BAC Information

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BAC

Clone NameB6Ng01-303D21
Chromosome2 (Build37)
Map Location 50,675,829 - 50,778,627
singlet/doubletdoublet
Overlap geneLOC227885
Upstream gene2310010M24Rik, Lypd6, 2010311D03Rik, LOC666781
Downstream geneRnd3, LOC666802, LOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303D21.bB6Ng01-303D21.g
ACCGA097091GA097092
length1,1431,032
definitionB6Ng01-303D21.b B6Ng01-303D21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,777,466 - 50,778,627)(50,675,829 - 50,676,871)
sequence
gaattctgatacttacgtaagaaaatctgaggttgatgtcccctggaacc
ttgaaacctttgacatctaaaaccacaaagctttggaagatgacccattc
atccttcacacttgctagggggttggctaccagctctaaactcggttata
gctctctccacaatggtattctggggataagcatagggggtgatgctata
aagctgagttttctagaagcagtgaaactagggagacagctatggtcagg
tagtgacacttaagcatcagaagaaaatcagtcacaattatgtgcatgga
caagatggaagtcttggatcccaactcgacatgtggtggtgactagctca
gttttgaagcccaagaacatgggtgggtaaacctcaaaagtgctgtttct
acaaacagaagaaatcaaatatggtggatcagaatgctgagaccaattgc
tctgtgtaaaacttatgaatccctttcttattttgcaggaaggaatcaga
atatccagatgccatggtctgaagagaggtgagcatacagaaggatcttg
cctcacaattgtaggtcataaggattttccaattccttaaatcctattta
ctcaaccaggtaaaggctgcatcgatgatagctggatacacgatctaact
agatacccatgtggagggacaaaataaccaccaatcctctgttagagaga
tctgaagtgaccagatgattagtggaatcacatcacaagaaaagattttt
caaaaagaatttcccagatctgtttccctagttcatagctaactccactg
ctctgaaatgtacaagcaacatgacagaaagcttatatgcaaacattcta
tgggcttaagaggtattcaaaagaagaaggccccaggaggctacccccat
tccagctgagatatcaaatccacacaatgacatgaaagagatttagtgcc
acccatagactattataaatatagatatattcacaccatgcctctaaata
atcattcactctctacatgatactcagatttctgactgatcatagagagc
agatgttaaataaaacagtagtgtccccactggtgagcttattctgcgga
tcgtacttgttaaatagcctatgccatgcagtgacagctgttg

gaattcttttgcagagtaatagtgaccagaaatattgagtaaaaatacaa
tacaggcaattttttaataatatttttattctttgaaaattttgcataca
tatataaaatatcttgaatttatctaccttttccctctaactcactatgg
ggcctcaatatatctctttctcaaatttgtgccaacaaggacaaactgtg
ctgtggtgatttttctcttctgctaagaacagactgaatgatttggaatt
ttataagaatataatagcgattaatttgtagataaggaacattcaggtct
gcattttaatgttcaataccatggcacattcacataaagatttccttgaa
acagtcgttatttccctaagaatttctgacccccccttctctacaaagtg
tccacaaacttccaaagggaaaagctaatgctattgtgcatcccgccccc
cttgggttaggtgtccttttttagatgaccaggcattatgtcaagcctgg
tcatcaagttgttcttcatttgtccctggctgagtgattctttggagagg
ttagttagactaaaaatatgaagccttgaaatgaaatcatctttcaaagg
gagacaaaatgtcagtatcttgtcaaatctgatttcccaaatcagatatc
agaaagaaattttttttttactgatgtcttttttttttttttttgaacac
cacatcatgatctgcaacacaactttagaatagcagtgaacctgaaaggg
ttcataggaacacatggcttagaaatcagtgccctgttgatatctatttt
tccatatatctatctccctacatatacctacatagatacatatagatata
gatatgcctttttctttaaaggttataaccacaggttattaaaatataaa
cataccttgtaattgataggtggtgttgatacagaacaaacttctgttcc
ttactatgtagtaaatttagctatttgatattttgatgatgagaaagaaa
aagagcacaaaaatttgggccagcagaaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_50777466_50778627
seq2: B6Ng01-303D21.b_43_1185 (reverse)

seq1  CAACAGCTGTCACTTCCAATGCCCATAAGCTTATTTTAACAAAGGTACCT  50
      |||||||||||||| |  |||  |||| |||   ||||||||  ||| | 
seq2  CAACAGCTGTCACTGC--ATG-GCATAGGCT--ATTTAACAA--GTA-CG  42

seq1  ATCTGCCAGATTAGCTCA-CAGTGGGGACACTACCTGTTTTATTTAACAT  99
      ||| ||   || |||||| |||||||||||||| ||||||||||||||||
seq2  ATCCGCAGAATAAGCTCACCAGTGGGGACACTA-CTGTTTTATTTAACAT  91

seq1  CTTGGCTCTCTATGATCAAGTTCAGAAATCTGAGTATTCATTGTAGAGGA  149
      ||  ||||||||||||||   ||||||||||||||| ||| |||||| ||
seq2  CT--GCTCTCTATGATCA--GTCAGAAATCTGAGTA-TCA-TGTAGA-GA  134

seq1  GTGAATGATTTATTTAGAGGCATGGTGGTGAATATTATCTATATTTTATA  199
      |||||||| ||||||||||||||||| ||||||| |||||||| ||||||
seq2  GTGAATGA-TTATTTAGAGGCATGGT-GTGAATA-TATCTATA-TTTATA  180

seq1  ATAGTCTATGGGTGGCACTAAATCTCTTTCATGTCATTGTGTGGATTTGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTATGGGTGGCACTAAATCTCTTTCATGTCATTGTGTGGATTTGA  230

seq1  TATCTCAGCTGGAATGGGGGTAGCCTCCTGGGGCCTTCTTCTTTTGAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGCTGGAATGGGGGTAGCCTCCTGGGGCCTTCTTCTTTTGAATA  280

seq1  CCTCTTAAGCCCATAGAATGTTTGCATATAAGCTTTCTGTCATGTTGCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTAAGCCCATAGAATGTTTGCATATAAGCTTTCTGTCATGTTGCTT  330

seq1  GTACATTTCAGAGCAGTGGAGTTAGCTATGAACTAGGGAAACAGATCTGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTCAGAGCAGTGGAGTTAGCTATGAACTAGGGAAACAGATCTGG  380

seq1  GAAATTCTTTTTGAAAAATCTTTTCTTGTGATGTGATTCCACTAATCATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTTTTTGAAAAATCTTTTCTTGTGATGTGATTCCACTAATCATC  430

seq1  TGGTCACTTCAGATCTCTCTAACAGAGGATTGGTGGTTATTTTGTCCCTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACTTCAGATCTCTCTAACAGAGGATTGGTGGTTATTTTGTCCCTC  480

seq1  CACATGGGTATCTAGTTAGATCGTGTATCCAGCTATCATCGATGCAGCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGGTATCTAGTTAGATCGTGTATCCAGCTATCATCGATGCAGCCT  530

seq1  TTACCTGGTTGAGTAAATAGGATTTAAGGAATTGGAAAATCCTTATGACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGGTTGAGTAAATAGGATTTAAGGAATTGGAAAATCCTTATGACC  580

seq1  TACAATTGTGAGGCAAGATCCTTCTGTATGCTCACCTCTCTTCAGACCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTGTGAGGCAAGATCCTTCTGTATGCTCACCTCTCTTCAGACCAT  630

seq1  GGCATCTGGATATTCTGATTCCTTCCTGCAAAATAAGAAAGGGATTCATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTGGATATTCTGATTCCTTCCTGCAAAATAAGAAAGGGATTCATA  680

seq1  AGTTTTACACAGAGCAATTGGTCTCAGCATTCTGATCCACCATATTTGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTACACAGAGCAATTGGTCTCAGCATTCTGATCCACCATATTTGAT  730

seq1  TTCTTCTGTTTGTAGAAACAGCACTTTTGAGGTTTACCCACCCATGTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGTTTGTAGAAACAGCACTTTTGAGGTTTACCCACCCATGTTCT  780

seq1  TGGGCTTCAAAACTGAGCTAGTCACCACCACATGTCGAGTTGGGATCCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTCAAAACTGAGCTAGTCACCACCACATGTCGAGTTGGGATCCAA  830

seq1  GACTTCCATCTTGTCCATGCACATAATTGTGACTGATTTTCTTCTGATGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCATCTTGTCCATGCACATAATTGTGACTGATTTTCTTCTGATGC  880

seq1  TTAAGTGTCACTACCTGACCATAGCTGTCTCCCTAGTTTCACTGCTTCTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTCACTACCTGACCATAGCTGTCTCCCTAGTTTCACTGCTTCTA  930

seq1  GAAAACTCAGCTTTATAGCATCACCCCCTATGCTTATCCCCAGAATACCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTCAGCTTTATAGCATCACCCCCTATGCTTATCCCCAGAATACCA  980

seq1  TTGTGGAGAGAGCTATAACCGAGTTTAGAGCTGGTAGCCAACCCCCTAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGAGAGAGCTATAACCGAGTTTAGAGCTGGTAGCCAACCCCCTAGC  1030

seq1  AAGTGTGAAGGATGAATGGGTCATCTTCCAAAGCTTTGTGGTTTTAGATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGAAGGATGAATGGGTCATCTTCCAAAGCTTTGTGGTTTTAGATG  1080

seq1  TCAAAGGTTTCAAGGTTCCAGGGGACATCAACCTCAGATTTTCTTACGTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTTTCAAGGTTCCAGGGGACATCAACCTCAGATTTTCTTACGTA  1130

seq1  AGTATCAGAATTC  1162
      |||||||||||||
seq2  AGTATCAGAATTC  1143


seq1: chr2_50675829_50676871
seq2: B6Ng01-303D21.g_65_1096

seq1  GAATTCTTTTGCAGAGTAATAGTGACCAGAAATATTGAGTAAAAATACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGCAGAGTAATAGTGACCAGAAATATTGAGTAAAAATACAA  50

seq1  TACAGGCAATTTTTTAATAATATTTTTATTCTTTGAAAATTTTGCATACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCAATTTTTTAATAATATTTTTATTCTTTGAAAATTTTGCATACA  100

seq1  TATATAAAATATCTTGAATTTATCTACCTTTTCCCTCTAACTCACTATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAAATATCTTGAATTTATCTACCTTTTCCCTCTAACTCACTATGG  150

seq1  GGCCTCAATATATCTCTTTCTCAAATTTGTGCCAACAAGGACAAACTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAATATATCTCTTTCTCAAATTTGTGCCAACAAGGACAAACTGTG  200

seq1  CTGTGGTGATTTTTCTCTTCTGCTAAGAACAGACTGAATGATTTGGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTGATTTTTCTCTTCTGCTAAGAACAGACTGAATGATTTGGAATT  250

seq1  TTATAAGAATATAATAGCGATTAATTTGTAGATAAGGAACATTCAGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGAATATAATAGCGATTAATTTGTAGATAAGGAACATTCAGGTCT  300

seq1  GCATTTTAATGTTCAATACCATGGCACATTCACATAAAGATTTCCTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTAATGTTCAATACCATGGCACATTCACATAAAGATTTCCTTGAA  350

seq1  ACAGTCGTTATTTCCCTAAGAATTTCTGACCCCCCCTTCTCTACAAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCGTTATTTCCCTAAGAATTTCTGACCCCCCCTTCTCTACAAAGTG  400

seq1  TCCACAAACTTCCAAAGGGAAAAGCTAATGCTATTGTGCATCCCGCCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAACTTCCAAAGGGAAAAGCTAATGCTATTGTGCATCCCGCCCCC  450

seq1  CTTGGGTTAGGTGTCCTTTTTTAGATGACCAGGCATTATGTCAAGCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTAGGTGTCCTTTTTTAGATGACCAGGCATTATGTCAAGCCTGG  500

seq1  TCATCAAGTTGTTCTTCATTTGTCCCTGGCTGAGTGATTCTTTGGAGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAGTTGTTCTTCATTTGTCCCTGGCTGAGTGATTCTTTGGAGAGG  550

seq1  TTAGTTAGACTAAAAATATGAAGCCTTGAAATGAAATCATCTTTCAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAGACTAAAAATATGAAGCCTTGAAATGAAATCATCTTTCAAAGG  600

seq1  GAGACAAAATGTCAGTATCTTGTCAAATCTGATTTCCCAAATCAGATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAAATGTCAGTATCTTGTCAAATCTGATTTCCCAAATCAGATATC  650

seq1  AGAAAGAAATTTTTTTTTTACTGATGTCTTTTTTTTTTTTTTTTGAACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAATTTTTTTTTTACTGATGTCTTTTTTTTTTTTTTTTGAACAC  700

seq1  CACATCATGATCTGCAACACAACTTTAGAATAGCAGTGAACCTGAAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCATGATCTGCAACACAACTTTAGAATAGCAGTGAACCTGAAAGGG  750

seq1  TTCATAGGAACACATGGCTTAGAAATCAGTGCCCTGTTGATATCTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGGAACACATGGCTTAGAAATCAGTGCCCTGTTGATATCTATTTT  800

seq1  TCCATATATCTATCTCCCTACATATACCTACATAGATACATATAGATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATATCTATCTCCCTACATATACCTACATAGATACATATAGATATA  850

seq1  GATATGCCTTTTTCTTTAAAGGTTATAACCACAGGTTATTAAAATATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGCCTTTTTCTTTAAAGGTTATAACCACAGGTTATTAAAATATAAA  900

seq1  CATACCTTGTAATTGATAGGTGGTGTTGATACAGAACAAACTTCTTGTTC  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CATACCTTGTAATTGATAGGTGGTGTTGATACAGAACAAACTTC-TGTTC  949

seq1  CTTACTATGTAGTAAATTTAGCTAATTTTGATATTTTTGATGATGAGAAA  1000
      ||||||||||||||||||||||||  ||||||| ||||||||||||| ||
seq2  CTTACTATGTAGTAAATTTAGCTA--TTTGATA-TTTTGATGATGAG-AA  995

seq1  AGAAAAAGGAAGCCACAAAAATTTTGGCCAGCAAGGAAAGGTG  1043
      ||||||||  || ||||||||||| ||||||||    ||||||
seq2  AGAAAAAG--AG-CACAAAAATTTGGGCCAGCA---GAAGGTG  1032


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