MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-284C16
Chromosome	2 (Build37)
Map Location	40,664,887 - 40,666,056
singlet/doublet	singlet
Overlap gene	Lrp1b
Upstream gene	LOC100042604, Magmas-ps, LOC666531
Downstream gene	LOC100042629
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100042604 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 385 ESTs, 10 Proteins

name	Magmas-ps (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606732
definition	note : mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction pseudogene pseudo : _no_value

name	LOC666531 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666531
definition	note : eukaryotic translation elongation factor 1 alpha 1 pseudogene pseudo : _no_value

name	Lrp1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94217 MGI:2151136
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042629 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC100042604 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249304 GeneID:100042604
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 385 ESTs, 10 Proteins product : similar to vacuolar H+ ATPase G1 transcript_id : XM_001479550.1

name	Lrp1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16519538 GeneID:94217 MGI:2151136
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein-related protein 1B (deleted in tumors) transcript_id : NM_053011.1

name	LOC100042629 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249306 GeneID:100042629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : hypothetical protein LOC100042629 transcript_id : XM_001479594.1

name	LOC100042604 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249305 GeneID:100042604
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479600.1

name	Lrp1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16519539 GeneID:94217 MGI:2151136
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005041 - low-density lipoprotein receptor activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006897 - endocytosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : low density lipoprotein receptor related protein LRP1B/LRP-DIT product : low density lipoprotein-related protein 1B protein_id : NP_443737.1

name	LOC100042629 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249307 GeneID:100042629
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479644.1

clone name	MSMg01-356C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309D15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-152K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439D11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-495A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-202N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095G01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-139J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-284C16.b	B6Ng01-284C16.g
ACC	GA082938	GA082939
length	739	1,164
definition	B6Ng01-284C16.b	B6Ng01-284C16.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaattcatacattcttagtgtcttgtacaaagatcaagtccaag tggatcaaggacatccacataaaaccagatatgctgaatctaatagaaga gaaagtggaaagatcttcaaaaacattagcacgggtaaaattttcctgaa cagaacaccaagggctctaagttcaattgtagacaaatgggattgcaaag gcaaaagacactgccaataggcaaaacagcaacctacagattaggaaaag attgttacccacctatatccgatgaagggctaatatctaatatatacaaa gaactcaagaagctagattccagagaaccaattaactctatttttaagag atgtatagagctaaacaaagaattctcaactgaggaatcttgaatggctg aaaagcaactaaatatagctgtctcttgtgagactatgccggggcctagc aaacacagaagtggatgctcacagtcagctattggatgggtcacacggcc cccaatggaggaactagaaaaagtacccaaggagctaaagggaactgcaa ccctatatgtggaacaacaatatgaactaaccagtaccccggagttcttg tctctagctgcatatgtatcaaaagatggcctagtcagccatcactggaa agagaggccctttggacttgcaaactttatatgccccagtacaggggaac gccagggccaaaaagggggagtgggtgggtaggggattg	gaattctttaaactttgtaaagaaatgattgcaatgtctttgttttgtct atagtttttatttgtttggttggtatttgataaacagtggtcagtaatat agaaattgctgtgatattcaccaaatatgaaaggcacatggaaaagatat agaaatccttttatatacaatagatagaaacttgtatcttctctgtcact attaaaaccttaaaaattcttcaggagtcagacttttcaatgctaaattt tatttactgtaagatttaatctgcccttagcagctactgtaaaatggatc ctgagtgtgattgctgtggttacagcttctgggttagcaatcattgctca cttaggtggtgatgagcagtcagaaatcttcctggaaatcctattatagt tcactacataggtcacttccatctttcgctgtcaagttgaagatgcttaa agtcaatcccactaattccttctatgtctcagtgcatggttgccttgagt tctatttgacaattgagccatgagttggccttgattggccttgacaatag agtttcaagatcctaaggcttgcactcaagagagggaatattgtctaagt gaaagacagttatttacttctatagaattttctaacatcaattataaagc tgttttgcattgtcagttatttaaatgaactctgtttcatcttctttgca ctatcaacttaatagctgaatgttgtttcacatatttttctttgcatgtg gaaagcaataagccatcacttcgatgagaaataaaatgaaagctattgct tttgtaatattttgtatatttgattgggaaatatatttgtctttgattta ttttcaatatgttagacaatgcgtgagtagaaagacttgtggatactagg tatgaactcatgatcaaattattatcaaaagatttggaattaggaaaaat gccaaaagaaggaattgtatggcgatggtgactcctgttttgtaagaaaa ctattttcttcacaataaaaaaaaatgggtttccataaacaatacttctt acaggagtcatattatatagattatcttggtgtaaggtctacaagcaggt aaaaaatctggtatgaatagtcaagtctctggaagaagcgataaaaacgt acctcaaggaggaa
quality values	Open. Hide. 58 31 26 41 58 34 33 54 62 62 62 38 30 62 62 47 42 62 62 62 62 49 62 62 62 62 62 62 62 56 62 22 19 34 16 22 25 22 26 24 24 44 43 56 56 62 59 59 62 62 59 62 62 59 59 59 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 49 46 54 48 48 54 56 62 56 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 34 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 54 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 58 58 58 58 58 51 41 58 44 58 58 58 58 54 50 54 54 54 54 58 58 58 58 58 51 51 58 54 58 51 51 51 39 51 58 58 54 49 58 39 58 58 49 58 58 58 41 58 58 41 46 49 41 35 58 58 52 51 58 58 58 49 49 43 49 58 50 49 39 36 28 46 58 58 58 58 58 51 39 39 58 58 51 43 44 51 42 50 54 54 50 51 52 52 51 51 47 54 54 37 39 42 53 42 49 52 37 49 39 49 49 44 34 41 54 42 37 46 46 54 38 32 32 54 54 54 41 53 54 54 54 54 32 39 52 54 54 53 40 51 54 51 47 39 27 54 49 49 27 32 31 15	Open. Hide. 62 47 51 44 62 62 62 62 44 62 62 30 43 34 28 28 28 24 30 37 62 59 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 42 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 54 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 39 34 35 23 28 35 41 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 59 56 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 45 58 58 58 58 58 58 58 58 58 58 58 54 47 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 49 54 58 58 58 54 45 47 58 58 54 54 58 54 58 54 45 52 46 58 58 58 54 58 54 58 58 58 58 42 52 58 58 52 58 58 54 54 54 42 58 41 58 54 58 58 50 46 58 58 50 51 58 58 40 46 42 58 58 58 49 47 51 51 58 58 58 58 49 51 58 50 58 58 58 58 58 53 53 50 50 51 58 46 53 53 54 51 50 54 54 58 58 51 51 52 41 49 58 47 33 58 58 51 58 53 52 58 51 52 58 58 50 40 46 51 53 50 51 58 49 51 51 51 58 39 58 58 54 53 40 42 51 50 58 53 53 53 51 51 54 41 39 58 49 42 58 50 37 50 49 44 50 58 54 53 58 58 58 44 42 34 53 53 46 49 52 52 54 51 52 53 34 53 35 41 47 52 36 44 49 51 44 40 30 49 53 52 51 51 40 54 25 40 54 42 38 51 37 54 53 37 30 40 32 53 39 53 54 54 54 38 52 34 54 49 39 45 32 42 53 37 47 38 38 54 40 37 32 37 37 52 30 51 32 25 32 27 53 53 31 45 53 31 32 30 32 32 34 46 22 53 51 47 40 34 51 49 31 32 45 41 49 47 31 53 32 34 34 31 42 39 31 51 46 27 45 19 13 32 33 34 34 51 51 31 51 24 32 31 32 33 46 21 31 33 18 14 23 46 23 45 51 31 29 31 31 30 32 46 41 42 30 37 31 48 42 30 20 20 48 43 29 31 47 47 31 32 30 30 33 29 34 37 34 29 43 28 30 24 27 28 31 36 43 31 37 39 37 25 31 32 32 48 48 32 31 30 27 31 41 31 14 26 17 30 24 19 27 35 25 25 23 20 31 31 31 29 32 31 36 37 17 31 31 23 30 35 31 48 15 10 32 31 24 27 14 31 34 33 44 44 35 20 23 19 48 38 31 38 24 17 13 17 24 22 22 30 43 43 48 32 18 20 23 23 21 39 43 17 4 11 25 22 11 29 14 20 19 27 15 17 31 29 33 21 25 32 17 37 21 14 19 32 31 32 14 38 18 24 7 30 19 5 6 27 19 27 13 24 40 34 27 16 22 21 20 47 47 26 28 27 28 13 7 6 14 10 7 11 30 38 29 30 31 28 31 21 6 18 28 10 15 26 11 16 24 7 22 12 34 14 28 8 19 25 27 24 13 9 7 17 11 2 4 15 6 4 21 11 18 19 10 2 3 1 3 16 4 5 6 4 4 3 2 3 5 9 18 7 16 15 14 3 4 6 11 14 8 5 14 16 8 16 3 3 5 15 4 4 4 6 12 13 26 28 17 28 15 3 6 5 21 7 5 4 7 17 8 17 5 2 1 4 2 3 6 6 4 4 6 7 12 6 5 23 11 8 25 24 5 3 3 5 8 10 25 25 9 13 7 1 1 2 20 21 8 7 1 2 1 4 11 4 22 7 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_40664887_40666056
seq2: B6Ng01-284C16.g_65_1228 (reverse)

seq1  TTCCATCCTCTGAGGTCGTTTTTTATCGCTTTCTTCAGAGACTTGAAATT  50
      |||| |||| ||||||   ||||||||||||  | |||||||||| | | 
seq2  TTCC-TCCT-TGAGGTACGTTTTTATCGCTTCTTCCAGAGACTTG-ACTA  47

seq1  ATCATA-CAGATTTTTTACTTGCCTGGTTAGA-CTTACACCAAGATATTC  98
       ||||| |||||||||||| ||| ||  |||| |||||||||||||| ||
seq2  TTCATACCAGATTTTTTACCTGCTTG--TAGACCTTACACCAAGATAATC  95

seq1  TATATTATTTATGACTCTTGTAAAGAGTATTGTTTATGGGAAACCATTTT  148
      ||||| |  |||||||| |||||  |||||||||||||| || |||||||
seq2  TATATAA--TATGACTCCTGTAAGAAGTATTGTTTATGGAAACCCATTTT  143

seq1  TTTTTATTGTGAAGAAAATAGTTTTCTTACAAAACAGGAGTCACCATCGC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTTTATTGTGAAGAAAATAGTTTTCTTACAAAACAGGAGTCACCATCG-  192

seq1  CCATACAATTCCTTCTTTTGGCATTTTTCCTAATTCCAAATCTTTTGATA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACAATTCCTTCTTTTGGCATTTTTCCTAATTCCAAATCTTTTGATA  242

seq1  ATAATTTGATCATGAGTTCATACCTAGTATCCACAAGTCTTTCTACTCAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTGATCATGAGTTCATACCTAGTATCCACAAGTCTTTCTACTCAC  292

seq1  GCATTGTCTAACATATTGAAAATAAATCAAAGACAAATATATTTCCCAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTCTAACATATTGAAAATAAATCAAAGACAAATATATTTCCCAAT  342

seq1  CAAATATACAAAATATTACAAAAGCAATAGCTTTCATTTTATTTCTCATC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATACAAAATATTACAAAAGCAATAGCTTTCATTTTATTTCTCATC  392

seq1  GAAGTGATGGCTTATTGCTTTCCACATGCAAAGAAAAATATGTGAAACAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGATGGCTTATTGCTTTCCACATGCAAAGAAAAATATGTGAAACAA  442

seq1  CATTCAGCTATTAAGTTGATAGTGCAAAGAAGATGAAACAGAGTTCATTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGCTATTAAGTTGATAGTGCAAAGAAGATGAAACAGAGTTCATTT  492

seq1  AAATAACTGACAATGCAAAACAGCTTTATAATTGATGTTAGAAAATTCTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACTGACAATGCAAAACAGCTTTATAATTGATGTTAGAAAATTCTA  542

seq1  TAGAAGTAAATAACTGTCTTTCACTTAGACAATATTCCCTCTCTTGAGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTAAATAACTGTCTTTCACTTAGACAATATTCCCTCTCTTGAGTG  592

seq1  CAAGCCTTAGGATCTTGAAACTCTATTGTCAAGGCCAATCAAGGCCAACT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCTTAGGATCTTGAAACTCTATTGTCAAGGCCAATCAAGGCCAACT  642

seq1  CATGGCTCAATTGTCAAATAGAACTCAAGGCAACCATGCACTGAGACATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTCAATTGTCAAATAGAACTCAAGGCAACCATGCACTGAGACATA  692

seq1  GAAGGAATTAGTGGGATTGACTTTAAGCATCTTCAACTTGACAGCGAAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAATTAGTGGGATTGACTTTAAGCATCTTCAACTTGACAGCGAAAG  742

seq1  ATGGAAGTGACCTATGTAGTGAACTATAATAGGATTTCCAGGAAGATTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGTGACCTATGTAGTGAACTATAATAGGATTTCCAGGAAGATTTC  792

seq1  TGACTGCTCATCACCACCTAAGTGAGCAATGATTGCTAACCCAGAAGCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCTCATCACCACCTAAGTGAGCAATGATTGCTAACCCAGAAGCTG  842

seq1  TAACCACAGCAATCACACTCAGGATCCATTTTACAGTAGCTGCTAAGGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCACAGCAATCACACTCAGGATCCATTTTACAGTAGCTGCTAAGGGC  892

seq1  AGATTAAATCTTACAGTAAATAAAATTTAGCATTGAAAAGTCTGACTCCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAATCTTACAGTAAATAAAATTTAGCATTGAAAAGTCTGACTCCT  942

seq1  GAAGAATTTTTAAGGTTTTAATAGTGACAGAGAAGATACAAGTTTCTATC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTTTTAAGGTTTTAATAGTGACAGAGAAGATACAAGTTTCTATC  992

seq1  TATTGTATATAAAAGGATTTCTATATCTTTTCCATGTGCCTTTCATATTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTATATAAAAGGATTTCTATATCTTTTCCATGTGCCTTTCATATTT  1042

seq1  GGTGAATATCACAGCAATTTCTATATTACTGACCACTGTTTATCAAATAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATATCACAGCAATTTCTATATTACTGACCACTGTTTATCAAATAC  1092

seq1  CAACCAAACAAATAAAAACTATAGACAAAACAAAGACATTGCAATCATTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAACAAATAAAAACTATAGACAAAACAAAGACATTGCAATCATTT  1142

seq1  CTTTACAAAGTTTAAAGAATTC  1170
      ||||||||||||||||||||||
seq2  CTTTACAAAGTTTAAAGAATTC  1164

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information