BAC Information

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BAC

Clone NameB6Ng01-282K07
Chromosome2 (Build37)
Map Location 87,920,126 - 87,920,670
singlet/doubletsinglet
Overlap genenone
Upstream geneGA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038, LOC668445, LOC668447, Olfr1129, Olfr1130, Olfr1131, Olfr1132, LOC100042076, Olfr1133, Olfr1134, Olfr1135, Olfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163
Downstream geneOlfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282K07.bB6Ng01-282K07.g
ACCGA081806GA081807
length5311,083
definitionB6Ng01-282K07.b B6Ng01-282K07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgaatttgtgagcaaagggagggaggaagggatagggggttttcagttgg
gaaccaggtaaggggataacatttgaaatgtaaataaagaaaatatctaa
taaaaaaagggaagaaacagagaaaatgaagagatatatggctcttatac
agggcctgagtagaacactctttctcatatcttgtttcccagtagagaca
ctttaagaaacatttaatctttgatattaaaatataaaataatgtacaaa
tacattagaatccttttcaaattgatattttccatttccctccatcaatt
tctaggttttattttatttcggagataattaaattacaataattctccat
tccttttctcccaccattagcctcccaaatttgggttttcactacccatc
taatctacagtctttttaatctatttttgtatatatcttatagatgtaac
aatattatgcatacacattcctaagtagactatttgattagtgtggtgaa
ctagtatgtatagtgtgttctgagttttgaa
gaattccttgaatgaatttggctagggtttttttatgttttcaattttct
ttgacaattatgtcaatcttttctctggtatcttctacatgtgaaattct
ctattctatctcttgtattctgttggtgataattacatctgtaatttctg
gcctttttcctaagttttccatttccaagtttgcctccattagtggtatc
tttagttatttctacttccacttttaggtcttggattgctttatttaatt
ccttcacctgtttgcctgtattttcttgtattcctttcagtgagttattg
atatcctccttaaagtacactattatcatcttgggataggatttcagtac
acattcctgattttcaggtgtgttgtattcatggcttcctgtggttggag
aactggtttctgatgatgcctgcatatattggcttcaattgcttatggtg
ttgtgcttgcctttccccatctgaatatcccttgtgttttttgttctggg
tgactgtctggagcctgcccttttttgttcctgggtttctttatgtcttc
tgataggcctgtagccttgactctagcagaccaactgtaggggcttccaa
caggaaactcttcacagtagcagagaagattctgatctgttgtcctggct
gcaatagatctcgtgggaggtcttaaaactgttgggtctttagtggagca
gtcaagttgttatccaactgctctgcgtacatctgatcatcaactattct
gagtgcagtggatactcaaatgctctgagtacagcaaatactttacaact
ctgagtgcagtgggttcttaatagttctaagtgcattgggttttcaactg
atctgagtgcatcggcttctctaggatggatcagggtgtgggcgtcttca
ctggatcagaccagcccaagagtctgacacagcagaaaggacagggcaga
ggggtagaggtatgaaaaggggaatggatttcaggacgcatgggttttag
ttgggtgatggtctcttgagtccactgggccttctatgcagcaagctctg
ggaactctaggtgagttgggggaggagtggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_87920126_87920670
seq2: B6Ng01-282K07.b_46_582

seq1  GAATTCTGAATTTGTGAGCAAAGGGAGGGAGGAAGGGATAGGGGGTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAATTTGTGAGCAAAGGGAGGGAGGAAGGGATAGGGGGTTTTC  50

seq1  AGTTGGGAAACCAGGTAAGGGGATAACATTTGAAATGTAAATAAAGAAAA  100
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGG-AACCAGGTAAGGGGATAACATTTGAAATGTAAATAAAGAAAA  99

seq1  TAACTAATAAAAAAAGGGAAGAAACAGAGAAAATGAAGAGATATATGGCT  150
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATAAAAAAAGGGAAGAAACAGAGAAAATGAAGAGATATATGGCT  149

seq1  CTTATACAGGGCCTGATTAGAACACTCTTTCTCATATCTTGTTTCCCAGT  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTTATACAGGGCCTGAGTAGAACACTCTTTCTCATATCTTGTTTCCCAGT  199

seq1  AGAGACACTTTAAGAAACATTTAATCTTTGATATTAAAATATAAAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTTTAAGAAACATTTAATCTTTGATATTAAAATATAAAATAAT  249

seq1  GTACAAATACATTAGAATCCTTTTCAAATTGATATTTTCCATTTCCCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTACAAATACATTAGAATCCTTTTCAAATTGATATTTTCCATTTCCCTCC  299

seq1  ATCAATTTCTAGGTTTTATTTTATTTCGGAGATAATTAAATTACAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTTCTAGGTTTTATTTTATTTCGGAGATAATTAAATTACAATAAT  349

seq1  TCTCCATTCCTTTTCTCCCACCAATAGCCTCCCAAATATGGGTATTCACT  400
      ||||||||||||||||||||||| ||||||||||||| ||||| ||||||
seq2  TCTCCATTCCTTTTCTCCCACCATTAGCCTCCCAAATTTGGGTTTTCACT  399

seq1  ACCCATCAAATCTACAG-CTTTTTAATCTATTTTTGTATATATCTTAGTA  449
      ||||||| ||||||||| ||||||||||||||||||||||||||||| ||
seq2  ACCCATCTAATCTACAGTCTTTTTAATCTATTTTTGTATATATCTTA-TA  448

seq1  TATGTAATATATATTATGCATACACATTCCTAAGTATAACTTTTTGATTT  499
       |||||| | ||||||||||||||||||||||||||  ||| ||||| ||
seq2  GATGTAACA-ATATTATGCATACACATTCCTAAGTA-GACTATTTGA-TT  495

seq1  TGTGTGGTGTTACTTGTATGTATAAGTTTTGTTCTGAGTATTTGAA  545
       ||||||||  ||| |||||||||   | |||||||||| ||||||
seq2  AGTGTGGTG-AACTAGTATGTATA--GTGTGTTCTGAGT-TTTGAA  537