BAC Information

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BAC

Clone NameB6Ng01-284E04
Chromosome2 (Build37)
Map Location 78,032,846 - 78,033,988
singlet/doubletsinglet
Overlap geneLOC667920
Upstream geneSestd1, LOC623706, LOC667906, Zfp533, BC003993
Downstream geneOTTMUSG00000016703, LOC383717, LOC100040476, LOC100040494, 4930401B11Rik, Ube2e3, LOC100040526
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284E04.bB6Ng01-284E04.g
ACCGA083008GA083009
length1,1261,116
definitionB6Ng01-284E04.b B6Ng01-284E04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgcctggaaaattatagtctcactatgcacccaggttgtttta
aagctgtggtccctctagataccgtattcttcctatctcagtaccccacc
ccctactgttgagtttataggtatgcactaccaggcttagctcagattat
gtttctaacttgaccagtgagcaacacgttagcagccattgaaaatagct
atgctctcaattatgggctaaaaatggaaggctatcaccttgtacatgtt
gaaggcacaactaccacagagtagagttataggagaccaggcacatttgt
ggcaatctaaattgttctagaaagctgatattttgactccctttccaaaa
ctgtgtttccaattaatctaatattttttttaaatgactttgttttgcat
gcttgaatttttttcctagactttttttttttacaatatcctctagtatt
tttaaaattaattcaaatacacaagttacacagagactactttagtgact
tttctccttgctgtgacaaaacacttgaccaagaaaatgaaagaaaacga
acagtttggttcatcattcaagaagatagagtgcagtctatcctgaccat
ggcaggaagtctggcagcagatggacacatccagagttgggaagtcacac
agcatccacagccaggaaacaggataatttctgctgatgcttagtatgtt
ttctctttttttaattcagtgataaatcacacggatttatgctgcccaca
tttaggctggatttttctacctcagttaacctaatctaggaatgctgtca
tagaacaaccagtcatcttctagctaattacagatcctgtcaagtctaca
aacaattttacccatcacaccctttagtaactaaaattgttgcactacaa
agaattgcaaaggaaaaacagtgcagacttgaaggcatcaaacctcagga
actcaaccttgtacctattctatgtctattgatttccttctgcttttgat
gctgtgataatagaaaagagacagagacagccacaaccaagtgtgtcact
actgacatgtgtcatgaacttctcctgtctgctctggctgatgctagcat
gactcagtatgttttacctcactaag
gaattctgagctaaaaaccttctggccttgttttgttgttgttgttgttg
ttgttttttgttttttgggagatgttaatgagtgcttctattttcttagg
gattttaggactatttaaatagtttaactgatcttgatatgactttggta
agtggcatctgcctagaaaatcatccatttcatttagatttttcaattct
gtggaggataggcttttgaagtaacacgtaataattttttgaatttcctc
agtgtctgttgccaagtttcccttttcatttctgattttgttacttcgga
ttctgtctctctgcctttaagttagttagtttggcgaagggtttgtctga
cttgttgattttctcaaagaaccatttctttttttgttgattctttgtat
tgttctctttgtttttaattgattgatttcagctcagggttcgattattt
cctgccatctacatctcgtgggtgtatttgctttttttcctagagttttc
agttatgcttttaaattgttagtatgagaacttttcaattctttatgaag
gtacttagtgctctgaactttcctcttagccctgctttcattgtgttcca
taagttagggtatgtatgcctttatttccattgacttctagaaagtcttt
aattcctttatttcatttcttccctgacccagtgttcattgattagagag
ttgttcagtttccatgaatatgtaggttttatgttgtttctgttgttttt
gaagttcagctttaaatccatgatggtctgataggatacaagttttgctg
gatatagaaatctgggcagggtatctgtgatttttttttttcatttccaa
aattttttaaaaattaggtatttttcgttcatttacatttcaaatactat
cccaaaagtcccctataccctttccctcccaccccttccctaccatccac
tcccacttcttggccctgggcattcccctgtactgacacattataaagtt
tgcaggaccaaagggtctctctcccatgaaatcaaggaaacaacaccctt
cacagtagttccgattatatattactggccgtgactcttaactaaggaag
tgaagaacttcgtgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_78032846_78033988
seq2: B6Ng01-284E04.b_45_1170 (reverse)

seq1  CTTAGTGA-GTAAAACATACTGAGTCCATGCTAGCAATTCAGCCAGGAGC  49
      |||||||| |||||||||||||||| ||||||||||  ||||||| ||||
seq2  CTTAGTGAGGTAAAACATACTGAGT-CATGCTAGCA--TCAGCCA-GAGC  46

seq1  AAGACAGAAGGAAAGTTCATGGACACCATGTCCAGTAGGTGACACACCTT  99
       |||||| ||  |||||||| |||| ||||| ||||| |||||||||  |
seq2  -AGACAGGAG--AAGTTCAT-GACA-CATGT-CAGTA-GTGACACAC--T  87

seq1  GGGTTGTGGCTTGTCTCTTGTCTCTTTTTCTATTATCACAGCATCAAAAA  149
       ||||||||| |||||| |||||| |||||||||||||||||||| ||||
seq2  TGGTTGTGGC-TGTCTC-TGTCTC-TTTTCTATTATCACAGCATC-AAAA  133

seq1  GCAGAAGGAAATCAAATAGACATAGAATAGGTACAAGGTTGAGTTCCTGA  199
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGGAAATC-AATAGACATAGAATAGGTACAAGGTTGAGTTCCTGA  182

seq1  GGTTTGATGCCTTCAAGTCTGCACTGTTTTTCCTTTGCAATTCTTTGTAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGATGCCTTCAAGTCTGCACTGTTTTTCCTTTGCAATTCTTTGTAG  232

seq1  TGCAACAATTTTAGTTACTAAAGGGTGTGATGGGTAAAATTGTTTGTAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACAATTTTAGTTACTAAAGGGTGTGATGGGTAAAATTGTTTGTAGA  282

seq1  CTTGACAGGATCTGTAATTAGCTAGAAGATGACTGGTTGTTCTATGACAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAGGATCTGTAATTAGCTAGAAGATGACTGGTTGTTCTATGACAG  332

seq1  CATTCCTAGATTAGGTTAACTGAGGTAGAAAAATCCAGCCTAAATGTGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTAGATTAGGTTAACTGAGGTAGAAAAATCCAGCCTAAATGTGGG  382

seq1  CAGCATAAATCCGTGTGATTTATCACTGAATTAAAAAAAGAGAAAACATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATAAATCCGTGTGATTTATCACTGAATTAAAAAAAGAGAAAACATA  432

seq1  CTAAGCATCAGCAGAAATTATCCTGTTTCCTGGCTGTGGATGCTGTGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCATCAGCAGAAATTATCCTGTTTCCTGGCTGTGGATGCTGTGTGA  482

seq1  CTTCCCAACTCTGGATGTGTCCATCTGCTGCCAGACTTCCTGCCATGGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAACTCTGGATGTGTCCATCTGCTGCCAGACTTCCTGCCATGGTC  532

seq1  AGGATAGACTGCACTCTATCTTCTTGAATGATGAACCAAACTGTTCGTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAGACTGCACTCTATCTTCTTGAATGATGAACCAAACTGTTCGTTT  582

seq1  TCTTTCATTTTCTTGGTCAAGTGTTTTGTCACAGCAAGGAGAAAAGTCAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATTTTCTTGGTCAAGTGTTTTGTCACAGCAAGGAGAAAAGTCAC  632

seq1  TAAAGTAGTCTCTGTGTAACTTGTGTATTTGAATTAATTTTAAAAATACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAGTCTCTGTGTAACTTGTGTATTTGAATTAATTTTAAAAATACT  682

seq1  AGAGGATATTGTAAAAAAAAAAAGTCTAGGAAAAAAATTCAAGCATGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATATTGTAAAAAAAAAAAGTCTAGGAAAAAAATTCAAGCATGCAA  732

seq1  AACAAAGTCATTTAAAAAAAATATTAGATTAATTGGAAACACAGTTTTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTCATTTAAAAAAAATATTAGATTAATTGGAAACACAGTTTTGG  782

seq1  AAAGGGAGTCAAAATATCAGCTTTCTAGAACAATTTAGATTGCCACAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAGTCAAAATATCAGCTTTCTAGAACAATTTAGATTGCCACAAAT  832

seq1  GTGCCTGGTCTCCTATAACTCTACTCTGTGGTAGTTGTGCCTTCAACATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGTCTCCTATAACTCTACTCTGTGGTAGTTGTGCCTTCAACATG  882

seq1  TACAAGGTGATAGCCTTCCATTTTTAGCCCATAATTGAGAGCATAGCTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGTGATAGCCTTCCATTTTTAGCCCATAATTGAGAGCATAGCTAT  932

seq1  TTTCAATGGCTGCTAACGTGTTGCTCACTGGTCAAGTTAGAAACATAATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATGGCTGCTAACGTGTTGCTCACTGGTCAAGTTAGAAACATAATC  982

seq1  TGAGCTAAGCCTGGTAGTGCATACCTATAAACTCAACAGTAGGGGGTGGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTAAGCCTGGTAGTGCATACCTATAAACTCAACAGTAGGGGGTGGG  1032

seq1  GTACTGAGATAGGAAGAATACGGTATCTAGAGGGACCACAGCTTTAAAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAGATAGGAAGAATACGGTATCTAGAGGGACCACAGCTTTAAAAC  1082

seq1  AACCTGGGTGCATAGTGAGACTATAATTTTCCAGGCAGGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGGTGCATAGTGAGACTATAATTTTCCAGGCAGGAATTC  1126