BAC Information

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BAC

Clone NameB6Ng01-284F22
Chromosome2 (Build37)
Map Location 174,280,569 - 174,417,515
singlet/doubletdoublet
Overlap geneTubb1, Atp5e, Slmo2, LOC664967
Upstream gene1700021F07Rik, 1700030G11Rik, LOC100043911, Rab22a, 1700010B08Rik, Vapb, LOC620189, LOC664880, LOC100043912, LOC664901, Stx16, Npepl1, Nespas, Gnas, Th1l, Ctsz, Rpl30-ps5
Downstream geneLOC100043757, Edn3, LOC545487, LOC100043760, LOC100043761, LOC620790, LOC665001, LOC100043762, LOC100043763, LOC100043764, LOC100043914, LOC100043915, LOC668009, LOC100038953
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284F22.bB6Ng01-284F22.g
ACCGA083090GA083091
length1,167888
definitionB6Ng01-284F22.b B6Ng01-284F22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(174,416,330 - 174,417,515)(174,280,569 - 174,281,453)
sequence
gaattcttactttctacaaaacttaattcaaaacagagttaaactgtaag
aattttagaggaatttaagaattaagaagaaagctttgaggtttaggttt
aaagataggagaagtaccatgcagacactggtccagaccatgatgatcat
gagtgtggcatcatgagcaaactgcaagaagacaatgcctacattgaatc
cagaagtggggaacaaaacagcttgcttttcctgtcagtgttattgtctg
ttacttgtggatcagtgaccttaattggaatgtagatgttactgaagaca
ctgaagaccaacaactgtagcaagaataactcaccaaatttgggacactt
gctctgagtataactttacctctattaacaggaacaagagggacaaactg
atgggttctcaggacaccggtggaacacaagtttgtgcttcttgccacga
ggcaagtgaagaattctaacttagatttgagtgcagttgtaggatttctt
gaagcaaaagccatcatgttgtttggaaatgtagcgatgaggagaatcaa
ggcatttggccacaatcatgtggcttaaaatcacctgtgtaggcctctgt
tgagatccagtgaaggttggagagaaattatggacaaacagaacaacatt
ggccacagtcccaaccccaaactggcaaagcaagaggagctgaagagcca
cttcctcagtggttttccaggatttatcatgagcagacatggaaaaggct
tcgttcgaccctggagtgatgactaggtgggacactactgacctccagtc
tctgttctattatccacgcttaccaattgatttgagaaaatttcttctct
tgataaataagacactattctatcacactacaggagctttgcctggagaa
cgatgtatggatagtaagttagaataaaatttttatactttattgaatta
aaaaagaaagatatataaaaaaaacttcttgaaaacttaccagttaaaac
acgcattacccagagatgatcataattgtagtcatatctttaccaccagg
atacccactaaactgcagtaagatcggctgcaatctgagtactgggaagt
taagcagaagaagacctagctgaggctacctggatcgagccgattgacct
agccaggatacacaaga
gaattcagtctgtcctcatttcctaagatcagcacttctccagctcaggc
tgtgggaaggtgaaatttgagctccctcatccgaagtgagattctaaaaa
ggactcggaaccttctaacatttctaaggaaccggagttaatggcaaaat
ccaatgtaatgttctatgtgcttgacatttcacttcgtagggttctagcg
cagccttcttagtcacacatagtggaggtaagaagagaagagggaggagg
actcatgcgtggggcagggtcaggcagcccccagggcacctatgcacagg
agccaactcaccatttcatttacttttcttcttactatatttatttattt
atttatttatgtgcatgcacatgcaagagtgtgtacacatgctgtggtgg
tgtaagtgtggtggtcagaggacaatttggggtagttggttctctccttc
caccatgtggggggtcacagggatcgaactcaggtggtcagcctgggtgg
caagcacctttcctggctgagctgccgagccacaggatggctcttctcct
cccaggactgcgaactgactttactctttctgcctacagttctgggaggt
gatcggggaagaacatgggattgactgcgctgggagctactgtgggacgt
ctgctctccagctggagaggatcagcgtttactacaacgaagcctacggt
agggctgcctgctgggtgagctctggcctgtcatctgggcggcgtgggca
gagaagatgaccctagtgtgaaagaatggagtcccagcatgaacgggcag
gcatgcagggttttggagtctgggatggcgagtggccccactccagtttg
caagggtcgggatgaggtgcattcaagccttgtgtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_174416330_174417515
seq2: B6Ng01-284F22.b_48_1214 (reverse)

seq1  TCTTGTGTATCCCTGGCTAGTCTAAAACTCGCTCTGTATCCCAGCGTAGC  50
      |||||||||| |||||||||   ||   |||  ||  || |||| |||||
seq2  TCTTGTGTAT-CCTGGCTAGGTCAA---TCG-GCTCGAT-CCAG-GTAGC  43

seq1  CTCAAGCTTGGGTCTCTCTTCTTGCCTTAACCTCCCAAGTACTCAGATTG  100
      ||| ||| | ||||| ||||||   |||||| |||| |||||||||||||
seq2  CTC-AGC-TAGGTCT-TCTTCT--GCTTAACTTCCC-AGTACTCAGATTG  87

seq1  CAGCCCGAATCTTTACTGCAGTTTTAAGTTGGGTATTCTGTTGGTAAAGA  150
      |||||   ||| ||||||||||||  || ||||||| ||| |||||||||
seq2  CAGCC--GATC-TTACTGCAGTTT--AG-TGGGTATCCTGGTGGTAAAGA  131

seq1  TATTGACTACCAATTTATGATCATCTCTGGGTAATGCGTGTTTTTACTGG  200
      || |||||||  | |||||||||||||||||||||||||||||| |||||
seq2  TA-TGACTAC--AATTATGATCATCTCTGGGTAATGCGTGTTTTAACTGG  178

seq1  TAAGTTTTCA--GAGTTTTTTTTATATATTCTTTCTTTTTTAATTCAAT-  247
      ||||||||||   ||||||||||||||| |||||||||||||||||||| 
seq2  TAAGTTTTCAAGAAGTTTTTTTTATATA-TCTTTCTTTTTTAATTCAATA  227

seq1  AAGTAT-AAAATTTTATTCTAACTTACTATCCATACATCGTTCTCCAGGC  296
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAAAAATTTTATTCTAACTTACTATCCATACATCGTTCTCCAGGC  277

seq1  AAAGCTCCTGTAGTGTGATAGAATAGTGTCTTATTTATCAAGAGAAGAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCCTGTAGTGTGATAGAATAGTGTCTTATTTATCAAGAGAAGAAA  327

seq1  TTTTCTCAAATCAATTGGTAAGCGTGGATAATAGAACAGAGACTGGAGGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAAATCAATTGGTAAGCGTGGATAATAGAACAGAGACTGGAGGT  377

seq1  CAGTAGTGTCCCACCTAGTCATCACTCCAGGGTCGAACGAAGCCTTTTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTGTCCCACCTAGTCATCACTCCAGGGTCGAACGAAGCCTTTTCC  427

seq1  ATGTCTGCTCATGATAAATCCTGGAAAACCACTGAGGAAGTGGCTCTTCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCTCATGATAAATCCTGGAAAACCACTGAGGAAGTGGCTCTTCA  477

seq1  GCTCCTCTTGCTTTGCCAGTTTGGGGTTGGGACTGTGGCCAATGTTGTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTCTTGCTTTGCCAGTTTGGGGTTGGGACTGTGGCCAATGTTGTTC  527

seq1  TGTTTGTCCATAATTTCTCTCCAACCTTCACTGGATCTCAACAGAGGCCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTCCATAATTTCTCTCCAACCTTCACTGGATCTCAACAGAGGCCT  577

seq1  ACACAGGTGATTTTAAGCCACATGATTGTGGCCAAATGCCTTGATTCTCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTGATTTTAAGCCACATGATTGTGGCCAAATGCCTTGATTCTCC  627

seq1  TCATCGCTACATTTCCAAACAACATGATGGCTTTTGCTTCAAGAAATCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGCTACATTTCCAAACAACATGATGGCTTTTGCTTCAAGAAATCCT  677

seq1  ACAACTGCACTCAAATCTAAGTTAGAATTCTTCACTTGCCTCGTGGCAAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGCACTCAAATCTAAGTTAGAATTCTTCACTTGCCTCGTGGCAAG  727

seq1  AAGCACAAACTTGTGTTCCACCGGTGTCCTGAGAACCCATCAGTTTGTCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAAACTTGTGTTCCACCGGTGTCCTGAGAACCCATCAGTTTGTCC  777

seq1  CTCTTGTTCCTGTTAATAGAGGTAAAGTTATACTCAGAGCAAGTGTCCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTTCCTGTTAATAGAGGTAAAGTTATACTCAGAGCAAGTGTCCCA  827

seq1  AATTTGGTGAGTTATTCTTGCTACAGTTGTTGGTCTTCAGTGTCTTCAGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGTGAGTTATTCTTGCTACAGTTGTTGGTCTTCAGTGTCTTCAGT  877

seq1  AACATCTACATTCCAATTAAGGTCACTGATCCACAAGTAACAGACAATAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTACATTCCAATTAAGGTCACTGATCCACAAGTAACAGACAATAA  927

seq1  CACTGACAGGAAAAGCAAGCTGTTTTGTTCCCCACTTCTGGATTCAATGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACAGGAAAAGCAAGCTGTTTTGTTCCCCACTTCTGGATTCAATGT  977

seq1  AGGCATTGTCTTCTTGCAGTTTGCTCATGATGCCACACTCATGATCATCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTGTCTTCTTGCAGTTTGCTCATGATGCCACACTCATGATCATCA  1027

seq1  TGGTCTGGACCAGTGTCTGCATGGTACTTCTCCTATCTTTAAACCTAAAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGGACCAGTGTCTGCATGGTACTTCTCCTATCTTTAAACCTAAAC  1077

seq1  CTCAAAGCTTTCTTCTTAATTCTTAAATTCCTCTAAAATTCTTACAGTTT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGCTTTCTTCTTAATTCTTAAATTCCTCTAAAATTCTTACAGTTT  1127

seq1  AACTCTGTTTTGAATTAAGTTTTGTAGAAAGTAAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTTTTGAATTAAGTTTTGTAGAAAGTAAGAATTC  1167

seq1: chr2_174280569_174281453
seq2: B6Ng01-284F22.g_67_954

seq1  GAATTCAGTCTGTCCTCATTTCCTAAGATCAGCACTTCTCCAGCTCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTGTCCTCATTTCCTAAGATCAGCACTTCTCCAGCTCAGGC  50

seq1  TGTGGGAAGGTGAAATTTGAGCTCCCTCATCCGAAGTGAGATTCTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAAGGTGAAATTTGAGCTCCCTCATCCGAAGTGAGATTCTAAAAA  100

seq1  GGACTCGGAACCTTCTAACATTTCTAAGGAACCGGAGTTAATGGCAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCGGAACCTTCTAACATTTCTAAGGAACCGGAGTTAATGGCAAAAT  150

seq1  CCAATGTAATGTTCTATGTGCTTGACATTTCACTTCGTAGGGTTCTAGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTAATGTTCTATGTGCTTGACATTTCACTTCGTAGGGTTCTAGCG  200

seq1  CAGCCTTCTTAGTCACACATAGTGGAGGTAAGAAGAGAAGAGGGAGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTCTTAGTCACACATAGTGGAGGTAAGAAGAGAAGAGGGAGGAGG  250

seq1  ACTCATGCGTGGGGCAGGGTCAGGCAGCCCCCAGGGCACCTATGCACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGCGTGGGGCAGGGTCAGGCAGCCCCCAGGGCACCTATGCACAGG  300

seq1  AGCCAACTCACCATTTCATTTACTTTTCTTCTTACTATATTTATTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACTCACCATTTCATTTACTTTTCTTCTTACTATATTTATTTATTT  350

seq1  ATTTATTTATGTGCATGCACATGCAAGAGTGTGTACACATGCTGTGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATGTGCATGCACATGCAAGAGTGTGTACACATGCTGTGGTGG  400

seq1  TGTAAGTGTGGTGGTCAGAGGACAATTTGGGGTAGTTGGTTCTCTCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTGTGGTGGTCAGAGGACAATTTGGGGTAGTTGGTTCTCTCCTTC  450

seq1  CACCATGTGGGGGGTCACAGGGATCGAACTCAGGTGGTCAGCCTGGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGTGGGGGGTCACAGGGATCGAACTCAGGTGGTCAGCCTGGGTGG  500

seq1  CAAGCACCTTTCCTGGCTGAGCTGCCGAGCCACAGGATGGCTCTTCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACCTTTCCTGGCTGAGCTGCCGAGCCACAGGATGGCTCTTCTCCT  550

seq1  CCCAGGACTGCGAACTGACTTTACTCTTTCTGCCTACAGTTCTGGGAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGACTGCGAACTGACTTTACTCTTTCTGCCTACAGTTCTGGGAGGT  600

seq1  GATCGGGGAAGAACATGGGATTGACTGCGCTGGGAGCTACTGTGGGACGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGGGGAAGAACATGGGATTGACTGCGCTGGGAGCTACTGTGGGACGT  650

seq1  CTGCTCTCCAGCTGGAGAGGATCAGCGTTTACTACAACGAAGCCTACGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCCAGCTGGAGAGGATCAGCGTTTACTACAACGAAGCCTACGGT  700

seq1  AGGGCTGCCTGCTGGGTGAGCTCTGGCCTGTCATCTGGGCGGCGTGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGCCTGCTGGGTGAGCTCTGGCCTGTCATCTGGGCGGCGTGGGCA  750

seq1  GAGAAGATGACCCTAGTGTGAAAGAATGGAGTCCCAGCATGGAACGGGCA  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGAAGATGACCCTAGTGTGAAAGAATGGAGTCCCAGCAT-GAACGGGCA  799

seq1  GGCATGCAGGGTTTTGGAGTCT-GGATGGCGAGTGG-CCCACTCCAG-TT  847
      |||||||||||||||||||||| ||||||||||||| |||||||||| ||
seq2  GGCATGCAGGGTTTTGGAGTCTGGGATGGCGAGTGGCCCCACTCCAGTTT  849

seq1  GCAAGGGTCGGGATGAGGTGCATTC-AGCCTTGTGTCAG  885
      ||||||||||||||||||||||||| |||||||||||||
seq2  GCAAGGGTCGGGATGAGGTGCATTCAAGCCTTGTGTCAG  888