BAC Information

Click to search

BAC

Clone NameB6Ng01-274F22
Chromosome2 (Build37)
Map Location 89,371,728 - 89,516,032
singlet/doubletdoublet
Overlap geneOlfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924
Upstream geneOlfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243
Downstream geneOlfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274F22.bB6Ng01-274F22.g
ACCGA075688GA075689
length1,005967
definitionB6Ng01-274F22.b B6Ng01-274F22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,371,728 - 89,372,542)(89,515,492 - 89,516,032)
sequence
gaattctcttctgaaaaggtttcttttattgaataatctctagggagaaa
agacttggttgatacaacaacaaaattatttaactgccaagtgacataga
ctttactatgaaaagaacaattccaaagtaagactcttaataaactatta
tgagtttttataaatgtattagtataaaatacttagataagacaagtcgt
acatgaaccaaagtaaaaagaaaggcatccctagcctattatcagccaca
taccagcagagaactgctttactctacagtgaaagagactgtccaagaag
ctctgagtccctgcgcaggggaatatatatatacatatacatatatacat
acatacatacatatatatatatatatatatatatatatatatatatatat
aatcagtattcactttacattctgctcactaccccccaattcttccccca
acccacctccccttcttctctaagtgggtgaggattcctgggaatccccc
tacgctgcacatcaagtctacaaggctagtgtcatcttctctcactgaga
ctaaacaagtcagcccagatagaagaacatgtatgtacaggcaacagctt
ttggggtagcccctgctccagttgttcaggacccacgtgaagaccaagct
gcacacctgctacatatgtgcagggagacctagaccaacctgtgtatgtt
ctcttgttggggattcagtctctgaagcacctggggtccagcttagttga
ctctgttggtcttacagtggagttcctatccctttcagacctagaatact
tcctcctattcttttttattacatattttctttatttacatttcaaatgt
tatcccctttcctcatttcccctctaaagatcccttatcccaccccaccc
cctccacctgctcactagttcacccactcctgtttccctgtcctggcatt
cccctacataaaaatgtatatactttggtccttcttagaagggggatcaa
atacc
gaattctacgcgtctcgacccttcgctgacgaagggcctctccacctgga
tttcctctgcattttcttactttaaggagtgggtggggatgggcttgttt
gctattatcctatgaggtggagcgttgcttttgctctggatggcctgtaa
acttaaagcccaaacaaaaagggacaagatggtgatggcccaagcacttg
cagcatttgaacacggtgcctcccctgatatatggttatctatacttaag
caataggtcgctggccgctcagctcttgcaccccacaaggctagtctcat
tgcacgggatagagtgagtgtgcttcagcagcccgagagagttgcacggc
taaacattgcagtagaaaggctctgcggcataaaatgagcctattctaag
gagacatgtcatctcgtatgaaggttgagtgtccaagtgtccttccccca
ggaaaaacgacatgggagcagaccaagacccctctgggtgatgagcctag
gagaaggttttgtgtaatgcccctaattttgcacactggggatttgacct
ctatctccactctcagtactgggtggcctgttgtcttttaaataaaagga
aagggggagatgtaaggagcagcccttgcaatcatatccggtgttctaac
tgataaacaattagtctgcgtatgtgctggggtattttctccattccttg
tgccctgcctgtcccgtggcacgtcatctgggctgatagtgagcagccag
tcaggctgagtcacgtctccaacttgctctttgtgggttataaaaggact
gagtttcctgtattcgaggtctttcctgagatgtaagcaataaaagcttt
gccgtagaagtatctgggttgtcccaagtgtgtttgcttgcgaaacaatt
acaaaggaacaagagttttctgaaagagcttttgaattttctctgccgtt
ggaatggggaagggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89371728_89372542
seq2: B6Ng01-274F22.b_44_862

seq1  GAATTCTCTTCTGAAAAGGTTTCTTTTATTGAATAATCTCTAGGGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCTGAAAAGGTTTCTTTTATTGAATAATCTCTAGGGAGAAA  50

seq1  AGACTTGGTTGATACAACAACAAAATTATTTAACTGCCAAGTGACATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGTTGATACAACAACAAAATTATTTAACTGCCAAGTGACATAGA  100

seq1  CTTTACTATGAAAAGAACAATTCCAAAGTAAGACTCTTAATAAACTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTATGAAAAGAACAATTCCAAAGTAAGACTCTTAATAAACTATTA  150

seq1  TGAGTTTTTATAAATGTATTAGTATAAAATACTTAGATAAGACAAGTCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTTATAAATGTATTAGTATAAAATACTTAGATAAGACAAGTCGT  200

seq1  ACATGAACCAAAGTAAAAAGAAAGGCATCCCTAGCCTATTATCAGCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAACCAAAGTAAAAAGAAAGGCATCCCTAGCCTATTATCAGCCACA  250

seq1  TACCAGCAGAGAACTGCTTTACTCTACAGTGAAAGAGACTGTCCAAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCAGAGAACTGCTTTACTCTACAGTGAAAGAGACTGTCCAAGAAG  300

seq1  CTCTGAGTCCCTGCGCAGGGGAATATATATATACATATACATATATACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTCCCTGCGCAGGGGAATATATATATACATATACATATATACAT  350

seq1  ACATACATAC----ATATATATATATATATATATATATATATATATATAT  396
      ||||||||||    ||||||||||||||||||||||||||||||||||||
seq2  ACATACATACATATATATATATATATATATATATATATATATATATATAT  400

seq1  AATCAGTATTCACTTTACATTCTGCTCACTACCCCCCAATTCTTCCCCCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTATTCACTTTACATTCTGCTCACTACCCCCCAATTCTTCCCCCA  450

seq1  ACCCACCTCCCCTTCTTCTCTAAGTGGGTGAGGATTCCTGGGAATCCCCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCTCCCCTTCTTCTCTAAGTGGGTGAGGATTCCTGGGAATCCCCC  500

seq1  TACGCTGCACATCAAGTCTACAAGGCTAGTGTCATCTTCTCTCACTGAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTGCACATCAAGTCTACAAGGCTAGTGTCATCTTCTCTCACTGAGA  550

seq1  CTAAACAAGTCAGCCCAGATAGAAGAACATGTATGTACAGGCAACAGCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACAAGTCAGCCCAGATAGAAGAACATGTATGTACAGGCAACAGCTT  600

seq1  TTGGGGTAGCCCCTGCTCCAGTTGTTCAGGACCCACGTGAAGACCAAGCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTAGCCCCTGCTCCAGTTGTTCAGGACCCACGTGAAGACCAAGCT  650

seq1  GCACACCTGCTACATATGTGCAGGGAGACCTAGACCAACCTGTGTATGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCTGCTACATATGTGCAGGGAGACCTAGACCAACCTGTGTATGTT  700

seq1  CTCTTGTTGGGGATTCAGTCTCTGAAGCACCTGGGGTCCAGCTTAGTTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTGGGGATTCAGTCTCTGAAGCACCTGGGGTCCAGCTTAGTTGA  750

seq1  CTCTGTTGGTCTTACAGTGGAGTTCCTATCCCTTTCAGACCTAGAATACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTGGTCTTACAGTGGAGTTCCTATCCCTTTCAGACCTAGAATACT  800

seq1  TCCTCCTATTCTTTTTTAT  815
      |||||||||||||||||||
seq2  TCCTCCTATTCTTTTTTAT  819

seq1: chr2_89515492_89516032
seq2: B6Ng01-274F22.g_483_1033 (reverse)

seq1  CCACCCCTCCCCATTCCAACGGCAGAGAAAA-TCAAAAGCTCTTTCAG-A  48
      |||||| |||||||||||||||||||||||| |||||||||||||||| |
seq2  CCACCCTTCCCCATTCCAACGGCAGAGAAAATTCAAAAGCTCTTTCAGAA  50

seq1  AACTCTTGT--CCTTGTAA-TGTTTCGCCAGCAAAACACACTT-GGACAA  94
      |||||||||  | |||||| |||||||| ||| |||||||||| ||||||
seq2  AACTCTTGTTCCTTTGTAATTGTTTCGCAAGC-AAACACACTTGGGACAA  99

seq1  -CCAGATACTTCTACGGCAAAGC-TTTATTGCTTACATCTCAGG-AAGAC  141
       |||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  CCCAGATACTTCTACGGCAAAGCTTTTATTGCTTACATCTCAGGAAAGAC  149

seq1  CTCGAATACAGGAAACTCAGTCCTTTTATAACCCACAAAGAGC-AGTTGG  190
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTCGAATACAGGAAACTCAGTCCTTTTATAACCCACAAAGAGCAAGTTGG  199

seq1  AGACGTGACTCAGCCTGACTGGCTGCTCACTATCAGCCCAGATGACGTGC  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGTGACTCAGCCTGACTGGCTGCTCACTATCAGCCCAGATGACGTGC  249

seq1  CACGGGACAGGCAGGGCACAAGGAATGGAG-AAATACCCCAGCACATACG  289
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CACGGGACAGGCAGGGCACAAGGAATGGAGAAAATACCCCAGCACATACG  299

seq1  CAGACTAATTGTTTATCAGTTAGAACACCGGATATGATTGCAAGGGCTGC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAATTGTTTATCAGTTAGAACACCGGATATGATTGCAAGGGCTGC  349

seq1  TCCTTACATCTCCCCCTTTCCTTTTATTTAAAAGACAACAGGCCACCCAG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACATCTCCCCCTTTCCTTTTATTTAAAAGACAACAGGCCACCCAG  399

seq1  TACTGAGAGTGGAGATAGAGGTCAAATCCCCAGTGTGCAAAATTAGGGGC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGAGTGGAGATAGAGGTCAAATCCCCAGTGTGCAAAATTAGGGGC  449

seq1  ATTACACAAAACCTTCTCCTAGGCTCATCACCCAGAGGGGTCTTGGTCTG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACAAAACCTTCTCCTAGGCTCATCACCCAGAGGGGTCTTGGTCTG  499

seq1  CTCCCATGTCGTTTTTCCTGGGGGAAGGACACTTGGACACTCAACCTTCA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATGTCGTTTTTCCTGGGGGAAGGACACTTGGACACTCAACCTTCA  549

seq1  TA  541
      ||
seq2  TA  551