BAC Information

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BAC

Clone NameB6Ng01-274G12
Chromosome2 (Build37)
Map Location 85,352,316 - 85,353,492
singlet/doubletsinglet
Overlap gene4833423E24Rik
Upstream geneCtnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995
Downstream geneOlfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274G12.bB6Ng01-274G12.g
ACCGA075716GA075717
length1,1841,174
definitionB6Ng01-274G12.b B6Ng01-274G12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtagcttggaatacataagaccatttgtttttacattccct
tgagtaaccccccccctttttttttcagaacttgtatgcttctaggttgt
ggctagcacaagaaacctgagatccaaatgtagggtgagttgtaagtaga
ctgagttatggggagaatgcatctttgtccttgccttgagagagagaagc
agcgtgaaagggtgcccacatgagctttcaggtggctatatctccaccag
agtccctatccttactggaaggccttcatttgctgctttcaggtgaactc
caaccttttctctctatttccattcatctttctctcaccttctccctctc
cctccatcctttcattctcctaccttacaaacttttcttctgatattcta
ataatgggcacccgggtggcttactgaggtgcccacatcaattaagactg
gcatcctccttgtttatctggctacccatcaaacattaaatcatgtctcc
acagtgttactcccactcatcttccctttccagctttgttgttcattctc
catttggactttcaacatgtttctgggactccatcttggctcccttcctt
ttgactgtcttttcttagtttcttagttaattgccaggctgacctctcag
agtggcaacatctttctatgttccattccctcttctttatgtttttgtaa
ttaactttttttactagcagatggtaattatacataacaatcagtttcat
tatggtattatcatatacatacaatttatatatgctattatgaatatata
attttaattacagttatctcttgttcttctcacactctagaagattccct
tcctcttccctcctgtctttctgtctctctttttattccctctccctttt
ttctttcatttgatgacctaatgaatttcattagggttgcttatattatc
ctgagtgagagattatttataggagcatggattccttaacatggctacac
tattgaagaaaagatttctctcttatcgctaggactgttaacttcctatg
gatattcaggaagggtggaggtcctcctgtgcccctcttcttcttagctg
cccatggttcttatttttcatctcttagatctggaatgtcattggctgtt
tctcagacatcaattcaagtgtgtgcactttggc
gaattctcacctgaggaatactgaatagctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggaaaggatgtggagaaagagaaacactcctccattgttggtg
gggttgcaagcttgtacaatcactctggaaatcagtctggcagttcctca
gaaaattggacatggtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgtttcaactagtaagaaagaaacatgctccactat
gttcatagcagccttatttacaatagccaggagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaaaaaaatgtggtacatttac
acaatggagtactactcagctattaaaaagaatgaatttatgaaattcct
aggcaaatggttggacctggagggcattatcatgagtgaggtaacccaat
cacaaaataactcaaatgatatgtactcactgataagtgattattagccc
agaaactagaatacccaatacataagttacaatttgcaaaacacatgaaa
ctcaagaagaacgaagaccaaagtgtggacactttgccccttctttaaat
tgggaacaaaacacccatggcaggagttacagagaccaagtttggagctg
agactaaaggatgaaccatcgagagactgccatatccaaggatccatcct
ataatcagcctccaaacgctgacaccattgcatacactagcaagattttg
ctgaaaggaccctgatatagctgtctcttgtgagactaggctggggccta
gcaaacacataagtggatgctcacagtcagctattggatggatcacaggc
ccccaatggaggagctagagaaagtacccaaggagctaagagatctgcaa
cctgtagtgaacacattctgaactagccagtattccgagctcttgactct
tagctgcatatggtatcaaagatgactagtcgcatcactgcaagagagcc
attgacatgcaactttaatgccagtacaggaaacgcaaggcctaacctgg
actgtggtggtggtattaggcgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85352316_85353492
seq2: B6Ng01-274G12.b_40_1223

seq1  GAATTCCAGGTAGCTTGGAATACATAAGACCATTTGTTTTTACATTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTAGCTTGGAATACATAAGACCATTTGTTTTTACATTCCCT  50

seq1  TGAGTAACCCCCCCCCTTTTTTTTTCAGAACTTGTATGCTTCTAGGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAACCCCCCCCCTTTTTTTTTCAGAACTTGTATGCTTCTAGGTTGT  100

seq1  GGCTAGCACAAGAAACCTGAGATCCAAATGTAGGGTGAGTTGTAAGTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGCACAAGAAACCTGAGATCCAAATGTAGGGTGAGTTGTAAGTAGA  150

seq1  CTGAGTTATGGGGAGAATGCATCTTTGTCCTTGCCTTGAGAGAGAGAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTATGGGGAGAATGCATCTTTGTCCTTGCCTTGAGAGAGAGAAGC  200

seq1  AGCGTGAAAGGGTGCCCACATGAGCTTTCAGGTGGCTATATCTCCACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGAAAGGGTGCCCACATGAGCTTTCAGGTGGCTATATCTCCACCAG  250

seq1  AGTCCCTATCCTTACTGGAAGGCCTTCATTTGCTGCTTTCAGGTGAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTATCCTTACTGGAAGGCCTTCATTTGCTGCTTTCAGGTGAACTC  300

seq1  CAACCTTTTCTCTCTATTTCCATTCATCTTTCTCTCACCTTCTCCCTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTTTCTCTCTATTTCCATTCATCTTTCTCTCACCTTCTCCCTCTC  350

seq1  CCTCCATCCTTTCATTCTCCTACCTTACAAACTTTTCTTCTGATATTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATCCTTTCATTCTCCTACCTTACAAACTTTTCTTCTGATATTCTA  400

seq1  ATAATGGGCACCCGGGTGGCTTACTGAGGTGCCCACATCAATTAAGACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGGGCACCCGGGTGGCTTACTGAGGTGCCCACATCAATTAAGACTG  450

seq1  GCATCCTCCTTGTTTATCTGGCTACCCATCAAACATTAAATCATGTCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTCCTTGTTTATCTGGCTACCCATCAAACATTAAATCATGTCTCC  500

seq1  ACAGTGTTACTCCCACTCATCTTCCCTTTCCAGCTTTGTTGTTCATTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTTACTCCCACTCATCTTCCCTTTCCAGCTTTGTTGTTCATTCTC  550

seq1  CATTTGGACTTTCAACATGTTTCTGGGACTCCATCTTGGCTCCCTTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGACTTTCAACATGTTTCTGGGACTCCATCTTGGCTCCCTTCCTT  600

seq1  TTGACTGTCTTTTCTTAGTTTCTTAGTTAATTGCCAGGCTGACCTCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGTCTTTTCTTAGTTTCTTAGTTAATTGCCAGGCTGACCTCTCAG  650

seq1  AGTGGCAACATCTTTCTATGTTCCATTCCCTCTTCTTTATGTTTTTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAACATCTTTCTATGTTCCATTCCCTCTTCTTTATGTTTTTGTAA  700

seq1  TTAACTTTTTTTACTAGCAGATGGTAATTATACATAACAATCAGTTTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTTTTTACTAGCAGATGGTAATTATACATAACAATCAGTTTCAT  750

seq1  TATGGTATTATCATATACATACAATTTATATATGCTATTATGAATATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTATTATCATATACATACAATTTATATATGCTATTATGAATATATA  800

seq1  ATTTTAATTACAGTTATCTCTTGTTCTTCTCACACTCTAGAAGATTCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTACAGTTATCTCTTGTTCTTCTCACACTCTAGAAGATTCCCT  850

seq1  TCCTCTTCCCTCCTGTCTTTCTGTCTCTCTTTTTATTCCCTCTCCCTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTCCCTCCTGTCTTTCTGTCTCTCTTTTTATTCCCTCTCCCTTTT  900

seq1  TTCTTTCATTTGATGACCTAATGAATTTCATTAGGGTTGCTTATATTATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCATTTGATGACCTAATGAATTTCATTAGGGTTGCTTATATTATC  950

seq1  CTGAGTGAGAGATTATTTATAGGAGCATGGATTCCTTAAACATGGCTACA  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGAGTGAGAGATTATTTATAGGAGCATGGATTCCTT-AACATGGCTACA  999

seq1  CTATTGAAGAAAAGATTTCTCTC-TATCGCTAGGACTGTTAACTTCCTAT  1049
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTATTGAAGAAAAGATTTCTCTCTTATCGCTAGGACTGTTAACTTCCTAT  1049

seq1  GGATATTCAGGAAGGGT-GAGGT-CTCCTGTGCCCCTCT--CTCTTAGCT  1095
      ||||||||||||||||| ||||| |||||||||||||||   ||||||||
seq2  GGATATTCAGGAAGGGTGGAGGTCCTCCTGTGCCCCTCTTCTTCTTAGCT  1099

seq1  G-CCATGG-TCT--ATTTTCATCTCCTAGAATCTGGAATGTCTTTTGTCT  1141
      | |||||| |||   |||||||||| ||| ||||||||||||  ||| ||
seq2  GCCCATGGTTCTTATTTTTCATCTCTTAG-ATCTGGAATGTC-ATTGGCT  1147

seq1  GTTTTTCTCAGCCATCAA-TCAA--GTGTGCACTTTGGC  1177
      |  |||||||| |||||| ||||  ||||||||||||||
seq2  G--TTTCTCAGACATCAATTCAAGTGTGTGCACTTTGGC  1184