BAC Information

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BAC

Clone NameB6Ng01-276A19
Chromosome2 (Build37)
Map Location 120,024,999 - 120,154,137
singlet/doubletdoublet
Overlap genePla2g4e, LOC100043635, Pla2g4d, Pla2g4f, Vps39
Upstream geneDnajc17, Zfyve19, Ppp1r14d, Spint1, Rhov, Vps18, LOC100043609, Dll4, Chac1, Inoc1, LOC100043612, Exdl1, 1500003O03Rik, LOC100043307, Oip5, Nusap1, Ndufaf1, LOC625328, LOC100043622, Rtf1, Itpka, Ltk, Rpap1, Tyro3, 6330405D24Rik, LOC625403, Mga, Mapkbp1, Pla2g4b, Spnb5, Ehd4
Downstream geneTmem87a, Ganc, Capn3, Zfp106, Snap23, Lrrc57, Cep27, Stard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276A19.bB6Ng01-276A19.g
ACCGA076925GA076926
length1,067369
definitionB6Ng01-276A19.b B6Ng01-276A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,153,069 - 120,154,137)(120,024,999 - 120,025,372)
sequence
gaattctttgagagtttcatataatgtattttgatcatttttaccttaac
tctttccaaacctcctaattttgtatcctctaaaaaaaaccaacaaaaca
aaacaaaaaacaacaacaaaaaaaaccccaaaactccaatttttgctctc
tatatacttctaggtgtgggaccatcctctggggccacacctttaagaaa
tctctaactgacacacacactcctttagaaaccacctgctatccatagct
ccttggttaagggtgggggctgttttgttttgtttaaactaaatcttcat
attagtaagcatattcacagtaagttatatgacctaaaaggggtaaattt
taattgttcagaactttttcataccataaataattgtgagggaaatgcct
atagtttaggaaacatagaaaatataaaccaaagggccacagtggtgcaa
acctttaatcccaacacttgggaggcagaggcaggcagatctctgtgagt
tcaagaccagcctggtctacatagtgagctctggaatcagagctacacac
tgaaaccctgtctctaaaacaagcaaacaaacaaaaagtataagccaaag
aagttgccaacactttagctctgtttagtttcttatgtgtattcatgcac
tagcttctatctgtctgagttaggatttatgttatgtgtatggtggattt
tatgacgtgtgccagtgtagcatagcacatgtttgcttccattagcagag
gagagaagagcatcgcatcctctggagttacaggcagttggaagccacca
tgtgagtgctgggaatcgaacccaggtcctctctgaaggaaagccagtgc
tcttaccactgagccatctctccagcctgtttagttttttttttattcct
ttattacaaataaaaatcaaagtatattttctgttttacagtttgcagct
tgaaatttagccatatattgggaaagtccttacttgtcaatagttagttt
actgtatgttatggcctgatttttttttcagtttactctatggacagaat
aatatgaaagtttaaag
ctgtggcctgtggaatgcagcaggagacagaggggaagttaggctataaa
gaattcctgccccggggtctagcaaacacagaagtggatgctcacagtca
gctaatggatggatcacagggctcccaatggaggagctagagaaagtacc
caaggagctaaagggatctgcaaccctataggtggaacaacattatgaac
taaccagtaccccggagctcttgactctagctgcatatgtatcaaaagat
ggcctagccggccatcactggaaagagaggcccattggacttgcaaactt
tatatgccccagtacaggggaatgccagggctaaaaagtgggagtgggtg
gataggtgagagggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_120153069_120154137
seq2: B6Ng01-276A19.b_46_1112 (reverse)

seq1  CTTTAAACTTTCATATTA-TCTGTCCATAAGAGTAAACTGAAAAAAAAAA  49
      |||||||||||||||||| ||||||||| ||||||||||| |||||||||
seq2  CTTTAAACTTTCATATTATTCTGTCCAT-AGAGTAAACTG-AAAAAAAAA  48

seq1  TCAGGCCATAAACATACAGTAAACTAACTATTGACAAGTAAGGACTTTCC  99
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCAT-AACATACAGTAAACTAACTATTGACAAGTAAGGACTTTCC  97

seq1  CAATATATGGCTAAATTTCAAGCTGCAAACTGTAAAACAGAAAATATACT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATGGCTAAATTTCAAGCTGCAAACTGTAAAACAGAAAATATACT  147

seq1  TTGATTTTTATTTGTAATAAAGGAATAAAAAAAAAACTAAACAGGCTGGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTTATTTGTAATAAAGGAATAAAAAAAAAACTAAACAGGCTGGA  197

seq1  GAGATGGCTCAGTGGTAAGAGCACTGGCTTTCCTTCAGAGAGGACCTGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTCAGTGGTAAGAGCACTGGCTTTCCTTCAGAGAGGACCTGGG  247

seq1  TTCGATTCCCAGCACTCACATGGTGGCTTCCAACTGCCTGTAACTCCAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATTCCCAGCACTCACATGGTGGCTTCCAACTGCCTGTAACTCCAGA  297

seq1  GGATGCGATGCTCTTCTCTCCTCTGCTAATGGAAGCAAACATGTGCTATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCGATGCTCTTCTCTCCTCTGCTAATGGAAGCAAACATGTGCTATG  347

seq1  CTACACTGGCACACGTCATAAAATCCACCATACACATAACATAAATCCTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTGGCACACGTCATAAAATCCACCATACACATAACATAAATCCTA  397

seq1  ACTCAGACAGATAGAAGCTAGTGCATGAATACACATAAGAAACTAAACAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGACAGATAGAAGCTAGTGCATGAATACACATAAGAAACTAAACAG  447

seq1  AGCTAAAGTGTTGGCAACTTCTTTGGCTTATACTTTTTGTTTGTTTGCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAAGTGTTGGCAACTTCTTTGGCTTATACTTTTTGTTTGTTTGCTT  497

seq1  GTTTTAGAGACAGGGTTTCAGTGTGTAGCTCTGATTCCAGAGCTCACTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAGACAGGGTTTCAGTGTGTAGCTCTGATTCCAGAGCTCACTAT  547

seq1  GTAGACCAGGCTGGTCTTGAACTCACAGAGATCTGCCTGCCTCTGCCTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGGTCTTGAACTCACAGAGATCTGCCTGCCTCTGCCTCC  597

seq1  CAAGTGTTGGGATTAAAGGTTTGCACCACTGTGGCCCTTTGGTTTATATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTGGGATTAAAGGTTTGCACCACTGTGGCCCTTTGGTTTATATT  647

seq1  TTCTATGTTTCCTAAACTATAGGCATTTCCCTCACAATTATTTATGGTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTTTCCTAAACTATAGGCATTTCCCTCACAATTATTTATGGTAT  697

seq1  GAAAAAGTTCTGAACAATTAAAATTTACCCCTTTTAGGTCATATAACTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGTTCTGAACAATTAAAATTTACCCCTTTTAGGTCATATAACTTA  747

seq1  CTGTGAATATGCTTACTAATATGAAGATTTAGTTTAAACAAAACAAAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAATATGCTTACTAATATGAAGATTTAGTTTAAACAAAACAAAACA  797

seq1  GCCCCCACCCTTAACCAAGGAGCTATGGATAGCAGGTGGTTTCTAAAGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCACCCTTAACCAAGGAGCTATGGATAGCAGGTGGTTTCTAAAGGA  847

seq1  GTGTGTGTGTCAGTTAGAGATTTCTTAAAGGTGTGGCCCCAGAGGATGGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTCAGTTAGAGATTTCTTAAAGGTGTGGCCCCAGAGGATGGT  897

seq1  CCCACACCTAGAAGTATATAGAGAGCAAAAATTGGAGTTTTGGGGTTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACCTAGAAGTATATAGAGAGCAAAAATTGGAGTTTTGGGGTTTTT  947

seq1  TTTGTTGTTGTTTTTTGTTTTGTTTTGTTGGTTTTTTTTAGAGGATACAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGTTGTTTTTTGTTTTGTTTTGTTGGTTTTTTTTAGAGGATACAA  997

seq1  AATTAGGAGGTTTGGAAAGAGTTAAGGTAAAAATGATCAAAATACATTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGAGGTTTGGAAAGAGTTAAGGTAAAAATGATCAAAATACATTAT  1047

seq1  ATGAAACTCTCAAAGAATTC  1069
      ||||||||||||||||||||
seq2  ATGAAACTCTCAAAGAATTC  1067

seq1: chr2_120024999_120025372
seq2: B6Ng01-276A19.g_70_444

seq1  GAATTCCTGTGGCCTG-GGAATGCAGCAGGAGACAGAGGGGAAGTTAGGC  49
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGGCCTGTGGAATGCAGCAGGAGACAGAGGGGAAGTTAGGC  50

seq1  TATAAAGAATTCCTGCCCCGGGGTCTAGCAAACACAGAAGTGGATGCTCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGAATTCCTGCCCCGGGGTCTAGCAAACACAGAAGTGGATGCTCA  100

seq1  CAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGGAGGAGCTAGAGAA  150

seq1  AGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATT  200

seq1  ATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCA  250

seq1  AAAGATGGCCTAGCCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGGCCTAGCCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTGC  300

seq1  AAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCTAAAAAGTGGGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCTAAAAAGTGGGAG  350

seq1  TGGGTGGATAGGTGAGAGGGGGAGG  374
      |||||||||||||||||||||||||
seq2  TGGGTGGATAGGTGAGAGGGGGAGG  375