MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-271J03
Chromosome	2 (Build37)
Map Location	66,316,653 - 66,436,581
singlet/doublet	doublet
Overlap gene	Scn9a
Upstream gene	Scn3a, Scn2a1, A330102K23Rik, Galnt3, LOC620893, Ttc21b, Scn1a, LOC100039486, LOC383706
Downstream gene	Scn7a, LOC383707, LOC100039540, Gm1322, Cmya3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Scn3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20269 MGI:98249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scn2a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 22 Proteins

name	A330102K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77771 MGI:1925021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Galnt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14425 MGI:894695
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620893 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	Ttc21b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73668 MGI:1920918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scn1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20265 MGI:98246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC383706 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383706
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Scn9a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20274 MGI:107636
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scn7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20272 MGI:102965
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383707 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 27 Proteins pseudo : _no_value

name	LOC100039540 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039540
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Gm1322 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383709 MGI:2686168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cmya3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241431 MGI:2685198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Scn3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125630312 GeneID:20269 MGI:98249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type III, alpha transcript_id : NM_018732.2

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249801 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 15 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 1 transcript_id : XM_001472855.1

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249807 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 12 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 4 transcript_id : XM_001472911.1

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249805 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 12 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 3 transcript_id : XM_001472890.1

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249803 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 16 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 2 transcript_id : XM_001472870.1

name	Scn2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249809 GeneID:110876 MGI:98248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 48 ESTs, 13 Proteins product : sodium channel, voltage-gated, type II, alpha 1, transcript variant 5 transcript_id : XM_001472929.1

name	A330102K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802326 GeneID:77771 MGI:1925021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A330102K23 gene transcript_id : NM_153409.3

name	Galnt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7657109 GeneID:14425 MGI:894695
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 transcript_id : NM_015736.1

name	LOC620893 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94367005 GeneID:620893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : hypothetical protein LOC620893 transcript_id : XM_885274.2

name	Ttc21b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158710 GeneID:73668 MGI:1920918
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 21B transcript_id : NM_001047604.1

name	Scn1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125630314 GeneID:20265 MGI:98246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type I, alpha transcript_id : NM_018733.2

name	LOC100039486 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249811 GeneID:100039486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to keratin associated protein 6-2 transcript_id : XM_001472967.1

name	Scn9a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125630308 GeneID:20274 MGI:107636
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type IX, alpha transcript_id : NM_018852.2

name	Scn7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33469088 GeneID:20272 MGI:102965
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sodium channel, voltage-gated, type VII, alpha transcript_id : NM_009135.1

name	Gm1322 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381807 GeneID:383709 MGI:2686168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1322, (NCBI) transcript_id : NM_001033477.2

name	Cmya3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377342 GeneID:241431 MGI:2685198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cardiomyopathy associated 3 transcript_id : NM_001024618.2

name	Cmya3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:145046245 GeneID:241431 MGI:2685198
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cardiomyopathy associated 3 transcript_id : NM_001083919.1

name	Scn3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125630313 GeneID:20269 MGI:98249
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO:0001518 - voltage-gated sodium channel complex [Evidence IEA] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005249 - voltage-gated potassium channel activity [Evidence IEA]; GO:0005248 - voltage-gated sodium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium channel, voltage-gated, type III, alpha polypeptide product : sodium channel, voltage-gated, type III, alpha protein_id : NP_061202.2

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249802 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 1 protein_id : XP_001472905.1

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249808 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 4 protein_id : XP_001472961.1

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249806 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 3 protein_id : XP_001472940.1

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249804 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 2 protein_id : XP_001472920.1

name	Scn2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249810 GeneID:110876 MGI:98248
definition	codon_start : 1 product : sodium channel, voltage-gated, type II, alpha 1 isoform 5 protein_id : XP_001472979.1

name	A330102K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31712028 CCDS:CCDS16074.1 GeneID:77771 MGI:1925021
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 product : TGF-beta induced apoptosis protein 2 protein_id : NP_700458.2

name	Galnt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657110 CCDS:CCDS16075.1 GeneID:14425 MGI:894695
definition	EC_number : 2.4.1.41 GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004653 - polypeptide N-acetylgalactosaminyltransferase activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation function : glycosyl transferase note : ppGaNTase-T3 product : UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 protein_id : NP_056551.1

name	LOC620893 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94367006 GeneID:620893
definition	codon_start : 1 product : similar to LOC620893 protein protein_id : XP_890367.2

name	Ttc21b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114158711 CCDS:CCDS16076.1 GeneID:73668 MGI:1920918
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : tetratricopeptide repeat-containing hedgehog modulator 1 product : tetratricopeptide repeat domain 21B protein_id : NP_001041069.1

name	Scn1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125630315 GeneID:20265 MGI:98246
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0008076 - voltage-gated potassium channel complex [Evidence IEA]; GO:0001518 - voltage-gated sodium channel complex [Evidence IEA] GO_function : GO:0005249 - voltage-gated potassium channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium channel voltage-gated type I alpha product : sodium channel, voltage-gated, type I, alpha protein_id : NP_061203.2

name	LOC100039486 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249812 GeneID:100039486
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473017.1

name	Scn9a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125630309 GeneID:20274 MGI:107636
definition	GO_component : GO:0001518 - voltage-gated sodium channel complex [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005272 - sodium channel activity [Evidence IEA]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA]; GO:0005248 - voltage-gated sodium channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : sodium channel 25; voltage-gated sodium channel alpha subunit Nav1.7; sodium channel, voltage-gated, type IX, alpha polypeptide product : sodium channel, voltage-gated, type IX, alpha protein_id : NP_061340.2

name	Scn7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33469089 CCDS:CCDS16081.1 GeneID:20272 MGI:102965
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : sodium channel, voltage-gated, type VI, alpha polypeptide product : sodium channel, voltage-gated, type VII, alpha polypeptide protein_id : NP_033161.1

name	Gm1322 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702009 GeneID:383709 MGI:2686168
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC383709 protein_id : NP_001028649.1

name	Cmya3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66841385 CCDS:CCDS16082.1 GeneID:241431 MGI:2685198
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; xin-beta product : cardiomyopathy associated 3 isoform 1 protein_id : NP_001019789.1

name	Cmya3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:145046246 GeneID:241431 MGI:2685198
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; xin-beta product : cardiomyopathy associated 3 isoform 2 protein_id : NP_001077388.1

name	LOC383706 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383706
definition	number : 1 pseudo : _no_value

name	LOC383707 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383707
definition	number : 1 pseudo : _no_value

name	LOC383707 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383707
definition	number : 2 pseudo : _no_value

name	LOC100039540 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039540
definition	number : 1 pseudo : _no_value

name	LOC100039540 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039540
definition	number : 2 pseudo : _no_value

clone name	MSMg01-357A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545L03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-308B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271K15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-478E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464P01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-401N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327F05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-400M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-088D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087P14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-271J03.b	B6Ng01-271J03.g
ACC	GA073614	GA073615
length	1,197	1,168
definition	B6Ng01-271J03.b	B6Ng01-271J03.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(66,435,387 - 66,436,581)	(66,316,653 - 66,317,821)
sequence	gaattccttagcatcccaagaagtcatccagacagcaaaacatagcccca gggacatgaactatactttcagagcatctgagagtctacaccacagtgaa agcttactcaactgatgcagagccaatgcttgaacatctgagagcccaac tgtactctacacccccgcccccagacaggagaacacccaggaacaccata tatagatcattttatttcacacaggttatctaactttattttgatttatt atgttaagatgtcttgttgttgtcatttgtattttgatgtgtgtggtgct caagataaaacccatggccttgtgtgtgttaggcaagtattctgctactg agctgtctccagcctattaaaagtgatttttacactaataattaactttc ttctttgcaatggtaagctttatgataaagagatttattgatcagggact aacttagataaaataaactcaatattttattgctaagaaatgtgtgtttt tcaatctagaagtttttgtgtgagaattaacagatttatagaccgtctca ttaatcttcttcaatcgattgcacttaggagcaggtacatatgacaattt aagcacataaaaatgggttacactttaacatagttctcaagcaatatgtt tttgcatatttaaaaattaaagtgaggaagatccaagttaaagatcatgc cacagtcactggaaggctgttacacagataatgagtcttttctgtgccac gtttgaggtctgagggtttgtgattacttgactgtgcccctaaggaagtt aaaaacaacttgcctgtcatgttaaatttgatttttaaagaacagttggc cagaaatttgccttaaacacacggacaaagtgtggcttctagattcttga tgggcaggcattattcgattacatttcttgggattgttttatttaattac aagaacagctcaccaacaagctagtcactgattgaatttctaagctcagt ctgctgcgtaaaccaatgactcatcaggaaaacttcttcagtgactcaca tgccaggaccttcatggcaaataaattattccggaggcatgacctctccg tactgtaagctttttatacgccaactggagattcccttctccaagattat atttcttatttgtgtatactggaactgggaacagcggacatagcttt	gaattccctctgctctagctcttcctatgagaaagattgtcacgggttct gcatctcatttggcttgagttaatgattacaatttacagcatggaagagt tgagcttttctgtgggtggaaatatctatccatgccaataaccattgttg aaatgaattatgttatcattcagtgcctataattatattttacagagtga ctgtgacaaattttaatagcattgtagaggtcccttggaatgttttgaaa ctattttgaatattattatattatttccgaggttgaaataatagcacaac ataacagctattagttttactctgtgttgcttgaagatcatcaaaaataa aggatgctcaaagctaaaataaaacacagtggcttttattaattatatag atagatgttagaacaaatatctacatttttagaatgatttgaaattctgt aaatgtccatttttttttaccttaacatattggttaataaaaagtatcta aaacttggaatatttatgtaaacatcacatcactaaatattcattcttta cagtagaaaacatggaactcttctaggaatatacttatacatacccatgt gaaacaggaaatattgtcattgaccatgtatgtgggcttctctgtggttc tgcacaagctacatgtagcctggactcctagaaaccttggagacacatac actggtacccttgtaccactactgaagctgattcacgattctgtgttgtc aagtatggctctagtcactttatggtctatcccatgggcctaccaagtag gaccctctcatattttcagtgagaaacagagatccatgtaggaggaataa tgcatccaagaaattcattcagaaaggttatgagtcgtttggtatctata tacggctccgactctgacacacacacacacacacacacacacacacacac acacacacacacacatgagagagagagagagagagagagagagagagaga gagagagagagagagagcttttattgtatgctatgcagctttctatgtaa aacaagccaaacattagcgtggtgctaaatgtttgctttggtggctggct gtcttcagtttcctcctcacttataccagcagttgtagatgcaatgattg aatgagtgacctttggta
quality values	Open. Hide. 58 34 42 33 62 62 62 62 62 62 62 47 56 54 62 62 42 42 62 62 49 62 62 62 54 62 62 62 59 59 62 59 62 59 62 62 59 56 49 62 62 59 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 62 59 62 62 59 62 62 62 62 62 49 62 59 59 62 62 62 62 62 62 62 62 62 59 54 42 42 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 59 59 62 62 54 54 59 59 62 54 62 62 54 62 62 62 62 54 49 54 62 62 59 59 62 62 62 62 33 54 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 62 45 46 62 58 58 58 58 54 54 53 58 58 58 54 58 54 58 54 58 58 58 58 58 58 52 54 58 58 58 54 58 58 58 58 58 58 58 52 58 58 58 58 54 54 58 58 58 54 58 58 58 58 42 58 58 52 58 54 41 58 52 54 54 52 58 52 58 58 58 58 54 58 49 58 58 50 58 58 58 51 54 58 58 51 58 58 58 50 49 58 49 45 49 58 51 51 51 58 58 58 58 58 51 54 48 51 51 49 58 58 51 58 51 52 58 51 51 51 58 51 51 49 49 41 58 49 49 58 53 52 46 51 50 51 58 47 42 58 58 58 36 41 46 50 58 58 51 51 58 51 41 47 49 54 27 41 25 41 51 31 51 51 53 53 50 58 58 52 39 39 42 42 51 52 52 58 50 53 42 42 53 53 52 49 50 54 40 54 49 19 49 25 53 52 47 49 37 40 40 52 52 47 46 52 50 50 41 50 49 37 53 53 28 54 54 35 34 42 49 39 52 41 44 35 46 40 42 54 24 42 46 11 49 32 42 40 44 47 23 54 42 32 53 47 46 37 45 37 29 51 34 53 37 47 52 34 33 32 53 42 52 31 40 37 47 45 31 24 13 51 37 34 24 45 32 28 53 53 51 28 32 29 33 29 32 51 42 35 46 32 52 32 32 29 32 51 18 33 28 47 18 16 51 51 31 31 24 51 46 47 31 29 51 32 28 24 23 23 31 31 31 31 45 46 19 51 23 28 51 51 36 36 51 51 32 30 42 36 31 26 48 46 32 26 37 30 26 25 35 31 28 32 46 22 27 31 31 26 33 37 26 18 11 30 31 38 30 30 14 30 31 16 25 22 23 20 38 46 36 25 10 23 23 12 23 24 30 31 27 31 30 16 36 31 32 32 32 28 37 48 41 37 33 25 39 46 35 38 24 25 31 10 44 44 35 31 25 47 30 24 31 27 35 20 27 15 25 26 27 30 17 14 24 32 29 23 24 22 14 11 24 17 16 29 21 32 33 33 26 14 9 9 16 31 34 34 18 34 32 32 21 32 48 34 29 18 19 32 21 24 18 17 4 4 6 23 14 23 25 28 32 25 21 24 31 47 14 13 13 16 6 22 32 32 27 27 32 27 18 14 22 13 14 27 34 34 20 16 20 7 6 5 21 24 24 11 14 28 27 23 24 22 9 24 15 19 17 21 11 19 6 7 16 7 15 7 21 8 15 24 14 21 16 21 30 6 16 6 34 11 12 4 6 7 24 9 22 10 9 22 13 26 14 13 8 11 3 6 5 6 15 6 4 14 16 16 21 10 4 12 7 11 19 13 9 10 25 30 17 19 8 5 8 12 5 7 7 5 8 9 5 8 9 16 5 8 8 6 25 22 9 5 9 5 13 5 27 4 8 3 2 1 5 4 4 6 5 7 2 1 1 2 5 8 24 9 7 4 12 3 4 5 7 7 4 16 14 5 10 8 8 21 16 5 2 2 5 5 10 18 5 5 7 2 2 4 7 8 8 15 29 4	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr2_66435387_66436581
seq2: B6Ng01-271J03.b_45_1241 (reverse)

seq1  AAAGCTATGCTCTGCTGTTCCCCAGTCCAGTATACACAAATATACAAATA  50
      ||||||||| || |||||||||   ||||||||||||||||| | |||||
seq2  AAAGCTATG-TCCGCTGTTCCCAGTTCCAGTATACACAAATA-AGAAATA  48

seq1  TAATACTGGGAGA--GGGATCT-CAGT--GCGTATAAAAAGCTTACAGTA  95
      |||| || |||||  || |||| ||||  |||||||||||||||||||||
seq2  TAAT-CTTGGAGAAGGGAATCTCCAGTTGGCGTATAAAAAGCTTACAGTA  97

seq1  C-GAGAGTCCATGCCT-CGGAAT-ATTTATTTGCCATGAAGGTCTTGGCA  142
      | |||||  ||||||| |||||| |||||||||||||||||||| |||||
seq2  CGGAGAGGTCATGCCTCCGGAATAATTTATTTGCCATGAAGGTCCTGGCA  147

seq1  TGTGAGTCACTGAAG-AGTTTTCCTGATGAGTCATTTGGTTTTACGCAGC  191
      ||||||||||||||| ||||||||||||||||||||  | ||||||||||
seq2  TGTGAGTCACTGAAGAAGTTTTCCTGATGAGTCATT--GGTTTACGCAGC  195

seq1  AGACCTGAGCTTAGAAATTCAATCAGTGACTAGCTTGTTTGGTGAGCTGT  241
      ||| ||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGA-CTGAGCTTAGAAATTCAATCAGTGACTAGCTTG-TTGGTGAGCTGT  243

seq1  TCTTGTAATTAAATAAAACAATCCCAAGAAATGTAATCGAATAATGCCTG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTAATTAAATAAAACAATCCCAAGAAATGTAATCGAATAATGCCTG  293

seq1  CCCATCAAGAATCTAGAAGCCACACTTTGTCCGTGTGTTTAAGGCAAATT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAAGAATCTAGAAGCCACACTTTGTCCGTGTGTTTAAGGCAAATT  343

seq1  TCTGGCCAACTGTTCTTTAAAAATCAAATTTAACATGACAGGCAAGTTGT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCAACTGTTCTTTAAAAATCAAATTTAACATGACAGGCAAGTTGT  393

seq1  TTTTAACTTCCTTAGGGGCACAGTCAAGTAATCACAAACCCTCAGACCTC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTTCCTTAGGGGCACAGTCAAGTAATCACAAACCCTCAGACCTC  443

seq1  AAACGTGGCACAGAAAAGACTCATTATCTGTGTAACAGCCTTCCAGTGAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTGGCACAGAAAAGACTCATTATCTGTGTAACAGCCTTCCAGTGAC  493

seq1  TGTGGCATGATCTTTAACTTGGATCTTCCTCACTTTAATTTTTAAATATG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCATGATCTTTAACTTGGATCTTCCTCACTTTAATTTTTAAATATG  543

seq1  CAAAAACATATTGCTTGAGAACTATGTTAAAGTGTAACCCATTTTTATGT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACATATTGCTTGAGAACTATGTTAAAGTGTAACCCATTTTTATGT  593

seq1  GCTTAAATTGTCATATGTACCTGCTCCTAAGTGCAATCGATTGAAGAAGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAATTGTCATATGTACCTGCTCCTAAGTGCAATCGATTGAAGAAGA  643

seq1  TTAATGAGACGGTCTATAAATCTGTTAATTCTCACACAAAAACTTCTAGA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAGACGGTCTATAAATCTGTTAATTCTCACACAAAAACTTCTAGA  693

seq1  TTGAAAAACACACATTTCTTAGCAATAAAATATTGAGTTTATTTTATCTA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAACACACATTTCTTAGCAATAAAATATTGAGTTTATTTTATCTA  743

seq1  AGTTAGTCCCTGATCAATAAATCTCTTTATCATAAAGCTTACCATTGCAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTCCCTGATCAATAAATCTCTTTATCATAAAGCTTACCATTGCAA  793

seq1  AGAAGAAAGTTAATTATTAGTGTAAAAATCACTTTTAATAGGCTGGAGAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGTTAATTATTAGTGTAAAAATCACTTTTAATAGGCTGGAGAC  843

seq1  AGCTCAGTAGCAGAATACTTGCCTAACACACACAAGGCCATGGGTTTTAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGTAGCAGAATACTTGCCTAACACACACAAGGCCATGGGTTTTAT  893

seq1  CTTGAGCACCACACACATCAAAATACAAATGACAACAACAAGACATCTTA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGCACCACACACATCAAAATACAAATGACAACAACAAGACATCTTA  943

seq1  ACATAATAAATCAAAATAAAGTTAGATAACCTGTGTGAAATAAAATGATC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATAAATCAAAATAAAGTTAGATAACCTGTGTGAAATAAAATGATC  993

seq1  TATATATGGTGTTCCTGGGTGTTCTCCTGTCTGGGGGCGGGGGTGTAGAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGGTGTTCCTGGGTGTTCTCCTGTCTGGGGGCGGGGGTGTAGAG  1043

seq1  TACAGTTGGGCTCTCAGATGTTCAAGCATTGGCTCTGCATCAGTTGAGTA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGGGCTCTCAGATGTTCAAGCATTGGCTCTGCATCAGTTGAGTA  1093

seq1  AGCTTTCACTGTGGTGTAGACTCTCAGATGCTCTGAAAGTATAGTTCATG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCACTGTGGTGTAGACTCTCAGATGCTCTGAAAGTATAGTTCATG  1143

seq1  TCCCTGGGGCTATGTTTTGCTGTCTGGATGACTTCTTGGGATGCTAAGGA  1191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGGGGCTATGTTTTGCTGTCTGGATGACTTCTTGGGATGCTAAGGA  1193

seq1  ATTC  1195
      ||||
seq2  ATTC  1197

seq1: chr2_66316653_66317821
seq2: B6Ng01-271J03.g_62_1229

seq1  GAATTCCCTCTGCTCTAGCTCTTCCTATGAGAAAGATTGTCACGGGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCTGCTCTAGCTCTTCCTATGAGAAAGATTGTCACGGGTTCT  50

seq1  GCATCTCATTTGGCTTGAGTTAATGATTACAATTTACAGCATGGAAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCATTTGGCTTGAGTTAATGATTACAATTTACAGCATGGAAGAGT  100

seq1  TGAGCTTTTCTGTGGGTGGAAATATCTATCCATGCCAATAACCATTGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTTTCTGTGGGTGGAAATATCTATCCATGCCAATAACCATTGTTG  150

seq1  AAATGAATTATGTTATCATTCAGTGCCTATAATTATATTTTACAGAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATTATGTTATCATTCAGTGCCTATAATTATATTTTACAGAGTGA  200

seq1  CTGTGACAAATTTTAATAGCATTGTAGAGGTCCCTTGGAATGTTTTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACAAATTTTAATAGCATTGTAGAGGTCCCTTGGAATGTTTTGAAA  250

seq1  CTATTTTGAATATTATTATATTATTTCCGAGGTTGAAATAATAGCACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGAATATTATTATATTATTTCCGAGGTTGAAATAATAGCACAAC  300

seq1  ATAACAGCTATTAGTTTTACTCTGTGTTGCTTGAAGATCATCAAAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGCTATTAGTTTTACTCTGTGTTGCTTGAAGATCATCAAAAATAA  350

seq1  AGGATGCTCAAAGCTAAAATAAAACACAGTGGCTTTTATTAATTATATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCTCAAAGCTAAAATAAAACACAGTGGCTTTTATTAATTATATAG  400

seq1  ATAGATGTTAGAACAAATATCTACATTTTTAGAATGATTTGAAATTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGTTAGAACAAATATCTACATTTTTAGAATGATTTGAAATTCTGT  450

seq1  AAATGTCCATTTTTTTTTACCTTAACATATTGGTTAATAAAAAGTATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCATTTTTTTTTACCTTAACATATTGGTTAATAAAAAGTATCTA  500

seq1  AAACTTGGAATATTTATGTAAACATCACATCACTAAATATTCATTCTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGAATATTTATGTAAACATCACATCACTAAATATTCATTCTTTA  550

seq1  CAGTAGAAAACATGGAACTCTTCTAGGAATATACTTATACATACCCATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAAAACATGGAACTCTTCTAGGAATATACTTATACATACCCATGT  600

seq1  GAAACAGGAAATATTGTCATTGACCATGTATGTGGGCTTCTCTGTGGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGGAAATATTGTCATTGACCATGTATGTGGGCTTCTCTGTGGTTC  650

seq1  TGCACAAGCTACATGTAGCCTGGACTCCTAGAAACCTTGGAGACACATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAGCTACATGTAGCCTGGACTCCTAGAAACCTTGGAGACACATAC  700

seq1  ACTGGTACCCTTGTACCACTACTGAAGCTGATTCACGATTCTGTGTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTACCCTTGTACCACTACTGAAGCTGATTCACGATTCTGTGTTGTC  750

seq1  AAGTATGGCTCTAGTCACTTTATGGTCTATCCCATGGGCCTACCAAGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGGCTCTAGTCACTTTATGGTCTATCCCATGGGCCTACCAAGTAG  800

seq1  GACCCTCTCATATTTTCAGTGAGAAACAGAGATCCATGTAGGAGGAATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTCTCATATTTTCAGTGAGAAACAGAGATCCATGTAGGAGGAATAA  850

seq1  TGCATCCAAGAAATTCATTCAG-AAGGTTATGAGTCGTTTGGTATCTATA  899
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGCATCCAAGAAATTCATTCAGAAAGGTTATGAGTCGTTTGGTATCTATA  900

seq1  TACGGCTCCGACTCTGACACACACACACACACACACACACACACACACAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGCTCCGACTCTGACACACACACACACACACACACACACACACACAC  950

seq1  ACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  999
      |||||||||||||||  |||||||||||||||||||||||||||||||||
seq2  ACACACACACACACA-TGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  999

seq1  AGAGAGAGAGAGAGAGAGC-TGTATTGTATGCTATGCAGCTTTCCTATGT  1048
      ||||||||||||||||||| | ||||||||||||||||||||| ||||||
seq2  AGAGAGAGAGAGAGAGAGCTTTTATTGTATGCTATGCAGCTTT-CTATGT  1048

seq1  TAAAAACAAG-CAAACATTAGCGTGTGGCTAAATGTTTGCCTTTGGTGGC  1097
        |||||||| ||||||||||||||  |||||||||||| ||||||||||
seq2  --AAAACAAGCCAAACATTAGCGTGGTGCTAAATGTTTG-CTTTGGTGGC  1095

seq1  TGCCTGTC-TCAGTTT-CTTCTCAC-TATACACACCAGGTTGTAGATTTG  1144
      || ||||| ||||||| || ||||| ||||| || || |||||||| |  
seq2  TGGCTGTCTTCAGTTTCCTCCTCACTTATAC-CAGCA-GTTGTAGA-TGC  1142

seq1  AATGATTGAATGAATGA-CTTTGGTA  1169
      ||||||||||||| ||| ||||||||
seq2  AATGATTGAATGAGTGACCTTTGGTA  1168

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information