BAC Information

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BAC

Clone NameB6Ng01-272O14
Chromosome2 (Build37)
Map Location 152,397,344 - 152,398,290
singlet/doubletsinglet
Overlap genenone
Upstream geneSdcbp2, Snph, LOC668929, BC052486, 5430405G05Rik, Psmf1, Rspo4, Angpt4, 5430432M24Rik, 2310046K01Rik, Scrt2, Srxn1, Tcf15, LOC100043843, Csnk2a1, Tbc1d20, Rbck1, Trib3, LOC628060, Nrsn2, Sox12, Zcchc3, 6820408C15Rik, EG629114, LOC668930, 9230107O10Rik, 9230002F21Rik, EG654457, OTTMUSG00000015852, Defb29
Downstream gene4930525K10Rik, Defb19, OTTMUSG00000015859, Defb36, OTTMUSG00000015862, Rem1, H13, Mcts2, Id1, LOC629170, Cox4i2, Bcl2l1, Tpx2, Mylk2, Fkhl18, Dusp15, Ttll9, Pdrg1, Xkr7, BC020535, Hck, Tm9sf4, Tspyl3, Plagl2, Pofut1, Kif3b, 2500004C02Rik, Asxl1, 8430427H17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272O14.bB6Ng01-272O14.g
ACCGA074619GA074620
length302946
definitionB6Ng01-272O14.b B6Ng01-272O14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacctgtgttgtaagactctataagaagaccattgtcctgatccc
ttaaattggggtgggtaagtttggcacttgatatgttaatggttgttatc
atctagagtggaagactgttattggtcatgatcagggactgataaaaatt
taaagtctccaggcagtggtatcacatgcctttgatcccagcacttggga
ggcagagacaggtagatttctgagttcgaggccagcctggtctacaaagt
gagttcaggacagccagggctatacagaggaaccctgtctcgaaaaacaa
aa
gaattcagtggagtccacagaatgcgctggagatcggggctgggatctct
cagcagagcagcacttagaggattaggaaacgtcttttatttcctgtaac
ttggaggaccacccttgttaaaaatcagactccggatttaatgaaaagat
ttcttatttttacttattacctgtctatgtgagtgttctgcatgtgcatt
tggacacaagagtgcaatacccgaggaggccagaagagggcgtgagatgg
ggagctggagttccagggcatggtgaccaccgcctgatgcaggtcctggg
aactgtggtctctttaaagagcaccatctctccagccaccagacttcaga
tttagtcgtgcagactggtgaggtttggagctggttcagtccataaagca
ttagactcttaattctgccgtttgtataacttcaacataagcttaatata
acgcagttttatcacatggaagcggagctttggtgaaggatgagatccgg
atactcaacaggtatgtggaaccaagtgaaatggagaatttgggatcttt
ctggtccagaagccagccagtttgcctgcgagccttcctcatgacagcct
gacctgagatgagccttggaaattgatagctattctcttgagacccattc
caatactacacagggctgctggaccatatgggccagaacttagcatgctt
aagagggaaggtgccaaagtctagccttggaagacagacctctgtgttag
aagagtgatgagactgttaatttctttaagtatgacctgcagaacatata
tggagccagactttctagagtctgttgggaggggtttttttttggtaata
atttaaaatatttattaatttactttattatattattattatattattat
tattattattattattatcatgtgtgtgtgtgagagagagagatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_152397344_152398290
seq2: B6Ng01-272O14.g_68_1013 (reverse)

seq1  TAATCTCTCTCTCTCACACACACACATGAATAATAATAATAATAATAATA  50
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAATCTCTCTCTCTCACACACACACATG-ATAATAATAATAATAATAATA  49

seq1  ATAATAATAATAATAATAATAATAAAGTAAATTAATAAATATTTTAAATT  100
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATAAT-ATAATAATAAT-ATAATAAAGTAAATTAATAAATATTTTAAATT  97

seq1  ATTACC-AAAAAAAACCCCT-CCAACAGACTCTAGAAAGTCTGGCTCCAT  148
      |||||| ||||||||||||| |||||||||||||||||||||||||||||
seq2  ATTACCAAAAAAAAACCCCTCCCAACAGACTCTAGAAAGTCTGGCTCCAT  147

seq1  ATATGTTCTGCAGGTCATACTTAAAGAAATTAACAGTCTCATCACTCTTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTCTGCAGGTCATACTTAAAGAAATTAACAGTCTCATCACTCTTC  197

seq1  TAACACAGAGGTCTGTCTTCCAAGGCTAGACTTTGGCACCTTCCCTCTTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGAGGTCTGTCTTCCAAGGCTAGACTTTGGCACCTTCCCTCTTA  247

seq1  AGCATGCTAAGTTCTGGCCCATATGGTCCAGCAGCCCTGTGTAGTATTGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCTAAGTTCTGGCCCATATGGTCCAGCAGCCCTGTGTAGTATTGG  297

seq1  AATGGGTCTCAAGAGAATAGCTATCAATTTCCAAGGCTCATCTCAGGTCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTCTCAAGAGAATAGCTATCAATTTCCAAGGCTCATCTCAGGTCA  347

seq1  GGCTGTCATGAGGAAGGCTCGCAGGCAAACTGGCTGGCTTCTGGACCAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCATGAGGAAGGCTCGCAGGCAAACTGGCTGGCTTCTGGACCAGA  397

seq1  AAGATCCCAAATTCTCCATTTCACTTGGTTCCACATACCTGTTGAGTATC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCCAAATTCTCCATTTCACTTGGTTCCACATACCTGTTGAGTATC  447

seq1  CGGATCTCATCCTTCACCAAAGCTCCGCTTCCATGTGATAAAACTGCGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATCTCATCCTTCACCAAAGCTCCGCTTCCATGTGATAAAACTGCGTT  497

seq1  ATATTAAGCTTATGTTGAAGTTATACAAACGGCAGAATTAAGAGTCTAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAGCTTATGTTGAAGTTATACAAACGGCAGAATTAAGAGTCTAAT  547

seq1  GCTTTATGGACTGAACCAGCTCCAAACCTCACCAGTCTGCACGACTAAAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATGGACTGAACCAGCTCCAAACCTCACCAGTCTGCACGACTAAAT  597

seq1  CTGAAGTCTGGTGGCTGGAGAGATGGTGCTCTTTAAAGAGACCACAGTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTCTGGTGGCTGGAGAGATGGTGCTCTTTAAAGAGACCACAGTTC  647

seq1  CCAGGACCTGCATCAGGCGGTGGTCACCATGCCCTGGAACTCCAGCTCCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCTGCATCAGGCGGTGGTCACCATGCCCTGGAACTCCAGCTCCC  697

seq1  CATCTCACGCCCTCTTCTGGCCTCCTCGGGTATTGCACTCTTGTGTCCAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCACGCCCTCTTCTGGCCTCCTCGGGTATTGCACTCTTGTGTCCAA  747

seq1  ATGCACATGCAGAACACTCACATAGACAGGTAATAAGTAAAAATAAGAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATGCAGAACACTCACATAGACAGGTAATAAGTAAAAATAAGAAA  797

seq1  TCTTTTCATTAAATCCGGAGTCTGATTTTTAACAAGGGTGGTCCTCCAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCATTAAATCCGGAGTCTGATTTTTAACAAGGGTGGTCCTCCAAG  847

seq1  TTACAGGAAATAAAAGACGTTTCCTAATCCTCTAAGTGCTGCTCTGCTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGAAATAAAAGACGTTTCCTAATCCTCTAAGTGCTGCTCTGCTGA  897

seq1  GAGATCCCAGCCCCGATCTCCAGCGCATTCTGTGGACTCCACTGAATTC  947
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCCAGCCCCGATCTCCAGCGCATTCTGTGGACTCCACTGAATTC  946