MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-282C19
Chromosome	2 (Build37)
Map Location	123,522,738 - 123,523,342
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Slc30a4, Pldn, Sqrdl
Downstream gene	4930517E11Rik, LOC100043360, Sema6d
Link	Open Mouse BAC browser

Click to get alignment info.

name	Slc30a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22785 MGI:1345282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pldn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18457 MGI:1927580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sqrdl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59010 MGI:1929899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930517E11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74702 MGI:1921952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100043360 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043360
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Sema6d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214968 MGI:2387661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	Slc30a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52630420 GeneID:22785 MGI:1345282
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 30 (zinc transporter), member 4 transcript_id : NM_011774.2

name	Pldn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110578650 GeneID:18457 MGI:1927580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pallidin transcript_id : NM_019788.3

name	Sqrdl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981548 GeneID:59010 MGI:1929899
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sulfide quinone reductase-like (yeast) transcript_id : NM_021507.4

name	4930517E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249984 GeneID:74702 MGI:1921952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930517E11 gene transcript_id : XM_001480033.1

name	Sema6d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40385868 GeneID:214968 MGI:2387661
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D transcript_id : NM_172537.2

name	Sema6d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40385870 GeneID:214968 MGI:2387661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D transcript_id : NM_199239.1

name	Sema6d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40385878 GeneID:214968 MGI:2387661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D transcript_id : NM_199241.1

name	Sema6d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40385876 GeneID:214968 MGI:2387661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D transcript_id : NM_199240.1

name	Sema6d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40385874 GeneID:214968 MGI:2387661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D transcript_id : NM_199238.1

name	Slc30a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52630421 CCDS:CCDS16667.1 GeneID:22785 MGI:1345282
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008324 - cation transporter activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0006829 - zinc ion transport [Evidence IEA] codon_start : 1 note : zinc transporter 4; lethal milk; solute carrier family 30 (zinc transporter) member 4 product : solute carrier family 30 (zinc transporter), member 4 protein_id : NP_035904.2

name	Pldn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790039 CCDS:CCDS16668.1 GeneID:18457 MGI:1927580
definition	GO_component : GO:0005768 - endosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006944 - membrane fusion [Evidence IPI]; GO:0006904 - vesicle docking during exocytosis [Evidence TAS]; GO:0006906 - vesicle fusion [Evidence TAS] codon_start : 1 note : syntaxin 13-interacting protein pallid; syntaxin 13 binding protein 1 product : pallidin protein_id : NP_062762.1

name	Sqrdl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981549 CCDS:CCDS16669.1 GeneID:59010 MGI:1929899
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation note : flavo-binding protein; sulfide dehydrogenase-like product : sulfide quinone reductase-like protein_id : NP_067482.3

name	4930517E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249985 GeneID:74702 MGI:1921952
definition	codon_start : 1 product : hypothetical protein LOC74702 protein_id : XP_001480083.1

name	Sema6d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40385871 GeneID:214968 MGI:2387661
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 note : isoform 5 is encoded by transcript variant 5; semaphorin 6D product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D isoform 5 protein_id : NP_954709.1

name	Sema6d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40385869 CCDS:CCDS16670.1 GeneID:214968 MGI:2387661
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; semaphorin 6D product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D isoform 1 protein_id : NP_766125.2

name	Sema6d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40385879 CCDS:CCDS16673.1 GeneID:214968 MGI:2387661
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 note : isoform 4 is encoded by transcript variant 4; semaphorin 6D product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D isoform 4 protein_id : NP_954711.1

name	Sema6d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40385877 CCDS:CCDS16672.1 GeneID:214968 MGI:2387661
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 note : isoform 6 is encoded by transcript variant 6; semaphorin 6D product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D isoform 6 protein_id : NP_954710.1

name	Sema6d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40385875 CCDS:CCDS16671.1 GeneID:214968 MGI:2387661
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; semaphorin 6D product : sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D isoform 2 protein_id : NP_954708.1

name	LOC100043360 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043360
definition	number : 2 pseudo : _no_value

name	LOC100043360 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043360
definition	number : 1 pseudo : _no_value

clone name	MSMg01-130M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485M19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-513K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386B15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-375G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272E16
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-282C19.b	B6Ng01-282C19.g
ACC	GA081462	GA081463
length	1,232	605
definition	B6Ng01-282C19.b	B6Ng01-282C19.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctgattggatgaggtagggtggagctagaggaggtcagtcagggt gagtataggagggttgttgttgttgcccttgcctaagtggagaggttgtt gtaagaaaagctgcaagaagaagtaaaagaagaagctgttgtgtgaaccc gacttggtgtccgtgtcattcttgtctctgcgggtcggagactgtggcac attgcaaatgatttatccttacagattaaaacatctcttgacaacccaaa agaaacacaaattcctaaacacagtctttacccaaacgaaccatggatga atagaaaacaacattcaataaaattaaatcaataataaaatatctccaat taggtattgccaaggatcagaaagcttcacagctagattttatgaaatat tgaaggaattaattcactaggtcttaaacgtcaatgatgaagaatgaatt cctcccaaccatttggtgtgacaaactccatcaggatgctgaaagccagg agtgtagaatgtgaaaacaagagagtagattccaccatcttgatgagcat gtacgaagaaatcttcaacaaaatgtaagaaaattgaatcggtgttgcac attataaatgttattttcaataatcatgtgggatttgtttcagggctgta agggtgacgaacatatacaaatcaatggatgaaacacgtgtaaacagaat ggaagaaatttacacatgatcatctcactggggaaaaggcactgcagaaa attcaatattccttccagataaaatgtttaaataaatgaggtagagcgaa cagagctcaatataataaaagaaacacaaagggacagctggcagactgaa cagggaaatattacaagctgctctatagactccagcacagagctaccagg gtccacgccttttacttaccacagtactggaagttgtagcaagaatcagc aggcaagagaaagaattaaaaagacatccatatacaaaaaagaagtcaga ttttcactgtttaatatactgaatcattcttcttatgcataaaagtcaaa aagagacattaaccatattattgaaacaaaacctaaagttaattgaacag gtaacatgttagccaaatctacactatcaaaggattattatgcacctggc tttggtggacgaatcattggaaccaaaatggtagaagaaaaccggcttca cctatatatcaccgatgtatggatgcacacat	gaattcctgtgccaacaaaagttccatttggtaccttgctttccatgcag gattcatggtttattaacttcaaatacgaagcttcccaaaaattttaaca aacatataatattaaaaataattttcaaagtgttaaaaatgatagacaaa atgaaaatacaccacaaatttgtgtgatgattttaaataataaaaacttc agcaacaaaagcacacaatacatttaaggaagtaaagaaatagagactta aaaactaaggacaagtttgaaatgttacaaaaagagacaaaactcagtag aggactagactagaactttccatttgttatttccatgggtgagaaattct ttttttttaattttttattaggtattttcctcaattacatttccaatgct atcccaaaagtccctcataccctcccccccaatcccctacccacccactc ccatttattggccctggcgttcccctgtactgaggcatataaagtttgca agtccaatgggcctctcttgccactgatggccggctaggccatcttctga tacatatgcagctagagacaggagctccagggcagggagggggcgggggg agggg
quality values	Open. Hide. 58 31 22 39 58 58 42 62 39 39 62 62 62 37 37 62 62 47 47 56 62 54 62 49 62 62 62 47 62 62 42 29 25 21 23 32 29 35 43 50 62 59 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 42 62 62 59 62 62 59 62 62 59 59 62 62 59 59 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 49 59 59 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 56 62 62 56 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 56 62 62 54 54 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 43 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 54 62 62 62 62 54 62 54 54 58 58 58 58 58 54 58 58 58 52 58 52 58 54 52 54 46 54 58 54 46 54 58 54 54 54 58 58 58 45 47 58 58 54 58 48 58 58 54 54 54 52 58 54 33 58 58 58 54 58 54 58 41 50 52 52 52 47 58 58 54 58 52 54 58 52 58 49 49 39 41 58 58 58 54 52 58 52 54 52 58 58 58 58 54 54 58 58 58 45 54 58 58 58 47 54 58 51 51 41 45 58 58 58 34 38 58 51 52 58 51 58 50 54 58 53 58 58 58 42 25 58 54 58 37 58 54 46 50 33 58 58 51 58 54 53 34 48 47 58 46 39 54 58 40 51 58 48 42 50 51 49 51 53 58 43 54 58 54 52 52 37 49 58 58 25 21 47 58 58 49 50 32 28 41 51 58 47 40 54 50 52 33 40 58 43 31 54 46 50 51 28 54 58 32 37 42 50 50 42 28 43 30 47 47 38 47 53 42 54 42 46 42 52 41 37 46 58 58 58 52 58 58 49 31 50 25 28 31 40 50 51 33 17 54 54 54 32 17 54 37 26 52 40 41 54 27 31 40 35 35 30 37 31 32 51 27 32 54 54 50 35 49 31 51 54 49 54 44 49 50 54 29 34 53 53 23 54 21 53 32 32 23 51 33 44 32 39 40 33 33 35 31 45 32 35 30 51 40 41 23 37 46 21 54 54 42 40 53 53 46 34 28 28 31 45 39 46 47 46 24 21 31 32 34 26 20 38 16 21 23 32 21 34 18 9 40 25 17 31 47 26 22 49 30 43 31 22 29 31 30 27 32 28 31 26 31 34 28 30 36 29 30 29 29 33 29 45 24 33 25 24 32 28 31 29 34 51 32 31 35 28 32 31 28 33 48 33 12 32 34 16 18 22 31 31 31 31 46 31 20 31 21 28 28 31 24 20 31 32 18 13 27 38 34 36 38 38 31 26 32 33 36 21 31 19 28 9 11 35 17 31 31 32 31 21 27 13 18 19 17 20 29 17 34 11 25 44 27 17 43 23 9 19 32 41 44 44 16 13 13 13 17 11 10 44 24 21 25 31 19 31 24 41 21 41 38 17 35 23 16 26 33 20 13 11 35 17 48 48 28 25 16 22 20 22 6 33 14 34 31 30 15 15 13 22 25 32 11 11 26 34 14 24 18 22 7 9 7 24 22 23 21 21 37 14 18 15 39 33 32 11 9 9 19 30 31 34 8 6 6 8 20 13 13 26 27 9 6 15 9 9 17 11 3 5 9 9 17 7 7 29 10 21 6 30 17 8 6 9 14 9 23 9 15 17 18 13 11 17 8 13 14 14 12 5 7 5 7 5 7 20 7 14 16 11 6 4 6 12 10 5 18 3 7 6 6 11 4 3 2 2 4 6 6 6 5 14 13 12 7 8 5 9 6 7 10 5 5 23 9 21 10 8 9 6 11 10 7 4 5 4 10 7 6 8 5 2 3 7 6 8 4 10 4 4 6 14 3 3 6 6 11 20 6 6 6 7 4 4 5 12 5 6 18 29 4 3 5 4 15 9 4 4 4 6 4 8 10 3 1 9 7 7 5 17 6 6 4 4 6 7 4 10 6 14 7 24 9 2 2 5 4 3 8 5 3 6 4	Open. Hide. 62 35 50 59 62 62 62 62 62 49 62 39 43 16 27 36 27 28 32 36 50 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 49 62 62 59 62 62 62 59 59 62 62 59 62 62 54 54 62 59 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 54 42 49 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 45 42 58 58 58 41 43 58 58 58 58 58 58 58 58 58 48 54 54 54 58 58 58 58 58 58 48 58 58 58 54 58 58 47 58 51 58 54 58 58 58 58 58 58 58 58 50 49 48 47 58 58 48 58 58 41 54 58 51 49 51 58 50 58 46 54 51 58 38 46 58 58 49 41 48 50 58 58 48 48 48 58 49 36 28 49 49 58 58 50 46 58 58 43 41 41 26 19 39 19 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_123522738_123523342
seq2: B6Ng01-282C19.g_66_670

seq1  GAATTCCTGTGCCAACAAAAGTTCCATTTGGTACCTTGCTTTCCATGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGCCAACAAAAGTTCCATTTGGTACCTTGCTTTCCATGCAG  50

seq1  GATTCATGGTTTATTAACTTCAAATACGAAGCTTCCCAAAAATTTTAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATGGTTTATTAACTTCAAATACGAAGCTTCCCAAAAATTTTAACA  100

seq1  AACATATAATATTAAAAATAATTTTCAAAGTGTTAAAAATGATAGACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATAATATTAAAAATAATTTTCAAAGTGTTAAAAATGATAGACAAA  150

seq1  ATGAAAATACACCACAAATTTGTGTGATGATTTTAAATAATAAAAACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATACACCACAAATTTGTGTGATGATTTTAAATAATAAAAACTTC  200

seq1  AGCAACAAAAGCACACAATACATTTAAGGAAGTAAAGAAATAGAGACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAAAGCACACAATACATTTAAGGAAGTAAAGAAATAGAGACTTA  250

seq1  AAAACTAAGGACAAGTTTGAAATGTTACAAAAAGAGACAAAACTCAGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAGGACAAGTTTGAAATGTTACAAAAAGAGACAAAACTCAGTAG  300

seq1  AGGACTAGACTAGAACTTTCCATTTGTTATTTCCATGGGTGAGAAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAGACTAGAACTTTCCATTTGTTATTTCCATGGGTGAGAAATTCT  350

seq1  TTTTTTTTAATTTTTTATTAGGTATTTTCCTCAATTACATTTCCAATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAATTTTTTATTAGGTATTTTCCTCAATTACATTTCCAATGCT  400

seq1  ATCCCAAAAGTCCCTCATACCCTCCCCCCCAATCCCCTACCCACCCACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAAAGTCCCTCATACCCTCCCCCCCAATCCCCTACCCACCCACTC  450

seq1  CCATTTATTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTATTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCA  500

seq1  AGTCCAATGGGCCTCTCTTGCCACTGATGGCCGGCTAGGCCATCTTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAATGGGCCTCTCTTGCCACTGATGGCCGGCTAGGCCATCTTCTGA  550

seq1  TACATATGCAGCTAGAGACAGGAGCTCCAGGGCAGGGAGGGGGCGGGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGCAGCTAGAGACAGGAGCTCCAGGGCAGGGAGGGGGCGGGGGG  600

seq1  AGGGG  605
      |||||
seq2  AGGGG  605

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information