BAC Information

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BAC

Clone NameB6Ng01-295O11
Chromosome2 (Build37)
Map Location 117,240,817 - 117,241,968
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433464, Tmco5, LOC100043557, LOC241621, Spred1, LOC624574, 2610510H03Rik, Rasgrp1
Downstream geneThbs1, Fsip1, Gpr176, 1700054M17Rik, Eif2ak4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295O11.bB6Ng01-295O11.g
ACCGA091654GA091655
length1,2011,163
definitionB6Ng01-295O11.b B6Ng01-295O11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcataggtaactagatctttgggcacagaattttgcattaca
gtcgatagcaacagttcaaaccttaatacctgcctccaggttccttcctt
ttctgagttctatcctgacttcctttaatgatgaacagcaatatggaact
gtaaagcaaataaatcctccccctcaacttgtgttttggtcctggtgttt
catcacagcaatagaaaccctaactaaggttggtactagaagtgtggtat
tgctgtgacagatctgactgtattttgggaaagactgctcaaggactttg
ggatgttagattatgaaagacattaagtgtggagagctcagtgggatgtt
ctgtggaagcttggaagataagaatactgagagcaggggaggcgattgaa
ggcctggtttgtaaaattttagagagaagtttaaagactattggggccct
ttgctgttttggactgagatttttgtccttctggtcagctggggctgaaa
agtcagctgtaattaccaagaaacaagcaacactgatgtgaaacctttgc
ctggctgagacaactagtgctggttaactggaggtgagaaattagtggtg
attgagaagagaccagcatcactggggtgaaggcttctaggaagtgtttg
ctcagggtcagctcacacaagctgtgttccagaagcagcagaggttgtag
ctcgagctggcagctgaacttgggagtgttcaagagtcacccggggagtc
ctggttttaaaggcatggaggggtcatggaaaacaaccaaagcttggcat
tgtgagtggtgcagagaggccattggtgaaggtacagcctcagtgacagt
tgaaaggcccaggactgaaggggtcatgcagacaagttgagccttggcac
catgaagagagcctatgagaggatatcagagagagagagagagagagaag
tctggctgcagcagagactctagtaccctgggaggaccatcaagaacaat
agtagtggagccacgggagcctagaagacagctgtgtggtgctgcagagg
gcagagctgaaggagtactcaagctgccttgacggaaccaagaagaatca
ggagtgaacttcccagtaatgtcctagagtagttatggcattggaatttt
gctcgcctggattcaatcgactggctgtttaatctcgtagaaagagaatt
a
gaattcaacagctcttcattaagaaactttctgggcaggtattttgataa
aaaaaccaatactttaagtaaactggtagccttcttaactcctggataat
ttgcaagacaatgcagtaaaaaatagtcaatgcctgttcaatgtagatcg
ctttgattttcaaaaagaaatgcatacatacaaggagcaagaatcacagt
actcaaaggggccacagctatgaagccgtgtgctcattagttaggggcat
aaggttgcatctgtcatttcatatgtgagatgtgaaaggctagcatgcag
caagaaagactcaggtggcagaaagaagactagccaaacgctaagcatta
tggagatgagttccctttaagcctagccacgatatcagtttttacatctc
aaaatagtcacaataatgctttaaaagcagcagaccatgttcatgcgtat
aagataaccaggggggtttgcatacttgctgggtatgcgcatcagtttta
tagacttgatttattcaaaccagggctgaaacttttgcattgaatggtat
cctgagtctccttttcatctgtttttttttctgtgaattgttgtgcgtac
attgagtggtttgttgtgcgcagtaggacagtttctcatctctgcatccg
actgactgcatcctcaccattttgcctaagacttctatttgctcggtttc
cactgagccaatagctggtagagctaggaggtgggtttgattaaagatta
ctctttcattacatgaatgtttcatggaaggcgctgtctatcaggagact
taagatgcactgtcgttgctctgttaaagatactacagacataaaaggtc
attctgtatccgttattacatctgccagactgggatgtgcagaccccggc
ttcccgggctctcgcaatacttttagtccaacttttagcaaagctaagat
ttgcctcacctctgttgatagcatgtacttttcccaatgtaaatggtgaa
aaccttgggttgctgatgtactgaatgcaatcatttcattgattccacac
atagaggatctgaatcttgtcaagaagcaaaagtaagcgtgaacctgcaa
caagctttgtgaacttgttttttgctgctggcctttactacaattacggc
aaagtggtttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_117240817_117241968
seq2: B6Ng01-295O11.g_70_1232 (reverse)

seq1  AGTAAACCAC-TTGCAGTAA-TGTAGTAGAGG-CAGCAGC-AAAAACAAG  46
      |||||||||| |||| |||| ||||||| ||| ||||||| |||||||||
seq2  AGTAAACCACTTTGCCGTAATTGTAGTAAAGGCCAGCAGCAAAAAACAAG  50

seq1  TCAACAAAAGCTTGTTGCA-GTTCACGCCTACTTTTGCTCTTTGACAAGG  95
      |  || ||||||||||||| |||||||| ||||||||||  ||||||| |
seq2  TTCAC-AAAGCTTGTTGCAGGTTCACGCTTACTTTTGCTTCTTGACAA-G  98

seq1  CTCCAGAT-CTCTATGTGT-GAATCAATGAAATGATTGCA-TCAGTACAT  142
       | ||||| |||||||||| |||||||||||||||||||| |||||||||
seq2  ATTCAGATCCTCTATGTGTGGAATCAATGAAATGATTGCATTCAGTACAT  148

seq1  CAGCAA-CCAAGGTTTTCCACA-TTACA-TGGGAAAAGTACATGCTATC-  188
      |||||| |||||||||||  || ||||| |||||||||||||||||||| 
seq2  CAGCAACCCAAGGTTTTCACCATTTACATTGGGAAAAGTACATGCTATCA  198

seq1  ACAGAGGTGAGGCAAATCTTAGCTTTGCT-AAAGTTGGACTAAAAGTATT  237
      ||||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  ACAGAGGTGAGGCAAATCTTAGCTTTGCTAAAAGTTGGACTAAAAGTA-T  247

seq1  TGCGAGAGCCCGGGAAGCC-GGGTCTGCACATCCCAGTCTGGCAGATGTA  286
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGCGAGAGCCCGGGAAGCCGGGGTCTGCACATCCCAGTCTGGCAGATGTA  297

seq1  ATAACGGATACAGAATGACCTTTTATGTCTGTAGTATCTTTAACAGAGCA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACGGATACAGAATGACCTTTTATGTCTGTAGTATCTTTAACAGAGCA  347

seq1  ACGACAGTGCATCTTAAGTCTCCTGATAGACAGCGCCTTCCATGAAACAT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACAGTGCATCTTAAGTCTCCTGATAGACAGCGCCTTCCATGAAACAT  397

seq1  TCATGTAATGAAAGAGTAATCTTTAATCAAACCCACCTCCTAGCTCTACC  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAATGAAAGAGTAATCTTTAATCAAACCCACCTCCTAGCTCTACC  447

seq1  AGCTATTGGCTCAGTGGAAACCGAGCAAATAGAAGTCTTAGGCAAAATGG  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTGGCTCAGTGGAAACCGAGCAAATAGAAGTCTTAGGCAAAATGG  497

seq1  TGAGGATGCAGTCAGTCGGATGCAGAGATGAGAAACTGTCCTACTGCGCA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATGCAGTCAGTCGGATGCAGAGATGAGAAACTGTCCTACTGCGCA  547

seq1  CAACAAACCACTCAATGTACGCACAACAATTCACAGAAAAAAAAACAGAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACCACTCAATGTACGCACAACAATTCACAGAAAAAAAAACAGAT  597

seq1  GAAAAGGAGACTCAGGATACCATTCAATGCAAAAGTTTCAGCCCTGGTTT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAGACTCAGGATACCATTCAATGCAAAAGTTTCAGCCCTGGTTT  647

seq1  GAATAAATCAAGTCTATAAAACTGATGCGCATACCCAGCAAGTATGCAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATCAAGTCTATAAAACTGATGCGCATACCCAGCAAGTATGCAAA  697

seq1  CCCCCCTGGTTATCTTATACGCATGAACATGGTCTGCTGCTTTTAAAGCA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCTGGTTATCTTATACGCATGAACATGGTCTGCTGCTTTTAAAGCA  747

seq1  TTATTGTGACTATTTTGAGATGTAAAAACTGATATCGTGGCTAGGCTTAA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTGACTATTTTGAGATGTAAAAACTGATATCGTGGCTAGGCTTAA  797

seq1  AGGGAACTCATCTCCATAATGCTTAGCGTTTGGCTAGTCTTCTTTCTGCC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAACTCATCTCCATAATGCTTAGCGTTTGGCTAGTCTTCTTTCTGCC  847

seq1  ACCTGAGTCTTTCTTGCTGCATGCTAGCCTTTCACATCTCACATATGAAA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGTCTTTCTTGCTGCATGCTAGCCTTTCACATCTCACATATGAAA  897

seq1  TGACAGATGCAACCTTATGCCCCTAACTAATGAGCACACGGCTTCATAGC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGATGCAACCTTATGCCCCTAACTAATGAGCACACGGCTTCATAGC  947

seq1  TGTGGCCCCTTTGAGTACTGTGATTCTTGCTCCTTGTATGTATGCATTTC  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCCCTTTGAGTACTGTGATTCTTGCTCCTTGTATGTATGCATTTC  997

seq1  TTTTTGAAAATCAAAGCGATCTACATTGAACAGGCATTGACTATTTTTTA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAAATCAAAGCGATCTACATTGAACAGGCATTGACTATTTTTTA  1047

seq1  CTGCATTGTCTTGCAAATTATCCAGGAGTTAAGAAGGCTACCAGTTTACT  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTGTCTTGCAAATTATCCAGGAGTTAAGAAGGCTACCAGTTTACT  1097

seq1  TAAAGTATTGGTTTTTTTATCAAAATACCTGCCCAGAAAGTTTCTTAATG  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATTGGTTTTTTTATCAAAATACCTGCCCAGAAAGTTTCTTAATG  1147

seq1  AAGAGCTGTTGAATTC  1152
      ||||||||||||||||
seq2  AAGAGCTGTTGAATTC  1163