt
tcccaatcttttggtggcccttttgtcttattgacagtgtcttttgcctt
atagaagctttgcaattttatgaggtcccatttgtcaattcttgatctta
cagcacaagccattgctgttctgtttagaaatttgtcccctgtgcccata
tctttgaggcttttccccactctctcctctataaatttcagtgtctctgg
ttttatgtggaggtctttgatgcacttagacaaggagataggaatggatc
aattcgcattcttctacatgataaccaccagttgtgccagcaccatttgt
tgaaaatgttgtctttttttccattggatggttttagctcccttggtcaa
gatcaagtgaccataggtggtgtggattcatttctgggttcttcaagttc
tatttccattgatctacctgtcctgtgctgtaccaggtaccattgccagg
tttttattacatttgctcttgtagttactgcttggaggttcaggcatttc
caccagagggttcttttattggttggagaatagttttggcctatccttaa
ggttttttttttatattccggaaatgaaatgtgccaaatggtccctatct
ctctactacgtcgttggacatatgtagagcagtctga
gaattcacaccacagcttggccagctggactctgacctgatcagccaagc
agctaaataggcaggcaggaaaagagaggctcagcttggggtctaggcca
cctccagctttggtcataggaattcctttcgcattcctcctgcatctcag
ctggaagggggtatcccagagaaatgttgggtctgtgccaccgctgtgtc
acagctgtctctcttgtgacagctgccacttacggagtgagctgttttat
attgactctccgtctagcttgcagtctttgtgtggacttcctgagagggg
ttctttctcctccctttagaaatgagcaaagacacagaaaggcaagttgc
ttatgtaagtcatacagctggtgagtggaaagaccagaacttaaccatgt
catatgctaagcgagtaggcccaatgaatgggagacttaaatgagattag
aggtggtataaggaggacaagaaggcagaacaccatggggactggtgtgg
tatcctcctggcaaaggctgggaccagcttggtaccctgctggagaggct
ctggggagaggaagggagtggcagatggggccaggtggcaagggttggaa
ggcaatggaggtgcttgaatttgagccacagggaggtgccatgggggatg
agccaccctggatcctttgggtgtggataaatttggtgagccgaatgcgg
gtctgcagggacagataatagttggaaagaagccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_129370269_129370997
seq2: B6Ng01-271B10.g_65_799

seq1  GAATTCACACCACAGCTTGGCCAGCTGGACTCTGACCTGATCAGCCAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACCACAGCTTGGCCAGCTGGACTCTGACCTGATCAGCCAAGC  50

seq1  AGCTAAATAGGCAGGCAGGAAAAGAGAGGCTCAGCTTGGGGTCTAGGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAATAGGCAGGCAGGAAAAGAGAGGCTCAGCTTGGGGTCTAGGCCA  100

seq1  CCTCCAGCTTTGGTCATAGGAATTCCTTTCGCATTCCTCCTGCATCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCTTTGGTCATAGGAATTCCTTTCGCATTCCTCCTGCATCTCAG  150

seq1  CTGGAAGGGGGTATCCCAGAGAAATGTTGGGTCTGTGCCACCGCTGTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGGGGGTATCCCAGAGAAATGTTGGGTCTGTGCCACCGCTGTGTC  200

seq1  ACAGCTGTCTCTCTTGTGACAGCTGCCACTTACGGAGTGAGCTGTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTCTCTCTTGTGACAGCTGCCACTTACGGAGTGAGCTGTTTTAT  250

seq1  ATTGACTCTCCGTCTAGCTTGCAGTCTTTGTGTGGACTTCCTGAGAGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACTCTCCGTCTAGCTTGCAGTCTTTGTGTGGACTTCCTGAGAGGGG  300

seq1  TTCTTTCTCCTCCCTTTAGAAATGAGCAAAGACACAGAAAGGCAAGTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTCCTCCCTTTAGAAATGAGCAAAGACACAGAAAGGCAAGTTGC  350

seq1  TTATGTAAGTCATACAGCTGGTGAGTGGAAAGACCAGAACTTAACCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAAGTCATACAGCTGGTGAGTGGAAAGACCAGAACTTAACCATGT  400

seq1  CATATGCTAAGCGAGTAGGCCCAATGAATGGGAGACTTAAATGAGATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCTAAGCGAGTAGGCCCAATGAATGGGAGACTTAAATGAGATTAG  450

seq1  AGGTGGTATAAGGAGGACAAGAAGGCAGAACACCATGGGGACTGGTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTATAAGGAGGACAAGAAGGCAGAACACCATGGGGACTGGTGTGG  500

seq1  TATCCTCCTGGCAAAGGCTGGGACCAGCTTGGTACCCTGCTGGAGAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCCTGGCAAAGGCTGGGACCAGCTTGGTACCCTGCTGGAGAGGCT  550

seq1  CTGGGGAGAGGAAGGGAGTGGCAGATGGGGCCAGGTGGCAAGGGTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAGAGGAAGGGAGTGGCAGATGGGGCCAGGTGGCAAGGGTTGGAA  600

seq1  GGCAATGGAGGTGCTTGAATTTGAGCCACAGGGAGGTGCCAT-GGGGATG  649
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGCAATGGAGGTGCTTGAATTTGAGCCACAGGGAGGTGCCATGGGGGATG  650

seq1  AGCCA-CCTGGATCCTTT-GGTGTGGATAAA-TTGGTGAGCCGAATGCGG  696
      ||||| |||||||||||| |||||||||||| ||||||||||||||||||
seq2  AGCCACCCTGGATCCTTTGGGTGTGGATAAATTTGGTGAGCCGAATGCGG  700

seq1  GTCTGCA-GGACAGAAAATAGCTGGAAAG-AGCCC  729
      ||||||| ||||||| ||||| ||||||| |||||
seq2  GTCTGCAGGGACAGATAATAGTTGGAAAGAAGCCC  735