BAC Information

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BAC

Clone NameB6Ng01-282H16
Chromosome2 (Build37)
Map Location 142,415,112 - 142,574,819
singlet/doubletdoublet
Overlap geneKif16b
Upstream geneLOC668913, LOC668914
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282H16.bB6Ng01-282H16.g
ACCGA081686GA081687
length5581,119
definitionB6Ng01-282H16.b B6Ng01-282H16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(142,574,262 - 142,574,819)(142,415,112 - 142,416,233)
sequence
gaattcctgctgtgtcccaaatactttagtttttcgttgatcctcctgtt
tctctcttccatggaaattggagttttcttgattctactctttcttctac
attgtgtaactatacctgtatccagggcgaaggatttaaaggacacgggg
aaggaaaatacagccaggggagcctgctccaccgccctgggtccaatagc
tcagagacctgctgctgcttccacttgccaccagtgatctcctggcttct
tatccagactaaagcagaggttttctcctggagttctcacttcataccag
taagcatgtttgagtttcctcttagtctgagccaagaataaaaaaatggc
cattgtcagtttggttgcactttgatatccaaacccactctaatctccat
agcagtattaaatgccacaaagcactgctgatgttaatgataagcttgta
ttgaaaacactcttttagtggttttttcttttttctttgtttctttcttt
gtttctttgtttctctctctctctctctctctctctctctctctctctct
cactctct

gaattcagccttcagggctgagttctcaatcagtgataccactgggcttc
cagaaggacttgccagcccctaatctttgtctccctgtaaacaaacactt
gcccttttcaagtttcactgattcatcctccttccctaaggccaagggag
tccttggaatgacccagcctgggtccatgagagggtttattctctttgtg
cctggagtcctatcccagagcccccaggcagcagtttcctccttagggag
ccaaggacaccctcgggagcaatgaggcctgggcctggtttaattaacct
ttgttaacaatcagttccttgaaggagccaccctctgtgactaatcctct
atgttctgatggtgctttgctccaaagccaccttctctatacatctgctc
acaagaggggcatcttctctctgtgcctggcagcccctttggtcacacta
ctgcagggctccattgtctgggctgctgtcatcctggaattaatctgaaa
gtggtctctttgacaacagaggcagcaaatatcggattcaatttgctttc
acccaagatttcccaggagtcatggcgaatgagataatcgatggtgatta
tgaggcttggcctgcctcactgagcccgcgtgttaaaaggagggagagtt
tctgctccggtgctcgcccaagtcaggtgctaattccggcagatccatta
cctttctcagcgcctctaaaccatatgtgctgcaataatcatgctgggta
ggtaaggcgatcagtcctcccgcctaagcaaagaggattcattctttttg
cttctcttcacattccacaacaacaacaacaacaaaaatgttctgagcat
ctggtgcagaagtgagtaggctgttcgaaccaatgatgccgaagagattt
aatttaactgggctaaactttccttgtctcagctggagagactagtcaat
ggcttagccactaatccaatccaaagaaagcattaaattacttgtcgatg
ccaatcttacctgagaagactgttttcagctttgctgatcattctaaaga
cctcgcattcaaggaggaaacgcagagcaaatgactggaggagcgggaga
catcttcagattgctctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142574262_142574819
seq2: B6Ng01-282H16.b_48_605 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAC  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAC  50

seq1  AAAGAAACAAAGAAAGAAACAAAGAAAAAAGAAAAAACCACTAAAAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACAAAGAAAGAAACAAAGAAAAAAGAAAAAACCACTAAAAGAGT  100

seq1  GTTTTCAATACAAGCTTATCATTAACATCAGCAGTGCTTTGTGGCATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAATACAAGCTTATCATTAACATCAGCAGTGCTTTGTGGCATTTA  150

seq1  ATACTGCTATGGAGATTAGAGTGGGTTTGGATATCAAAGTGCAACCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCTATGGAGATTAGAGTGGGTTTGGATATCAAAGTGCAACCAAAC  200

seq1  TGACAATGGCCATTTTTTTATTCTTGGCTCAGACTAAGAGGAAACTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATGGCCATTTTTTTATTCTTGGCTCAGACTAAGAGGAAACTCAAA  250

seq1  CATGCTTACTGGTATGAAGTGAGAACTCCAGGAGAAAACCTCTGCTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTACTGGTATGAAGTGAGAACTCCAGGAGAAAACCTCTGCTTTAG  300

seq1  TCTGGATAAGAAGCCAGGAGATCACTGGTGGCAAGTGGAAGCAGCAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATAAGAAGCCAGGAGATCACTGGTGGCAAGTGGAAGCAGCAGCAG  350

seq1  GTCTCTGAGCTATTGGACCCAGGGCGGTGGAGCAGGCTCCCCTGGCTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGAGCTATTGGACCCAGGGCGGTGGAGCAGGCTCCCCTGGCTGTA  400

seq1  TTTTCCTTCCCCGTGTCCTTTAAATCCTTCGCCCTGGATACAGGTATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTCCCCGTGTCCTTTAAATCCTTCGCCCTGGATACAGGTATAGT  450

seq1  TACACAATGTAGAAGAAAGAGTAGAATCAAGAAAACTCCAATTTCCATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATGTAGAAGAAAGAGTAGAATCAAGAAAACTCCAATTTCCATGG  500

seq1  AAGAGAGAAACAGGAGGATCAACGAAAAACTAAAGTATTTGGGACACAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAAACAGGAGGATCAACGAAAAACTAAAGTATTTGGGACACAGC  550

seq1  AGGAATTC  558
      ||||||||
seq2  AGGAATTC  558


seq1: chr2_142415112_142416233
seq2: B6Ng01-282H16.g_65_1183

seq1  GAATTCAGCCTTCAGGGCTGAGTTCTCAATCAGTGATACCACTGGGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTTCAGGGCTGAGTTCTCAATCAGTGATACCACTGGGCTTC  50

seq1  CAGAAGGACTTGCCAGCCCCTAATCTTTGTCTCCCTGTAAACAAACACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGACTTGCCAGCCCCTAATCTTTGTCTCCCTGTAAACAAACACTT  100

seq1  GCCCTTTTCAAGTTTCACTGATTCATCCTCCTTCCCTAAGGCCAAGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTTCAAGTTTCACTGATTCATCCTCCTTCCCTAAGGCCAAGGGAG  150

seq1  TCCTTGGAATGACCCAGCCTGGGTCCATGAGAGGGTTTATTCTCTTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGAATGACCCAGCCTGGGTCCATGAGAGGGTTTATTCTCTTTGTG  200

seq1  CCTGGAGTCCTATCCCAGAGCCCCCAGGCAGCAGTTTCCTCCTTAGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAGTCCTATCCCAGAGCCCCCAGGCAGCAGTTTCCTCCTTAGGGAG  250

seq1  CCAAGGACACCCTCGGGAGCAATGAGGCCTGGGCCTGGTTTAATTAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGACACCCTCGGGAGCAATGAGGCCTGGGCCTGGTTTAATTAACCT  300

seq1  TTGTTAACAATCAGTTCCTTGAAGGAGCCACCCTCTGTGACTAATCCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAACAATCAGTTCCTTGAAGGAGCCACCCTCTGTGACTAATCCTCT  350

seq1  ATGTTCTGATGGTGCTTTGCTCCAAAGCCACCTTCTCTATACATCTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGATGGTGCTTTGCTCCAAAGCCACCTTCTCTATACATCTGCTC  400

seq1  ACAAGAGGGGCATCTTCTCTCTGTGCCTGGCAGCCCCTTTGGTCACACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGGGGCATCTTCTCTCTGTGCCTGGCAGCCCCTTTGGTCACACTA  450

seq1  CTGCAGGGCTCCATTGTCTGGGCTGCTGTCATCCTGGAATTAATCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGGCTCCATTGTCTGGGCTGCTGTCATCCTGGAATTAATCTGAAA  500

seq1  GTGGTCTCTTTGACAACAGAGGCAGCAAATATCGGATTCAATTTGCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTCTTTGACAACAGAGGCAGCAAATATCGGATTCAATTTGCTTTC  550

seq1  ACCCAAGATTTCCCAGGAGTCATGGCGAATGAGATAATCGATGGTGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAGATTTCCCAGGAGTCATGGCGAATGAGATAATCGATGGTGATTA  600

seq1  TGAGGCTTGGCCTGCCTCACTGAGCCCGCGTGTTAAAAGGAGGGAGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTTGGCCTGCCTCACTGAGCCCGCGTGTTAAAAGGAGGGAGAGTT  650

seq1  TCTGCTCCGGTGCTCGCCCAAGTCAGGTGCTAATTCCGGCAGATCCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCCGGTGCTCGCCCAAGTCAGGTGCTAATTCCGGCAGATCCATTA  700

seq1  CCTTTCTCAGCGCCTCTAAACCATATGTGCTGCAATAATCATGCTGGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTCAGCGCCTCTAAACCATATGTGCTGCAATAATCATGCTGGGTA  750

seq1  GGTAAGGCGATCAGTCCTCCCGCCTAAGCAAAGAGGATTCATTCTTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGGCGATCAGTCCTCCCGCCTAAGCAAAGAGGATTCATTCTTTTTG  800

seq1  CTTCTCTTCACATTCCACAACAACAACAACAACAAAAATGTTCTGAGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTCACATTCCACAACAACAACAACAACAAAAATGTTCTGAGCAT  850

seq1  CTGGTGCAGAAGTGAGTAGGCTGTTCGAACCAATGATGCCGAAGAGATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCAGAAGTGAGTAGGCTGTTCGAACCAATGATGCCGAAGAGATTT  900

seq1  AATTTAACTGGGCTAAACTTTCCTTGTCTCAGCTGGAGAGACTAGTCAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAACTGGGCTAAACTTTCCTTGTCTCAGCTGGAGAGACTAGTCAAT  950

seq1  GGCTTAGCCACTAATCCAATCAAAAGAAAGCATTAAATTACTTGTCGATG  1000
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGCTTAGCCACTAATCCAATCCAAAGAAAGCATTAAATTACTTGTCGATG  1000

seq1  CC-ATCTTAACCCTGAGAAGACTGTTTTCAGCTTGGCTGATCATTCTAAA  1049
      || ||||||  ||||||||||||||||||||||| |||||||||||| ||
seq2  CCAATCTTA--CCTGAGAAGACTGTTTTCAGCTTTGCTGATCATTCT-AA  1047

seq1  AGACCTCGGCATCCAGGGAAGAAACGCAGAGCAAATGACT-GAGGAGCGG  1098
      ||||||| |||| || ||| |||||||||||||||||||| |||||||||
seq2  AGACCTC-GCATTCAAGGAGGAAACGCAGAGCAAATGACTGGAGGAGCGG  1096

seq1  GAGACATCTTCCAGATGCCTCTCG  1122
      |||||||||| |||||  ||||||
seq2  GAGACATCTT-CAGATTGCTCTCG  1119


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