BAC Information

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BAC

Clone NameB6Ng01-285P06
Chromosome2 (Build37)
Map Location 31,429,773 - 31,430,048
singlet/doubletsinglet
Overlap geneFubp3
Upstream geneCstad, EG665645, 1700001O22Rik, 2610205E22Rik, Asb6, Prrx2, Ptges, Ppia-ps2_387.1, Tor1b, Tor1a, BC005624, Usp20, Fnbp1, Gpr107, Freq, LOC622345, LOC670182, LOC665700, BC034076, Ass1
Downstream geneLOC100041465, Prdm12, Exosc2, Abl1, BC094274, Fibcd1, Lamc3, 2810003C17Rik, Nup214, A130092J06Rik, LOC100040058, Ppapdc3, 5830434P21Rik, Pomt1, Uck1, LOC622534, 2900010J23Rik, Golga2, Dnm1, Ciz1, 1110008P14Rik, Lcn2, Ptges2, LOC100041671, Slc25a25, 4933440H19Rik, C230093N12Rik, Dpm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285P06.bB6Ng01-285P06.g
ACCGA084271GA084272
length458276
definitionB6Ng01-285P06.b B6Ng01-285P06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caggacagctagggtttcagaaagagatcatatctcaaaacaaaacaaaa
caatctaaagctgagataaaacattatgagctaagcatcaattgaagagg
gatgagcgtatatccactcatgaactgtgtatgaatgttcacagtagccc
tagtcaccaaggccccgatgcccatcaggtagcaagtgagtaatcaaaag
tgtacctcactaatggaataaacttcaagagcaagaaggagtgaggtgct
gatgcatatgctactatggatgacctccagaagcatgatgatgggctggg
gagctcactcagtacagtgcttgctacacatcaggagaactcagttctag
ccccacaccctcatacaaagccagatgtggcagcatgcactggggagatg
gagacaggattgcctagaggactgatgggtgagctccaagtacggggtgg
gggtgggg
actctgtagaccaggctggcctcagactcggacatctgtttctgcctcct
gagtattggggggttggaggctttttgcactgctacccagcttatgagaa
ttatttatttattttccaagcagagtttatttttgtaaccctcgctgtct
tggagctagctctgtagatcaggctaaccttgaactctcagggatccacc
tgcctctgcctgcctctgccatcctagtgaagttttaaggattgctgaga
cttgcttggggaggtgggggtggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_31429773_31430048
seq2: B6Ng01-285P06.g_74_349

seq1  ACTCTGTAGACCAGGCTGGCCTCAGACTCGGACATCTGTTTCTGCCTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGACCAGGCTGGCCTCAGACTCGGACATCTGTTTCTGCCTCCT  50

seq1  GAGTATTGGGGGGTTGGAGGCTTTTTGCACTGCTACCCAGCTTATGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTGGGGGGTTGGAGGCTTTTTGCACTGCTACCCAGCTTATGAGAA  100

seq1  TTATTTATTTATTTTCCAAGCAGAGTTTATTTTTGTAACCCTCGCTGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTTTCCAAGCAGAGTTTATTTTTGTAACCCTCGCTGTCT  150

seq1  TGGAGCTAGCTCTGTAGATCAGGCTAACCTTGAACTCTCAGGGATCCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCTAGCTCTGTAGATCAGGCTAACCTTGAACTCTCAGGGATCCACC  200

seq1  TGCCTCTGCCTGCCTCTGCCATCCTAGTGAAGTTTTAAGGATTGCTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGCCTGCCTCTGCCATCCTAGTGAAGTTTTAAGGATTGCTGAGA  250

seq1  CTTGCTTGGGGAGGTGGGGGTGGAGA  276
      ||||||||||||||||||||||||||
seq2  CTTGCTTGGGGAGGTGGGGGTGGAGA  276