BAC Information

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BAC

Clone NameB6Ng01-282I15
Chromosome3 (Build37)2 (Build37)
Map Location 64,830,196 - 64,830,234110,679,011 - 110,680,173
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110
Downstream geneKcnab1, Ssr3, EG433604, EG667093, LOC100041083, 4931440P22Rik, Tiparp, LOC545530, LOC100040978, EG624866, Ccnl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282I15.bB6Ng01-282I15.g
ACCGA081728GA081729
length6941,158
definitionB6Ng01-282I15.b B6Ng01-282I15.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,830,196 - 64,830,234)(110,679,011 - 110,680,173)
sequence
gaattcatgcaatttttaggcaaatggatggaactagaaaatatcatcct
gagtgaggtaacccaatcacaaaagaacacacatggtatgaacttactgt
taagtggatattagcctaaaagcacagaatacccaagatacaattcaaag
accatataagctcaagaaggaaggccaaagtgtggatgtttcagtccttc
ttagaagggagaacaaagtactaatgggagcaaaaacaaacaaggagtgg
aataaagactgaaggaaaggccatccagggactgccccacctgggcatcc
agtccatatacagttaccaaatgcaaacattattgtggatgccaagaagt
gcatgctgacaggagcctgatataactgtctcctgagaggctctgccagg
gcctgacatatacagaggtggattgatctgatcatgcggtccccaatggg
ggagatagagaaatgactgaaggagctgaaggggttggcaaccccatagg
aagaacaacaattcaaccaaccagagcttccaggttataaaccaccaacc
aaggagtacacatggagggattcatggctccagctgcatatgtagcagag
gatgaccttgtcgggcatcaatggaaggagaggcccttggtcctgtgaaa
gcttgatggcctagtgtaggggaatgtgagggtggggaggcagg
gaattccaaatgcagctgatcccagaactctgaatgtggtatgtttaaaa
gtgcctcaatctaggaattttgtactgccgttctgtttggttaagcatgc
atagtgaaagcaaggaagaataacaggtattgattttcaaaattgagaat
ggagagttttaaatttttcttgatgctagaaatgaatctgttaaagtgaa
atggtgtgatctaaatgtggatttgataatgagtggtgtgtatcttgcat
gcagaacagttaccacctctcggtgacgttttggctgtgcttagatgtat
tacttttggtttcatgaaaaaaagtattcagaaattctacctaaaataga
tgtagatatggaattatgtaaagcatattctttttaaggatacgtgtttt
ctgatcattcttaaggtataatttcatctgtgacttctttgctaatgtca
aagtacagagtctcagaagaaatgctgtaaggaaggaaaacaggattaaa
cctgaaactacagaaatgacctgactttgaatagctctagtatgctggga
aagggcatgtcttcaacctgctttctttgtgttctatgcccttaaaagtt
actcttaaagtatttaccatttcatcaatatttgttttcatttctttctt
tagaaataagaaacaatcccatttacaaatcagaaaatatatatctgcac
tcagagtctgatcacttaaaattgatagtcactgacatggaagtaagttt
tcatggagaaaaagtatttacaagattccttatgtgacatttaatataac
aatcatttactaggaacagtatctgctaagatattctctgtaaactaatt
ctgcaaagtaaatattcaaaatttacatgttgcattaagaacacaacagg
aaactatagtctgtgctccatcattgtctactcaaaatacttggctttga
ctttttcttagataaatcagagattattattgtatgataaataaaattaa
gagaaaatattttcaatatagcacttagcctagtgttgctaacatcgcaa
caaattcaaattgtgttgcttctctctgtcatacattttatggtttcctg
cctaaggactatttgctttggtagtactgttaacttctttatcgatatgt
tttatgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64830196_64830234
seq2: B6Ng01-282I15.b_702_740 (reverse)

seq1  CCTGCCTCCCCAGCCTCCAATTCCCCTACACTAGGCCAT  39
      |||||||||||| ||||  ||||||||||||||||||||
seq2  CCTGCCTCCCCACCCTCACATTCCCCTACACTAGGCCAT  39

seq1: chr2_110679011_110680173
seq2: B6Ng01-282I15.g_67_1224 (reverse)

seq1  GTCATAAAACATATCCAT-AAGAGAGTAACAGTACTAAACAAACACAAAT  49
      ||||||||||||||| || ||||   ||||||||||  || ||  |||||
seq2  GTCATAAAACATATCGATAAAGAAGTTAACAGTACT--ACCAAAGCAAAT  48

seq1  AGTCCCTAAGCAAGAAAACAT-AAATGTATGGACAAGAGAGAAGCAAACA  98
      ||||| || ||| |||| ||| |||||||| ||| |||||||||| ||||
seq2  AGTCCTTAGGCAGGAAACCATAAAATGTAT-GAC-AGAGAGAAGC-AACA  95

seq1  CATTTTGAATTTG-TGCGATG-TAGCAAACACTAGGCTAAGTGCTATATT  146
      || |||||||||| ||||||| |||| |||||||||||||||||||||||
seq2  CAATTTGAATTTGTTGCGATGTTAGC-AACACTAGGCTAAGTGCTATATT  144

seq1  GAAAATATTTTTCCTCTTAATTTTATTTATTCAATACAAT-ATAATCTCT  195
      |||||||||||  |||||||||||||||||   ||||||| |||||||||
seq2  GAAAATATTTT--CTCTTAATTTTATTTAT--CATACAATAATAATCTCT  190

seq1  GATTTATCTAAGAAAAAGTCAAAGCCAAGTATTTTGAGTAGACAATGATG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATCTAAGAAAAAGTCAAAGCCAAGTATTTTGAGTAGACAATGATG  240

seq1  GAGCACAGACTATAGTTTCCTGTTGTGTTCTTAATGCAACATGTAAATTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAGACTATAGTTTCCTGTTGTGTTCTTAATGCAACATGTAAATTT  290

seq1  TGAATATTTACTTTGCAGAATTAGTTTACAGAGAATATCTTAGCAGATAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTTACTTTGCAGAATTAGTTTACAGAGAATATCTTAGCAGATAC  340

seq1  TGTTCCTAGTAAATGATTGTTATATTAAATGTCACATAAGGAATCTTGTA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTAGTAAATGATTGTTATATTAAATGTCACATAAGGAATCTTGTA  390

seq1  AATACTTTTTCTCCATGAAAACTTACTTCCATGTCAGTGACTATCAATTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTTTCTCCATGAAAACTTACTTCCATGTCAGTGACTATCAATTT  440

seq1  TAAGTGATCAGACTCTGAGTGCAGATATATATTTTCTGATTTGTAAATGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGATCAGACTCTGAGTGCAGATATATATTTTCTGATTTGTAAATGG  490

seq1  GATTGTTTCTTATTTCTAAAGAAAGAAATGAAAACAAATATTGATGAAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTTCTTATTTCTAAAGAAAGAAATGAAAACAAATATTGATGAAAT  540

seq1  GGTAAATACTTTAAGAGTAACTTTTAAGGGCATAGAACACAAAGAAAGCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATACTTTAAGAGTAACTTTTAAGGGCATAGAACACAAAGAAAGCA  590

seq1  GGTTGAAGACATGCCCTTTCCCAGCATACTAGAGCTATTCAAAGTCAGGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAGACATGCCCTTTCCCAGCATACTAGAGCTATTCAAAGTCAGGT  640

seq1  CATTTCTGTAGTTTCAGGTTTAATCCTGTTTTCCTTCCTTACAGCATTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGTAGTTTCAGGTTTAATCCTGTTTTCCTTCCTTACAGCATTTC  690

seq1  TTCTGAGACTCTGTACTTTGACATTAGCAAAGAAGTCACAGATGAAATTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGACTCTGTACTTTGACATTAGCAAAGAAGTCACAGATGAAATTA  740

seq1  TACCTTAAGAATGATCAGAAAACACGTATCCTTAAAAAGAATATGCTTTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTAAGAATGATCAGAAAACACGTATCCTTAAAAAGAATATGCTTTA  790

seq1  CATAATTCCATATCTACATCTATTTTAGGTAGAATTTCTGAATACTTTTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTCCATATCTACATCTATTTTAGGTAGAATTTCTGAATACTTTTT  840

seq1  TTCATGAAACCAAAAGTAATACATCTAAGCACAGCCAAAACGTCACCGAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAAACCAAAAGTAATACATCTAAGCACAGCCAAAACGTCACCGAG  890

seq1  AGGTGGTAACTGTTCTGCATGCAAGATACACACCACTCATTATCAAATCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTAACTGTTCTGCATGCAAGATACACACCACTCATTATCAAATCC  940

seq1  ACATTTAGATCACACCATTTCACTTTAACAGATTCATTTCTAGCATCAAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAGATCACACCATTTCACTTTAACAGATTCATTTCTAGCATCAAG  990

seq1  AAAAATTTAAAACTCTCCATTCTCAATTTTGAAAATCAATACCTGTTATT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTAAAACTCTCCATTCTCAATTTTGAAAATCAATACCTGTTATT  1040

seq1  CTTCCTTGCTTTCACTATGCATGCTTAACCAAACAGAACGGCAGTACAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTGCTTTCACTATGCATGCTTAACCAAACAGAACGGCAGTACAAA  1090

seq1  ATTCCTAGATTGAGGCACTTTTAAACATACCACATTCAGAGTTCTGGGAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAGATTGAGGCACTTTTAAACATACCACATTCAGAGTTCTGGGAT  1140

seq1  CAGCTGCATTTGGAATTC  1163
      ||||||||||||||||||
seq2  CAGCTGCATTTGGAATTC  1158