BAC Information

Click to search

BAC

Clone NameB6Ng01-282K03
Chromosome2 (Build37)
Map Location 59,554,677 - 59,672,748
singlet/doubletdoublet
Overlap geneTanc1
Upstream geneLOC674940, Upp2, BC062650, Pkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016
Downstream geneWdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1, Itgb6, Rbms1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282K03.bB6Ng01-282K03.g
ACCGA081798GA081799
length1,0751,139
definitionB6Ng01-282K03.b B6Ng01-282K03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,671,669 - 59,672,748)(59,554,677 - 59,555,812)
sequence
gaattccacggtgctcaggtgtccctcacaggaagccaccatgagaggtg
ttcgaccctgcttgtcactcaggttcacgtcgcagccgcgatccaaaagc
aatcggacaacctgaagaagcaccgagaataatcagcactgagaagcccg
tctccacaccacagccgctttctccatctctcccaccagcggcgtgatgc
gtggggctcaagcgatctttctactgcattcacttcaacaaaaccttctt
ctatgtatctttcagttattaagtgtacgagaatcacgtatcagggagaa
acagtagtgagacatgccagtcacaacaggtgatgacaggacagccactg
ggggagaggaatgttccaaattggtcctgaggagaagcacagcgccctga
gtatctggggttctgcagcgatagatccaaccagttacactcagtctgta
gatggaatgcaaatactgtgccgttctaagagaatcgagcttcctcagac
ttgacatctgcaggtaatgctgagaggggaactaccgttacgagagaagg
gtctaaggctggagagtgactctgaacccttggttacatgctttgctaag
atgcagcacgaggggtggcttgtcctcagaggacaactgtcagcaaaatt
ccagcatcagcaatgtgcttatgccacacatgctactaacagttggggag
aaagatcagaaactcaggaaggagtccgatgtactccttgtgctggaggg
agccattttatccgctgggtcagcctggaggttgcctggcacattccctg
catgttacattgccagagtggcagaggtggcaccatcccaggttctcaca
ttattcaccagcaaactcctcccaccttccccgtgagttaggaaacactg
agacaggcagagggttagatgctattacagacgctattctataatgagtg
agtggtcttgaagttgtttgtgtgcacgatccaagcgtcacaggtactga
gtgcgggcagagatgtgtcattgttttcaaaacaaaggagaagctgctgg
acaatgatgcctgttccttgaattc
gaattcacttgtggttgttttttgagttgcctgctttgtggttcctttgt
tcacacagctctagaacggctcaatagccaggcaccgctgggctctgctc
tttgcagcatcctgtttaagcacattgaaaaacacataccttggtctgtg
acaatcttttcttaagctttcgatacagagtttttaccaggtgacattag
gactgtgtcttcctccagggaagcagcatagaacctaatgggtctgttag
actgtattcctcctgtcagaacagagttttgctttaatgactttattttc
caggtttcttctgagaaacatcttttgttctccatctgtaatcttttctc
acatcattaagctttcttgccattttcctctatggcctggggaaactctc
ctgagctctttatcagtgctgggtaatgataaagtagtggtggacccagg
actgtgctgcaaactatgtgatcctgaacagcctaggccaaccactccat
gttccaccagggtgcccagcatttatgaatggtgttctctgttgtctttc
tctgagtcttaaagatgctcacttcccgaggggctagaggggcggctcag
tgggtaagagtactaccatttgttcttccagaggacctggagttcaattt
acagtacccatattggagtttacaactgtctgtaattccagttccagggg
atccaacactttcacacagacatacaggtaggcaaaacaccaatgcacat
aaaataaaataaaccatttttttaaagctacttactttcctttcattgat
aaactatataatttatcagctccttaccactgacgattttaggggaggcc
tgttgtgtaaagggaacctgtttaatggaggtccaggaagggttcatgct
gggagacttggggtgaagcagcctcagtggagggaatagggactctattg
cccagctgactgggaatgtggttagtcacgcattgttgcaacaacaaaga
atgctccagtgttcttctttttagatgctagattttctagtcaccttcct
gtttcttcggggtttggcctctttggttgacagaccttttaacttggcct
ctaggaagcctttgcataacgccttgggtgcgttacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_59671669_59672748
seq2: B6Ng01-282K03.b_43_1117 (reverse)

seq1  GAATTCAAGGGAACAGGGCATCATTGTCCAGCAGCTTCTTCCTTTGTTTT  50
      |||||||| |||||| |||||||||||||||||||||| |||||||||||
seq2  GAATTCAA-GGAACA-GGCATCATTGTCCAGCAGCTTC-TCCTTTGTTTT  47

seq1  G-AAACAATGACCACATCTCTGCCCGCACTCAGTACCCTGTGACGCTTGG  99
      | ||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  GAAAACAATGA-CACATCTCTGCCCGCACTCAGTA-CCTGTGACGCTTGG  95

seq1  ATCGTGCACACAAACAACTTCAAGACCACTCACTCATTATAGAATAGCGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGCACACAAACAACTTCAAGACCACTCACTCATTATAGAATAGCGT  145

seq1  CTGTAATAGCATCTAACCCTCTGCCTGTCTCAGTGTTTCCTAACTCACGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAATAGCATCTAACCCTCTGCCTGTCTCAGTGTTTCCTAACTCACGG  195

seq1  GGAAGGTGGGAGGAGTTTGCTGGTGAATAATGTGAGAACCTGGGATGGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTGGGAGGAGTTTGCTGGTGAATAATGTGAGAACCTGGGATGGTG  245

seq1  CCACCTCTGCCACTCTGGCAATGTAACATGCAGGGAATGTGCCCAGGCAA  299
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCACCTCTGCCACTCTGGCAATGTAACATGCAGGGAATGTG-CCAGGCAA  294

seq1  CCTCCAGGCTGACCCAGCGGATAAAATGGCTCCCTCCAGCACAAGGAGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGGCTGACCCAGCGGATAAAATGGCTCCCTCCAGCACAAGGAGTA  344

seq1  CATCGGACTCCTTCCTGAGTTTCTGATCTTTCTCCCCAACTGTTAGTAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGGACTCCTTCCTGAGTTTCTGATCTTTCTCCCCAACTGTTAGTAGC  394

seq1  ATGTGTGGCATAAGCACATTGCTGATGCTGGAATTTTGCTGACAGTTGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGGCATAAGCACATTGCTGATGCTGGAATTTTGCTGACAGTTGTC  444

seq1  CTCTGAGGACAAGCCACCCCTCGTGCTGCATCTTAGCAAAGCATGTAACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGACAAGCCACCCCTCGTGCTGCATCTTAGCAAAGCATGTAACC  494

seq1  AAGGGTTCAGAGTCACTCTCCAGCCTTAGACCCTTCTCTCGTAACGGTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTCAGAGTCACTCTCCAGCCTTAGACCCTTCTCTCGTAACGGTAG  544

seq1  TTCCCCTCTCAGCATTACCTGCAGATGTCAAGTCTGAGGAAGCTCGATTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCTCAGCATTACCTGCAGATGTCAAGTCTGAGGAAGCTCGATTC  594

seq1  TCTTAGAACGGCACAGTATTTGCATTCCATCTACAGACTGAGTGTAACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAACGGCACAGTATTTGCATTCCATCTACAGACTGAGTGTAACTG  644

seq1  GTTGGATCTATCGCTGCAGAACCCCAGATACTCAGGGCGCTGTGCTTCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATCTATCGCTGCAGAACCCCAGATACTCAGGGCGCTGTGCTTCTC  694

seq1  CTCAGGACCAATTTGGAACATTCCTCTCCCCCAGTGGCTGTCCTGTCATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGACCAATTTGGAACATTCCTCTCCCCCAGTGGCTGTCCTGTCATC  744

seq1  ACCTGTTGTGACTGGCATGTCTCACTACTGTTTCTCCCTGATACGTGATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTGTGACTGGCATGTCTCACTACTGTTTCTCCCTGATACGTGATT  794

seq1  CTCGTACACTTAATAACTGAAAGATACATAGAAGAAGGTTTTGTTGAAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTACACTTAATAACTGAAAGATACATAGAAGAAGGTTTTGTTGAAGT  844

seq1  GAATGCAGTAGAAAGATCGCTTGAGCCCCACGCATCACGCCGCTGGTGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAGTAGAAAGATCGCTTGAGCCCCACGCATCACGCCGCTGGTGGG  894

seq1  AGAGATGGAGAAAGCGGCTGTGGTGTGGAGACGGGCTTCTCAGTGCTGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGGAGAAAGCGGCTGTGGTGTGGAGACGGGCTTCTCAGTGCTGAT  944

seq1  TATTCTCGGTGCTTCTTCAGGTTGTCCGATTGCTTTTGGATCGCGGCTGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCGGTGCTTCTTCAGGTTGTCCGATTGCTTTTGGATCGCGGCTGC  994

seq1  GACGTGAACCTGAGTGACAAGCAGGGTCGAACACCTCTCATGGTGGCTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGAACCTGAGTGACAAGCAGGGTCGAACACCTCTCATGGTGGCTTC  1044

seq1  CTGTGAGGGACACCTGAGCACCGTGGAATTC  1080
      |||||||||||||||||||||||||||||||
seq2  CTGTGAGGGACACCTGAGCACCGTGGAATTC  1075

seq1: chr2_59554677_59555812
seq2: B6Ng01-282K03.g_67_1205

seq1  GAATTCACTTGTGGTTGTTTTTTGAGTTGCCTGCTTTGTGGTTCCTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTGGTTGTTTTTTGAGTTGCCTGCTTTGTGGTTCCTTTGT  50

seq1  TCACACAGCTCTAGAACGGCTCAATAGCCAGGCACCGCTGGGCTCTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGCTCTAGAACGGCTCAATAGCCAGGCACCGCTGGGCTCTGCTC  100

seq1  TTTGCAGCATCCTGTTTAAGCACATTGAAAAACACATACCTTGGTCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGCATCCTGTTTAAGCACATTGAAAAACACATACCTTGGTCTGTG  150

seq1  ACAATCTTTTCTTAAGCTTTCGATACAGAGTTTTTACCAGGTGACATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTTTTCTTAAGCTTTCGATACAGAGTTTTTACCAGGTGACATTAG  200

seq1  GACTGTGTCTTCCTCCAGGGAAGCAGCATAGAACCTAATGGGTCTGTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGTCTTCCTCCAGGGAAGCAGCATAGAACCTAATGGGTCTGTTAG  250

seq1  ACTGTATTCCTCCTGTCAGAACAGAGTTTTGCTTTAATGACTTTATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATTCCTCCTGTCAGAACAGAGTTTTGCTTTAATGACTTTATTTTC  300

seq1  CAGGTTTCTTCTGAGAAACATCTTTTGTTCTCCATCTGTAATCTTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTCTTCTGAGAAACATCTTTTGTTCTCCATCTGTAATCTTTTCTC  350

seq1  ACATCATTAAGCTTTCTTGCCATTTTCCTCTATGGCCTGGGGAAACTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATTAAGCTTTCTTGCCATTTTCCTCTATGGCCTGGGGAAACTCTC  400

seq1  CTGAGCTCTTTATCAGTGCTGGGTAATGATAAAGTAGTGGTGGACCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTCTTTATCAGTGCTGGGTAATGATAAAGTAGTGGTGGACCCAGG  450

seq1  ACTGTGCTGCAAACTATGTGATCCTGAACAGCCTAGGCCAACCACTCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCTGCAAACTATGTGATCCTGAACAGCCTAGGCCAACCACTCCAT  500

seq1  GTTCCACCAGGGTGCCCAGCATTTATGAATGGTGTTCTCTGTTGTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACCAGGGTGCCCAGCATTTATGAATGGTGTTCTCTGTTGTCTTTC  550

seq1  TCTGAGTCTTAAAGATGCTCACTTCCCGAGGGGCTAGAGGGGCGGCTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCTTAAAGATGCTCACTTCCCGAGGGGCTAGAGGGGCGGCTCAG  600

seq1  TGGGTAAGAGTACTACCATTTGTTCTTCCAGAGGACCTGGAGTTCAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAAGAGTACTACCATTTGTTCTTCCAGAGGACCTGGAGTTCAATTT  650

seq1  ACAGTACCCATATTGGAGTTTACAACTGTCTGTAATTCCAGTTCCAGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACCCATATTGGAGTTTACAACTGTCTGTAATTCCAGTTCCAGGGG  700

seq1  ATCCAACACTTTCACACAGACATACAGGTAGGCAAAACACCAATGCACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAACACTTTCACACAGACATACAGGTAGGCAAAACACCAATGCACAT  750

seq1  AAAATAAAATAAACCATTTTTTTAAAGCTACTTACTTTCCTTTCATTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATAAACCATTTTTTTAAAGCTACTTACTTTCCTTTCATTGAT  800

seq1  AAACTATATAATTTATCAGCTCCTTACCACTGACGATTTTAGGGGAGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATATAATTTATCAGCTCCTTACCACTGACGATTTTAGGGGAGGCC  850

seq1  TGTTGTGTAAGGGGAACCTGTTTAATGGAGGTCCAGGAAGGGTTCATGCT  900
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGTAAAGGGAACCTGTTTAATGGAGGTCCAGGAAGGGTTCATGCT  900

seq1  GGGAGACTTGGGGTGAAGCAGCCTCAGTGGAGGGAATAGGGACTCTATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACTTGGGGTGAAGCAGCCTCAGTGGAGGGAATAGGGACTCTATTG  950

seq1  CCCAGCTGACT-GGAATGTGGTTAAGTCACGCATTGTTGCAACAACAAAG  999
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  CCCAGCTGACTGGGAATGTGGTT-AGTCACGCATTGTTGCAACAACAAAG  999

seq1  GATGCTCCAGTG-TCTTC-TTTTAGATTGCTAAGGTTTTTCTAGTCACC-  1046
       ||||||||||| ||||| ||||||| |||||  | ||||||||||||| 
seq2  AATGCTCCAGTGTTCTTCTTTTTAGA-TGCTA--GATTTTCTAGTCACCT  1046

seq1  TCCTGTTTC-TCGGGGTTTTGCCTCTTT-GTTGACAGACATTTTA--CTG  1092
      ||||||||| ||||||||| |||||||| |||||||||| |||||   ||
seq2  TCCTGTTTCTTCGGGGTTTGGCCTCTTTGGTTGACAGACCTTTTAACTTG  1096

seq1  GGCTCTAGGGAGGCTTTGCATAACGCCT--GGTGCGGTTTTACACA  1136
      | ||||||| || |||||||||||||||  ||||||   |||||||
seq2  GCCTCTAGGAAGCCTTTGCATAACGCCTTGGGTGCG---TTACACA  1139