BAC Information

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BAC

Clone NameB6Ng01-293O16
Chromosome2 (Build37)
Map Location 99,753,913 - 99,754,925
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621386
Downstream geneLOC668702, LOC100042907, LOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-293O16.bB6Ng01-293O16.g
ACCGA090180GA090181
length1,0201,040
definitionB6Ng01-293O16.b B6Ng01-293O16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaattgtctaaagaggagaattaagacttagaaccagttttat
atatgatgcagctatttaaattacctgagaggtaatttcaaataacaatg
gttaatacgttagagactcaatgaaaacagacagcattcaagaacagatg
agggatgtaaacatagacatggaaattcaaagtgctgaagttgaataggt
ctgattatacaaccttcttaccaaattagctgtgaaaattagcataatgg
tatctaggaaaaaatgagcaatattcataaggactttgctgatactttca
ttactacagtttaataggtaataccattttacccttctgacaagtaaaaa
accaattgctaccaggagtacacagatatatatgggcataattcaagcta
aatcattccgtggttaccaattccacctgtttcatattgaagagatgtac
gtgtacttaagctgtacacattgattgtatccacacttagatatttgatc
catttttacaataaacttgatgttacaaataaacttacataatgtatatt
ataacaagaaatccgttttctacacacattatgtgaaacattaaggagag
gccacaaatctgcaattagattgaaaaacaaaacaaaacactgtctgccc
tctgaaagacccaacaaacagctgaaagagtcagaggcagatatttgtac
ccaaccaatggaccaaagcagctgatccctgaagaccaaaagaatctgag
gagaagggcgatcctgcaggaaaaccagcagtctcaattaatctggatcc
ccaagatctctcaaaaactggaccacaaaacagacagcatacaccagctg
atgtgaaacctccaacacacaaacattagaggacttctgggtctgtgttc
attcagagatgatgcacctaaccctcaagagactagaggacacagggagt
tcggtcagtgggggtggggaggtgggagcatccatgtggagacaagggtt
gggatttaggggggaagggt

gaattcctcctgcatctagcagggtgtgattgagcatgcagagattgcct
taagtctggtgtgagtgcttcttgagggacagcctactctattgagcaat
tttcctacagatcataatgaagatggattttcatacaataatattattta
agtaaattaatatttcacaaaattccttatttgatttaagtagttttaag
aagttagtgtatttgatagaaaatttaagtacatagcttaaattgctttg
ccagaaaagtataataaagttagaattatgagtagactgtgtcccctccc
ttgtagaatagtgtggaatacataggttagaagaggacttcagtgagttt
tgttgtgtttcaagcaggtaattgtactagcaatacaaaagccttggaac
aagttaatgttcaagaaaaacatttattctagattgggtgtctgagtgcc
tggatttggggatctagagatatctttatttacatcagtgtgcaccatga
aaagacagggttatgaataaagagtaaataattctattatgagaataaga
aaagagaatagatggttagtcagtgtagctaaacaacatttgaaaactat
gttgtaaaatagaggatgatctatcatttctgggttaataagaattgtcg
tcagcaaagtgtaggaaaaaatgctattatagactagcttgtttaagttc
tgttaagcaatgacaaaagaattattgctttgggattataataaagttga
agagaaaaagatagatgggaaatgtttagtcaggtgtgagtttcaaaaga
agaattcataatcaataatcctgctgcaatttctttttttttttttgtaa
tgactataattttttttctttccattttttattaggtatttagctcattt
acattcaatgctataccaaagtccccataccaccacccccactcccctac
cggcctactcccctattggccttgcgttccctggtctgggactataagtt
tgagtgtccaatggactccttgctagtgttggcgacttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_99753913_99754925
seq2: B6Ng01-293O16.b_48_1067

seq1  GAATTCAAAATTGTCTAAAGAGGAGAATTAAGACTTAGAACCAGTTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATTGTCTAAAGAGGAGAATTAAGACTTAGAACCAGTTTTAT  50

seq1  ATATGATGCAGCTATTTAAATTACCTGAGAGGTAATTTCAAATAACAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGCAGCTATTTAAATTACCTGAGAGGTAATTTCAAATAACAATG  100

seq1  GTTAATACGTTAGAGACTCAATGAAAACAGACAGCATTCAAGAACAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATACGTTAGAGACTCAATGAAAACAGACAGCATTCAAGAACAGATG  150

seq1  AGGGATGTAAACATAGACATGGAAATTCAAAGTGCTGAAGTTGAATAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGTAAACATAGACATGGAAATTCAAAGTGCTGAAGTTGAATAGGT  200

seq1  CTGATTATACAACCTTCTTACCAAATTAGCTGTGAAAATTAGCATAATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTATACAACCTTCTTACCAAATTAGCTGTGAAAATTAGCATAATGG  250

seq1  TATCTAGGAAAAAATGAGCAATATTCATAAGGACTTTGCTGATACTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGGAAAAAATGAGCAATATTCATAAGGACTTTGCTGATACTTTCA  300

seq1  TTACTACAGTTTAATAGGTAATACCATTTTACCCTTCTGACAAGTAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACAGTTTAATAGGTAATACCATTTTACCCTTCTGACAAGTAAAAA  350

seq1  ACCAATTGCTACCAGGAGTACACAGATATATATGGGCATAATTCAAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTGCTACCAGGAGTACACAGATATATATGGGCATAATTCAAGCTA  400

seq1  AATCATTCCGTGGTTACCAATTCCACCTGTTTCATATTGAAGAGATGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTCCGTGGTTACCAATTCCACCTGTTTCATATTGAAGAGATGTAC  450

seq1  GTGTACTTAAGCTGTACACATTGATTGTATCCACACTTAGATATTTGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTTAAGCTGTACACATTGATTGTATCCACACTTAGATATTTGATC  500

seq1  CATTTTTACAATAAACTTGATGTTACAAATAAACTTACATAATGTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTACAATAAACTTGATGTTACAAATAAACTTACATAATGTATATT  550

seq1  ATAACAAGAAATCCGTTTTCTACACACATTATGTGAAACATTAAGGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAGAAATCCGTTTTCTACACACATTATGTGAAACATTAAGGAGAG  600

seq1  GCCACAAATCTGCAATTAGATTGAAAAACAAAACAAAACACTGTCTGCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAAATCTGCAATTAGATTGAAAAACAAAACAAAACACTGTCTGCCC  650

seq1  TCTGAAAGACCCAACAAACAGCTGAAAGAGTCAGAGGCAGATATTTGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAGACCCAACAAACAGCTGAAAGAGTCAGAGGCAGATATTTGTAC  700

seq1  CCAACCAATGGACCAAAGCAGCTGATCCCTGAAGACCAAAAGAATCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAATGGACCAAAGCAGCTGATCCCTGAAGACCAAAAGAATCTGAG  750

seq1  GAGAAGGGCGATCCTGCAGGAAAACCAGCAGTCTCAATTAATCTGGATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGGCGATCCTGCAGGAAAACCAGCAGTCTCAATTAATCTGGATCC  800

seq1  CCAAGATCTCTCAAAAACTGGACCACAAAACAGACAGCATACACCAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATCTCTCAAAAACTGGACCACAAAACAGACAGCATACACCAGCTG  850

seq1  ATGTGAAACCTCCAACACACAAACATTAGAGGACTTCTGGGTCTGTGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAACCTCCAACACACAAACATTAGAGGACTTCTGGGTCTGTGTTC  900

seq1  ATTCAGAGATGATGCACCTAACCCTCAAGAGACTAGAGGACACAGGGAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAGATGATGCACCTAACCCTCAAGAGACTAGAGGACACAGGGAGT  950

seq1  TCGGTCAGGTGGGGT-GGGAGGT-GGAGCATCCATGTGGAGACA--GGGT  996
      ||||||||  ||||| ||||||| ||||||||||||||||||||  || |
seq2  TCGGTCAGTGGGGGTGGGGAGGTGGGAGCATCCATGTGGAGACAAGGGTT  1000

seq1  GGGAT---AGGGGGAAGGGT  1013
      |||||    |||||||||||
seq2  GGGATTTAGGGGGGAAGGGT  1020


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