BAC Information

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BAC

Clone NameB6Ng01-293E02
Chromosome2 (Build37)
Map Location 86,354,716 - 86,355,244
singlet/doubletsinglet
Overlap genenone
Upstream gene4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076
Downstream geneLOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293E02.bB6Ng01-293E02.g
ACCGA089682GA089683
length1,1451,174
definitionB6Ng01-293E02.b B6Ng01-293E02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttccattgataaacctgcctggctctttatcaatatcataca
attttttgtcactattgctctatagtacagtttgaagtcagggatgttga
ttccccagaaattcttttattgttgaaaataatttttgctatcctgggtt
ttttgttattccaaatgaatttgagaattgctttctctaactctacaaag
aattgatttggaatttcatttgagactatactgaatctgtagattttttt
ttccggcaagatggcaaatttactacattaatcctgccaatctatggagc
atgggagatttttccatcttctaaggtcttcttcaatttctttcttcaga
gttttaaattgatgtcgtacagatcttttacttctttggttagagacaaa
tcaagatattttatgttgtttgtgactattttgaatgtcatcctttccct
aatttcttcctcagcccttttatcctctgcatgtaagaagatgacaggct
tgttttagttaatattttatccagccactttgctgaagttgtttatcagc
ttaggagttctctggtggaatttttgtggtcatttaagtatactatcata
ttatctgcaaatagtcatattttgacttctaccttttcattttgtatcaa
tttgacttccttttgttgtctaattggtctagctagaacttcaagtacta
tattgagtagatagggagagagagggcagtcttgtctagtccccgatttt
agtgggaatgcttcaagtttctctccaattattttgatgcagttactggt
tttctatatattgcttttactatgtttgggtatgggccttgaattcctga
tcattctaagacttttaacatgaaaggatgttgaattttgtcaaatgaat
tttaagcatctactaaattgatcatgtggttttttttctttgaggttatg
tagtgaattatgttgatgtattccatatatagaatatatattccagatat
atccctgcatccctggtgtgaagcctacttgatcatggtgatgaacattt
gatgtgtatgcctccgtacctcattattatagatgcttcattcataacca
attaggttaatgaccatgttttaatataacatggtataccttata
gaattcttttcttcttaaaagattgttgctcgctcttttgcaatattttg
tgattgagccttagatgcaagatttgttttggaggtttaaggtctagaac
tagggtccaaaatcctgccattagattgattgtaggtttctgtaatgctc
accgttgattgcaaataatatttttatgagatgtgtggattacaaatatc
tgtgggtataaagccacatatgtagaaggatcgaagtatctacactttag
tcttcctgcttctttagtttcatgtgttttgcaaattgtatcttgggtat
tctgagcttctgggctagtatccacttatcagtgagtgcatatcatgtgt
gttcttttgtaattgggtaaccttacttaggatgatatccaaccattagt
ctaagaatttcaaattcattgtttttagtagctgtgtagtactccattgt
ataaatgtacctcattttctgtatccatttctctgttgaaggacatctag
gttctttcaggcttctagctataataaataatgctgctatgaacacagtg
gagcatgtgtccttattacatattggagaatcttctgggtatatgcacag
gagtggtattgctggaacttcccatattactatgtccaattatctaagga
accgtcaaactgattttcagagtggttgtaccagcttgcaatacaaccag
caatggaggagtgttcctctttctccacatcctcaccagcatctgatgtc
atgtgaatttttgatctttgccattctgactggcatgaggtagaatctca
ggactgttttaatttgcatttccctgatgacttagggctttgaacatttt
ttaggtgtttctcagtcatttggtatttcctcagttgagaattcctttgt
ttagttctgtgcccgcattatttaataaggttattttgttttctgggagt
ccaacttatttgagttctttgtaatataattgaataaatagcccttctat
ctgattttaggactggataaagatattttccaatctgtggtagccctttt
tttatctttattgaacgtgttcccttgcttacagaggctttgcattttta
gttgtcccaatgtttatattggatcttacagcacaggccattatggtttc
gtgtctaggaatttttctcacccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86354716_86355244
seq2: B6Ng01-293E02.b_675_1189

seq1  ACCTTTTCATTTTGTATCAATTTGACTTCCTTTTGTTGTCTAATTGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTCATTTTGTATCAATTTGACTTCCTTTTGTTGTCTAATTGGTCT  50

seq1  AGCTAGAACTTCAAGTACTATATTGAGTAGATAGGGAGAGAGAGGGCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAACTTCAAGTACTATATTGAGTAGATAGGGAGAGAGAGGGCAGT  100

seq1  CTTGTCTAGTCCCCGATTTTAGTGGGAATGCTTCAAGTTTCTCTCCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTAGTCCCCGATTTTAGTGGGAATGCTTCAAGTTTCTCTCCAATT  150

seq1  ATTTTGATGCAGGTTACTGGTTTTCTATATATTGCTTTTACTATGTTTGG  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATGCA-GTTACTGGTTTTCTATATATTGCTTTTACTATGTTTGG  199

seq1  GTATGGGCCTTGAATTCCTGATCATTCTAAGACTTTTAACATGAAAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGCCTTGAATTCCTGATCATTCTAAGACTTTTAACATGAAAGGAT  249

seq1  GTTGAATTTTGTCAAATGAATTTTAAGCATCTACTAAATTGATCATGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATTTTGTCAAATGAATTTTAAGCATCTACTAAATTGATCATGTGG  299

seq1  TTTTTTTTCTTTGAGGTTATGTAGTGAATTATGTTGATGTATTTCCATAT  350
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTTTTTTCTTTGAGGTTATGTAGTGAATTATGTTGATGTA-TTCCATAT  348

seq1  ATAGAATATATATTCCAGATATATCCCTGCATCCCTGGTGTGAAGCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATATATATTCCAGATATATCCCTGCATCCCTGGTGTGAAGCCTAC  398

seq1  TTGATCATGGTGAATGAACATTTTGATGTGTTATGCCTCCGTACTCCAAT  450
      |||||||||||| ||||||| ||||||||| |||||||||||||  ||  
seq2  TTGATCATGGTG-ATGAACA-TTTGATGTG-TATGCCTCCGTACCTCA--  443

seq1  TAATTATAAGGATTGCTTTTCATTCAATAACCAAAATTAAGTATAATGAA  500
      | ||||||  || |||  ||||||| ||||||  ||||| || |||||| 
seq2  TTATTATA--GA-TGC--TTCATTC-ATAACC--AATTAGGT-TAATGAC  484

seq1  CATGTTTTAATATAACAT-GTATA-CTTATA  529
      |||||||||||||||||| ||||| ||||||
seq2  CATGTTTTAATATAACATGGTATACCTTATA  515