BAC Information

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BAC

Clone NameB6Ng01-296I14
Chromosome2 (Build37)
Map Location 121,526,625 - 121,682,052
singlet/doubletdoublet
Overlap geneFrmd5
Upstream geneStard9, Cdan1, Ttbk2, Ubr1, Tmem62, Rnu3b-ps2, Ccndbp1, Epb4.2, Tgm5, LOC640543, Lcmt2, Adal, Zscan29, D2Ertd435e, Trp53bp1, Mtap1a, Hisppd2a, Ckmt1, Strc, Catsper2, Pdia3, Ell3, Serf2, LOC574418, 2310003F16Rik, Mfap1b, Wdr76p, Mfap1a, Wdr76
Downstream geneCasc4, Mageb3, Ctdspl2, Eif3s1, 4930424G05Rik, B2m, Trim69, 4933406J08Rik, LOC433468, LOC670832, Sord, Duox2, Duoxa2, Duoxa1, Duox1, Shf, Slc28a2, Bambi-ps1, Rp23-357i14.1, Gatm, Spata5l1, AA467197, Slc30a4, Pldn, Sqrdl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296I14.bB6Ng01-296I14.g
ACCGA092124GA092125
length1,167532
definitionB6Ng01-296I14.b B6Ng01-296I14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,526,625 - 121,527,804)(121,681,524 - 121,682,052)
sequence
gaattcctgttctctgctccccacagtctcccttcagcctttgggaacct
actcaacctaggggaaggtcctgggttacttcctgggggttctacatgtt
aacggtgagaatgattcacagttcagaaagccacggtttctgggtttcca
acatccacaacaccccacgggcagaggcgggcagaggtgacctttgacct
tggcttggtttttatcaactagtttgataaaaccagaaaaaaatgagacc
ctggccttaagaagcctagcctgctctttaaaatcttcatctggttctgc
ttcaggtaagtggtagattttgatgtttcatgctccgtttcacccagaat
cccattctccagctgctcaggttcccacggagtgaaaaatgtcggctttc
ccagtgacaggcctgtcattcagctcgttgtatatcactttcataaatgc
agcatccaagggcttctacccatgtgcaccctgttatcagtgatgtgccc
tctcatcgtgcagggagcattcaaactgctcagcagggtaggagacaact
attcaagcggtccttgtagtggctggcgtctccataaataggtgtccact
accatctgaggccccagggacaatctgagtggagatcagtcaggaacagg
gtgtttatgagagctgattttcctagacctgagtcaccaagcaccatcag
gtgtgaactggaatcccaaactactgtggtttctctctctttttcttttt
tttttgagcttcattgggaaaatttgcaagaccaacataggtagaagttt
ctggatttacaaactgagttggctgttgcttagacatcgtcttgattttt
gtttgtttgtttgtttgttttggtcaatacaccaacaccagtcaagtagt
caaacgttaagctatattctcagacacccttctcttttaaactcttggtg
tgtggggtgttgtttgttatgaattacttttaatattcgtgtttcttttt
taaaaactaatggaataggtttcgttttcataggaagtacttttacattg
gtattcctttaaaaaaaaaacttttgatgtttgaagtccatttaacgagt
tgctggagctacattgacaccttgactaatggtaagcttaagcttaccat
gtggcttttcttaaaaa
gaattcaaggccagcctgggctacatagcaagcttcaggccagcaagagc
taattagtgagatcctgtaagaaaagaaaagaaaagaaaagaaaagaaaa
gaaaagaaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaa
ggaaaggaaaggaaaggaaaggaaaggaaaggaaagaaaagaaaagaaaa
gaaaagaaaagaaaagaaaagaaaagaccagatcagataaaacctattca
aattgcctcaaggaaaaggggcgtatattctacaaatgttgacaggttga
aacttgatccaggagtctatcatgatcaaagctctgaaaatcgtgcccct
ctcccggtgcccctctttctctgtgttcctcacattctcccttcttcctc
atagttcttgcctcctcttaactctgcgtcacttactctgggcctgactc
attctgttggtctcttactcttggttagtataagcttacgaccatgttgt
gaggatgatattgtgcatcgtacacattgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_121526625_121527804
seq2: B6Ng01-296I14.b_44_1210

seq1  GAATTCCTGTTCTCTGCTCCCCACAGTCTCCCTTCAGCCTTTGGGAACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTCTCTGCTCCCCACAGTCTCCCTTCAGCCTTTGGGAACCT  50

seq1  ACTCAACCTAGGGGAAGGTCCTGGGTTACTTCCTGGGGGTTCTACATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAACCTAGGGGAAGGTCCTGGGTTACTTCCTGGGGGTTCTACATGTT  100

seq1  AACGGTGAGAATGATTCACAGTTCAGAAAGCCACGGTTTCTGGGTTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGTGAGAATGATTCACAGTTCAGAAAGCCACGGTTTCTGGGTTTCCA  150

seq1  ACATCCACAACACCCCACGGGCAGAGGCGGGCAGAGGTGACCTTTGACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCACAACACCCCACGGGCAGAGGCGGGCAGAGGTGACCTTTGACCT  200

seq1  TGGCTTGGTTTTTATCAACTAGTTTGATAAAACCAGAAAAAAATGAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGGTTTTTATCAACTAGTTTGATAAAACCAGAAAAAAATGAGACC  250

seq1  CTGGCCTTAAGAAGCCTAGCCTGCTCTTTAAAATCTTCATCTGGTTCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTAAGAAGCCTAGCCTGCTCTTTAAAATCTTCATCTGGTTCTGC  300

seq1  TTCAGGTAAGTGGTAGATTTTGATGTTTCATGCTCCGTTTCACCCAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTAAGTGGTAGATTTTGATGTTTCATGCTCCGTTTCACCCAGAAT  350

seq1  CCCATTCTCCAGCTGCTCAGGTTCCCACGGAGTGAAAAATGTCGGCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCTCCAGCTGCTCAGGTTCCCACGGAGTGAAAAATGTCGGCTTTC  400

seq1  CCAGTGACAGGCCTGTCATTCAGCTCGTTGTATATCACTTTCATAAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGACAGGCCTGTCATTCAGCTCGTTGTATATCACTTTCATAAATGC  450

seq1  AGCATCCAAGGGCTTCTACCCATGTGCACCCTGTTATCAGTGATGTGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCCAAGGGCTTCTACCCATGTGCACCCTGTTATCAGTGATGTGCCC  500

seq1  TCTCATCGTGCAGGGAGCATTCAAACTGCTCAGCAGGGTAGGAGACAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCGTGCAGGGAGCATTCAAACTGCTCAGCAGGGTAGGAGACAACT  550

seq1  ATTCAAGCGGTCCTTGTAGTGGCTGGCGTCTCCATAAATAGGTGTCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGCGGTCCTTGTAGTGGCTGGCGTCTCCATAAATAGGTGTCCACT  600

seq1  ACCATCTGAGGCCCCAGGGACAATCTGAGTGGAGATCAGTCAGGAACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCTGAGGCCCCAGGGACAATCTGAGTGGAGATCAGTCAGGAACAGG  650

seq1  GTGTTTATGAGAGCTGATTTTCCTAGACCTGAGTCACCAAGCACCATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATGAGAGCTGATTTTCCTAGACCTGAGTCACCAAGCACCATCAG  700

seq1  GTGTGAACTGGAATCCCAAACTACTGTGGTTTCTCTCTCTTTTTCTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAACTGGAATCCCAAACTACTGTGGTTTCTCTCTCTTTTTCTTTTT  750

seq1  TTTTTGAGCTTCATTGGGAAAATTTGCAAGACCAACATAGGTAGAAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGCTTCATTGGGAAAATTTGCAAGACCAACATAGGTAGAAGTTT  800

seq1  CTGGATTTACAAACTGAGTTGGCTGTTGCTTAGACATCGTCTTGATTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTTACAAACTGAGTTGGCTGTTGCTTAGACATCGTCTTGATTTTT  850

seq1  GTTTGTTTGTTTGTTTGTTTTGGTCAATACACCAACACCAGTCAAGTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTGTTTGTTTTGGTCAATACACCAACACCAGTCAAGTAGT  900

seq1  CAAACGTTAAGCTATATTCTCAGACACCCTTCTCTTTTAAACTCTTGGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGTTAAGCTATATTCTCAGACACCCTTCTCTTTTAAACTCTTGGTG  950

seq1  TGTGGGGTGTTTGTTTTGTTATGAATTACTTTTAATATTCGTGTTTCTTT  1000
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGTGTT--GTTTGTTATGAATTACTTTTAATATTCGTGTTTCTTT  998

seq1  TTTAAAAACTTAATGG-ATAGGTTTGTTTTTCATAGGAAGTACTTTTAAC  1049
      ||||||||| |||||| ||||||||  |||||||||||||||||||| ||
seq2  TTTAAAAAC-TAATGGAATAGGTTTCGTTTTCATAGGAAGTACTTTT-AC  1046

seq1  ATTTGTATTTCCTTTAAAAAAAAACTTTTGATGTTTTAAATTCAATTTAA  1099
      ||| ||||| | || |||||||||||||||||| ||| || || ||||||
seq2  ATTGGTATTCCTTTAAAAAAAAAACTTTTGATG-TTTGAAGTCCATTTAA  1095

seq1  CGAAGTGTCTGAGGCTACATTTTAACACCTTGCCTTATGGTAAGCTTATA  1149
      || |||  |||  ||||||  || |||||||| || |||||||||||| |
seq2  CG-AGTTGCTGGAGCTACA--TTGACACCTTGACTAATGGTAAGCTTA-A  1141

seq1  GTTTATACCATGTGGGTCTTTTCTTATAAAA  1180
      | |  ||||||||||  ||||||||| ||| 
seq2  GCT--TACCATGTGG--CTTTTCTTAAAAA-  1167

seq1: chr2_121681524_121682052
seq2: B6Ng01-296I14.g_67_598 (reverse)

seq1  AAGCAATGTGTACGATGTACAAGATCATCCTCTGAACACGGATGTAAACT  50
      ||||||||||||||||| |||| |||||||||  |||| ||  |||| ||
seq2  AAGCAATGTGTACGATGCACAATATCATCCTCACAACATGGTCGTAAGCT  50

seq1  TCTACTAACCAAGAGTAAGAGACAAACAGAATATTTAAAGGCCCAGAGTA  100
      | ||||||||||||||||||||| ||||||||   |  ||||||||||||
seq2  TATACTAACCAAGAGTAAGAGACCAACAGAATGAGT-CAGGCCCAGAGTA  99

seq1  AGTTATGCAAAAGTTAAGAGGAGGCAAGAACTCTGAGGAAGAAGGGAGAA  150
      ||| | || | ||||||||||||||||||||| |||||||||||||||||
seq2  AGTGACGC-AGAGTTAAGAGGAGGCAAGAACTATGAGGAAGAAGGGAGAA  148

seq1  TCTGAGGAACACAGAGAAAGAGGGGCACCGGGAGAAATGGCTGATTTTCA  200
      | |||||||||||||||||||||||||||||||||   |   ||||||||
seq2  TGTGAGGAACACAGAGAAAGAGGGGCACCGGGAGAGGGGCACGATTTTCA  198

seq1  GAGCTTTGATCATGATAGACTCCTGGATCAAGTTTCAACCTGTTAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAGCTTTGATCATGATAGACTCCTGGATCAAGTTTCAACCTGTCAACATT  248

seq1  TGTAGAATATATGCCCCTTTTCCTTGAGGCAATCTGAATAGGTTTT----  296
      ||||||||||| ||||||||||||||||||||| ||||||||||||    
seq2  TGTAGAATATACGCCCCTTTTCCTTGAGGCAATTTGAATAGGTTTTATCT  298

seq1  -CTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT  345
        |||  |||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCT  348

seq1  TTTCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT  395
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCT  398

seq1  TTCCTTTCCTTTCCTTTCCTTTCCTTTTCTTTTCTTTTCTTTTCTTTTCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCTTTCCTTTCCTTTCCTTTTCTTTTCTTTTCTTTTCTTTTCT  448

seq1  TTTCTTTTCTTTTCTTACAGGATCTCACTAATTAGCTCTTGCTGGCCTGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTTCTTACAGGATCTCACTAATTAGCTCTTGCTGGCCTGA  498

seq1  AGCTTGCTATGTAGCCCAGGCTGGCCTTGAATTC  529
      ||||||||||||||||||||||||||||||||||
seq2  AGCTTGCTATGTAGCCCAGGCTGGCCTTGAATTC  532