BAC Information

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BAC

Clone NameB6Ng01-293E11
Chromosome2 (Build37)
Map Location 76,418,631 - 76,602,814
singlet/doubletdoublet
Overlap geneOsbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn
Upstream geneLOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1
Downstream gene2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293E11.bB6Ng01-293E11.g
ACCGA089700GA089701
length1,0971,147
definitionB6Ng01-293E11.b B6Ng01-293E11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,418,631 - 76,419,741)(76,601,667 - 76,602,814)
sequence
gaattcactaagtctttgctaactgaaccgatggaggcattctttcaggc
cattcacccacaatgcttctgagaagtgctcacatcaaaatttacctgac
tggggatgtggtagccaccagtccactttttaacaagtcctcagaaccct
ttcagaaaatcgtctactaaaagctatatcatttttttaagatggcctac
ttctttccagaatgatctggtgtctgctttaaaacttgtgtctgcaggga
cgtgcctaatcacttttagaatatagttcctgatttacttttgaaccccg
aagtttagaaccaaaatatttggctccagcacttttagctcacagggaag
acacagaccttggtaacaccccagggtcttgatctgtgtgtaggaccata
tgagaggaccacatcaaacagcccagcccctgttgctgcacacaaacatg
ggacgtgtgtacctctgcctcatgtctacggtcactgcagagttctacag
gaaagataatgtatcacttatgacacagtcgcttaggagaaatcagaaac
tgaagtgtgcttacgcatggctctttccttaataaatgcgaacaacaaac
gagattgcaatatacactcaattccaggaggcacttgtctccttggctgc
aattaagtgagatgaattttagagcagcggttctctgcctgtggctttca
acccctttaggggctgaaccaccctttaataggggtcccatatcagaaat
cctgcatattagatattttacattaagattcataatagtagcaaaattac
agttatgaagtggcaatgacataattttatgagtggaaggtcactacaac
atgaggaactgtatcaaagggatgcagtaacacggaaggctgggaaccac
tattttggagaaattgggtggaagagattgattggcctcttcttccctac
aagctaatgagctcagcttaccacgcctgctggtgtccctctagctctct
gcagcagtgagactgtgagaccaagtagaggggagcacagatagaaaata
ttttatctcattttcatgtttatagacctcaccacacaaaagcaaaa
gaattcacagtcaccagcttggatgagaaccaggagtacgagttcagggt
gtgtgcccagaatcaagttggcattgggcgccctgcagagctaaaggaag
ccatcaaacctaaagaaatcctaggtgaggcccttttgtggtggtagata
gtcatctgcatgcattctcacggtcatgggcttcctcgtgtctcaagagt
cggctgatgtcttttgtgtcgtttgcagagcctccagagattgacttgga
tgccagcatgagaaaactggtcgtagtgagagctggctgccctattcgac
tattcgcaatagtgagaggacgacctgcccccaaagtcacatggcgcaaa
gtgggcattgataatgtggtcagaaaaggacaagtcgatctagttgacac
tatggccttccttgtcatccccaactctacccgtgatgactctggaaaat
actccctgacccttgtgaacccagcaggagaaaaggctgtttttgtgaat
gtcaaagtactaggtgcgttatccaagtgcttttttttttctgcttcaaa
atcaaataagttaataagaatgcttatgggacatatgttctgagtctgtg
gatctttacagatactcctggacctgtggctgatttaaaagtttcagatg
tcactaaaacatcatgtcacgtgtcctgggcacctcctgaaaatgatggt
ggaagccaagtgacacattatattgtggagaaacgtgaggcagaaagaaa
aacatggtcaacagttacccctgaagtgaagaaaacaagctttcaatgta
accaaccttgtccctgggaacgagtatttcttccgagtaactgctgtcaa
tgaatatggccctggtgtcccgacagacatccccaaaccctgtgcttgca
tcagatcctctcagtaaggcaatctccgttcttctcccctttgattgcag
ccctctagttactaaggtcatgagatcagtatgattatattccaccggga
agggacttgattgtgaacctgaaaccccagagtacagtgattatctctcc
tcagaccaaacttaatagttcctccattcttatacttcaatttcacatgt
tggactacatcatatacttggttgcaagtcatactggaaaaactctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76418631_76419741
seq2: B6Ng01-293E11.b_48_1144

seq1  GAATTCACTAAGTCTTTGCTAACTGAACCGATGGAGGCATTCTTTCAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAGTCTTTGCTAACTGAACCGATGGAGGCATTCTTTCAGGC  50

seq1  CATTCACCCACAATGCTTCTGAGAAGTGCTCACATCAAAATTTACCTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACCCACAATGCTTCTGAGAAGTGCTCACATCAAAATTTACCTGAC  100

seq1  TGGGGATGTGGTAGCCACCAGTCCACTTTTTAACAAGTCCTCAGAACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATGTGGTAGCCACCAGTCCACTTTTTAACAAGTCCTCAGAACCCT  150

seq1  TTCAGAAAATCGTCTACTAAAAGCTATATCATTTTTTTAAGATGGCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAATCGTCTACTAAAAGCTATATCATTTTTTTAAGATGGCCTAC  200

seq1  TTCTTTCCAGAATGATCTGGTGTCTGCTTTAAAACTTGTGTCTGCAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCCAGAATGATCTGGTGTCTGCTTTAAAACTTGTGTCTGCAGGGA  250

seq1  CGTGCCTAATCACTTTTAGAATATAGTTCCTGATTTACTTTTGAACCCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCCTAATCACTTTTAGAATATAGTTCCTGATTTACTTTTGAACCCCG  300

seq1  AAGTTTAGAACCAAAATATTTGGCTCCAGCACTTTTAGCTCACAGGGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAGAACCAAAATATTTGGCTCCAGCACTTTTAGCTCACAGGGAAG  350

seq1  ACACAGACCTTGGTAACACCCCAGGGTCTTGATCTGTGTGTAGGACCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACCTTGGTAACACCCCAGGGTCTTGATCTGTGTGTAGGACCATA  400

seq1  TGAGAGGACCACATCAAACAGCCCAGCCCCTGTTGCTGCACACAAACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGACCACATCAAACAGCCCAGCCCCTGTTGCTGCACACAAACATG  450

seq1  GGACGTGTGTACCTCTGCCTCATGTCTACGGTCACTGCAGAGTTCTACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGTGTGTACCTCTGCCTCATGTCTACGGTCACTGCAGAGTTCTACAG  500

seq1  GAAAGATAATGTATCACTTATGACACAGTCGCTTAGGAGAAATCAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATAATGTATCACTTATGACACAGTCGCTTAGGAGAAATCAGAAAC  550

seq1  TGAAGTGTGCTTACGCATGGCTCTTTCCTTAATAAATGCGAACAACAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGTGCTTACGCATGGCTCTTTCCTTAATAAATGCGAACAACAAAC  600

seq1  GAGATTGCAATATACACTCAATTCCAGGAGGCACTTGTCTCCTTGGCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGCAATATACACTCAATTCCAGGAGGCACTTGTCTCCTTGGCTGC  650

seq1  AATTAAGTGAGATGAATTTTAGAGCAGCGGTTCTCTGCCTGTGGCTTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTGAGATGAATTTTAGAGCAGCGGTTCTCTGCCTGTGGCTTTCA  700

seq1  ACCCCTTTAGGGGCTGAACCACCCTTTAATAGGGGTCCCATATCAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTTAGGGGCTGAACCACCCTTTAATAGGGGTCCCATATCAGAAAT  750

seq1  CCTGCATATTAGATATTTTACATTAAGATTCATAATAGTAGCAAAATTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATATTAGATATTTTACATTAAGATTCATAATAGTAGCAAAATTAC  800

seq1  AGTTATGAAGTGGCAATGACATAATTTTATGAGTGGAAGGTCACTACAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGAAGTGGCAATGACATAATTTTATGAGTGGAAGGTCACTACAAC  850

seq1  ATGAGGAACTGTATCAAAGGGATGCAGTAACACGGAAGGCTGGGAACCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAACTGTATCAAAGGGATGCAGTAACACGGAAGGCTGGGAACCAC  900

seq1  TATTTTGGAGAAATTGGGTGGAAGAGATTGATTGGCCTCTTCTTCCCTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGAGAAATTGGGTGGAAGAGATTGATTGGCCTCTTCTTCCCTAC  950

seq1  AAGCTAATGAGCTCAGCTTTACCACGCCTGCTGGTGTCCCTCTAGCTCTC  1000
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAGCTAATGAGCTCAGC-TTACCACGCCTGCTGGTGTCCCTCTAGCTCTC  999

seq1  TTGCAGCCAGTGAGAACTGTGGAGACCAAGTAGAGGGGAAGCACAAGAAT  1050
       ||||| ||||||| ||||| ||||||||||||||||| ||||||   ||
seq2  -TGCAG-CAGTGAG-ACTGT-GAGACCAAGTAGAGGGG-AGCACA--GAT  1042

seq1  AAGGAAAAATATTTTTATTCTCAATTTTCCATGTTTATAGACCTCA-CAC  1099
      |    ||||||||||   |||||  ||| ||||||||||||||||| |||
seq2  A---GAAAATATTTT--ATCTCA--TTTTCATGTTTATAGACCTCACCAC  1085

seq1  ACAAAAGCAAAA  1111
      ||||||||||||
seq2  ACAAAAGCAAAA  1097

seq1: chr2_76601667_76602814
seq2: B6Ng01-293E11.g_67_1213 (reverse)

seq1  AAGAGTTT---CAGTATGACCTTTGC-ACCAAGTATATGGGATGTTTAGT  46
      ||||||||   |||||||||  |||| |||||||||||  ||||  ||||
seq2  AAGAGTTTTTCCAGTATGAC--TTGCAACCAAGTATAT--GATG--TAGT  44

seq1  TCAACATGTTGAAAATGAAGTATAAG-ATGAAGAAACTAATAAGTTTTGT  95
       ||||||| ||||| ||||||||||| ||| || ||||| ||||||| ||
seq2  CCAACATG-TGAAATTGAAGTATAAGAATGGAGGAACTATTAAGTTTGGT  93

seq1  CTGA-GAGAGATATTCACTGTACTCTTGGGGTTTCAGGTTTCACAAATCA  144
      |||| |||||||| ||||||||||| |||||||||||| ||||| |||||
seq2  CTGAGGAGAGATAATCACTGTACTC-TGGGGTTTCAGG-TTCAC-AATCA  140

seq1  AGTCCCTT-CCGGTGGATTATAATCATACTGATCTCATGACCTTAGTAAA  193
      |||||||| |||||||| ||||||||||||||||||||||||||||| ||
seq2  AGTCCCTTCCCGGTGGAATATAATCATACTGATCTCATGACCTTAGT-AA  189

seq1  CTAGAGGGCTGCAATCAAAGGGGAGAAGAACGGAGATTG-CTTACTGAGA  242
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTAGAGGGCTGCAATCAAAGGGGAGAAGAACGGAGATTGCCTTACTGAGA  239

seq1  GGATCTGATGCAAGCACA-GGTTTGGGGATGTCTGTCGGGACACCAGGGC  291
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGATCTGATGCAAGCACAGGGTTTGGGGATGTCTGTCGGGACACCAGGGC  289

seq1  CATATTCATTGACAGCAGTTACTCGGAAGAAATACTCGTTCCCAGGGACA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCATTGACAGCAGTTACTCGGAAGAAATACTCGTTCCCAGGGACA  339

seq1  AGGTTGGTTACATTG-AAGCTTGTTTTCTTCACTTCAGGGGTAACTGTTG  390
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGTTGGTTACATTGAAAGCTTGTTTTCTTCACTTCAGGGGTAACTGTTG  389

seq1  ACCATGTTTTTCTTTCTGCCTCACGTTTCTCCACAATATAATGTGTCACT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTTTTTCTTTCTGCCTCACGTTTCTCCACAATATAATGTGTCACT  439

seq1  TGGCTTCCACCATCATTTTCAGGAGGTGCCCAGGACACGTGACATGATGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCCACCATCATTTTCAGGAGGTGCCCAGGACACGTGACATGATGT  489

seq1  TTTAGTGACATCTGAAACTTTTAAATCAGCCACAGGTCCAGGAGTATCTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGACATCTGAAACTTTTAAATCAGCCACAGGTCCAGGAGTATCTG  539

seq1  TAAAGATCCACAGACTCAGAACATATGTCCCATAAGCATTCTTATTAACT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATCCACAGACTCAGAACATATGTCCCATAAGCATTCTTATTAACT  589

seq1  TATTTGATTTTGAAGCAGAAAAAAAAAAGCACTTGGATAACGCACCTAGT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGATTTTGAAGCAGAAAAAAAAAAGCACTTGGATAACGCACCTAGT  639

seq1  ACTTTGACATTCACAAAAACAGCCTTTTCTCCTGCTGGGTTCACAAGGGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGACATTCACAAAAACAGCCTTTTCTCCTGCTGGGTTCACAAGGGT  689

seq1  CAGGGAGTATTTTCCAGAGTCATCACGGGTAGAGTTGGGGATGACAAGGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGTATTTTCCAGAGTCATCACGGGTAGAGTTGGGGATGACAAGGA  739

seq1  AGGCCATAGTGTCAACTAGATCGACTTGTCCTTTTCTGACCACATTATCA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATAGTGTCAACTAGATCGACTTGTCCTTTTCTGACCACATTATCA  789

seq1  ATGCCCACTTTGCGCCATGTGACTTTGGGGGCAGGTCGTCCTCTCACTAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCACTTTGCGCCATGTGACTTTGGGGGCAGGTCGTCCTCTCACTAT  839

seq1  TGCGAATAGTCGAATAGGGCAGCCAGCTCTCACTACGACCAGTTTTCTCA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGAATAGTCGAATAGGGCAGCCAGCTCTCACTACGACCAGTTTTCTCA  889

seq1  TGCTGGCATCCAAGTCAATCTCTGGAGGCTCTGCAAACGACACAAAAGAC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCATCCAAGTCAATCTCTGGAGGCTCTGCAAACGACACAAAAGAC  939

seq1  ATCAGCCGACTCTTGAGACACGAGGAAGCCCATGACCGTGAGAATGCATG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCCGACTCTTGAGACACGAGGAAGCCCATGACCGTGAGAATGCATG  989

seq1  CAGATGACTATCTACCACCACAAAAGGGCCTCACCTAGGATTTCTTTAGG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGACTATCTACCACCACAAAAGGGCCTCACCTAGGATTTCTTTAGG  1039

seq1  TTTGATGGCTTCCTTTAGCTCTGCAGGGCGCCCAATGCCAACTTGATTCT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGGCTTCCTTTAGCTCTGCAGGGCGCCCAATGCCAACTTGATTCT  1089

seq1  GGGCACACACCCTGAACTCGTACTCCTGGTTCTCATCCAAGCTGGTGACT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACACACCCTGAACTCGTACTCCTGGTTCTCATCCAAGCTGGTGACT  1139

seq1  GTGAATTC  1148
      ||||||||
seq2  GTGAATTC  1147