BAC Information

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BAC

Clone NameB6Ng01-303G01
Chromosome2 (Build37)
Map Location 86,117,071 - 86,118,197
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992
Downstream geneOlfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303G01.bB6Ng01-303G01.g
ACCGA097192GA097193
length1,1261,178
definitionB6Ng01-303G01.b B6Ng01-303G01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctcttacttgccttgtggtttgtatagtcagattaatagaat
agattaccattcttcttaaaaattcaggtgcagtctttatttcctccagg
ccatagactgtcaaatgtaatctcacaatcatgtaatcaattaaatattg
tgtactaataatgtagctaggatcaataagtgtggtttgtcttgttacaa
taacttccttagacaagcattagctcagccaactaaagtgaaaatgatta
ctgtacaattctctcttatcttactctccatttcatttttaatagagaaa
acccaaaattagcataaagctaatgtgatcataatctattcccaaaaata
cacctgatttaaatcaatatccaaagaggtcaaatttttaattcaatatt
ctttatttctttcctcactgttgaaataaattttataaagcagttaatta
tttaaatttttattatttgatttgttaatgatgtataatttaaaattttt
caaaatatttcaattataacaaatttatttttgtaataaatgtaaataat
tagaaaagatttagtaacagtgaatttgatttaaccctaataaatttgag
ttcctttcttactgtattctgtttgacctcaataggaatgtgtggattca
taagcatgattttaagaataataacaactaaagtattctatgatgttttg
tgatgtattggaaagttataactggaaaaactaggattttactagaagat
acaattctttagtttgaaacaggggctatatgtatctagcttattgaagt
tagaagcaatctaaaaatctacattttggtattccattcagtattttact
tttctgatttttaagatgggatgtgaggaaaaggtggtgttcatagctgc
tggggcactctatacattcttttgaattttacagttatatttaatgtgtt
tatttgtgtgtggaggctacataaataccatgagtgggtatgtaggtcac
aggcaatttgtagatttctgtgtattctaccatacacattaagggagtaa
cgcaaggcttgtcacttcttgggaatccagtgtctactgctgagaacttt
cttgcagccgatttccctcttctaaa
gaattcattattctgttgaaggatatctgggttctttccagcttctgcgt
attataaataaggctgctatgacacaatagagcatatgtccttgttatat
gttggagcatcttttggctatatgcccaggagtggaatagctgggtcctc
aggcagtgccagactgatttccagaggggttgtacaagcttgcaatctca
ccaacaatggaggagtgttcttctttctccacatccacaccagcatctgc
tgtcacctaagttattgattttagccattctgactgctgtgaggtagaat
ctcagggttgcttttgatttgcatccccctgatgattaaggatattaaca
attctttaggtgcttctcaccctttcggtattcctcagttgagagttttt
tgtttagctctgtaccccatttttagtagggttatttggttctctggagt
ctaacttcttgattttttttgtatatatttggtattatccctctatctga
tgaagggttcaaaatgaccttttccccatctgttggttgacattttgtcc
tattaacagtgtcctttgctttaaagaagctttgaaattttatgaggtcc
cattagtcaattgttgatcttagaacataagctatttgtattcagctcac
gaacctttccgctgtgcccatgtgttccaggcttttcccttccttctcct
ctattattttcaatgtatctggttttatgtggcggtccttgatccacttg
aacttgagctttgtacaaggaaataagaaagaagagtgcaaatggaatgc
tcatttttattgtaaattatttgtaaaactgagacatggaattaactaga
taccatcaattacacacacacaggcacagacacacacagacacacacaca
cacacacacacacacacacacacacacagagagagagagagagagagaga
gagagagagagagagagagagagagatcctgagaactacactcagtccaa
gaaggcatgacatccctaatattttgttgaaaaatgccatgaaacctaga
attttttggtttagtatgtaattactttattgtagatagctatttaattg
gtattaacttcatgtaacctatatatcatcgtggctctaataaaatatat
ttttaaaaggtaataattaatttgtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86117071_86118197
seq2: B6Ng01-303G01.b_45_1170

seq1  GAATTCACCTCTTACTTGCCTTGTGGTTTGTATAGTCAGATTAATAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTCTTACTTGCCTTGTGGTTTGTATAGTCAGATTAATAGAAT  50

seq1  AGATTACCATTCTTCTTAAAAATTCAGGTGCAGTCTTTATTTCCTCCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACCATTCTTCTTAAAAATTCAGGTGCAGTCTTTATTTCCTCCAGG  100

seq1  CCATAGACTGTCAAATGTAATCTCACAATCATGTAATCAATTAAATATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGACTGTCAAATGTAATCTCACAATCATGTAATCAATTAAATATTG  150

seq1  TGTACTAATAATGTAGCTAGGATCAATAAGTGTGGTTTGTCTTGTTACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTAATAATGTAGCTAGGATCAATAAGTGTGGTTTGTCTTGTTACAA  200

seq1  TAACTTCCTTAGACAAGCATTAGCTCAGCCAACTAAAGTGAAAATGATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCCTTAGACAAGCATTAGCTCAGCCAACTAAAGTGAAAATGATTA  250

seq1  CTGTACAATTCTCTCTTATCTTACTCTCCATTTCATTTTTAATAGAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACAATTCTCTCTTATCTTACTCTCCATTTCATTTTTAATAGAGAAA  300

seq1  ACCCAAAATTAGCATAAAGCTAATGTGATCATAATCTATTCCCAAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAATTAGCATAAAGCTAATGTGATCATAATCTATTCCCAAAAATA  350

seq1  CACCTGATTTAAATCAATATCCAAAGAGGTCAAATTTTTAATTCAATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGATTTAAATCAATATCCAAAGAGGTCAAATTTTTAATTCAATATT  400

seq1  CTTTATTTCTTTCCTCACTGTTGAAATAAATTTTATAAAGCAGTTAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTCTTTCCTCACTGTTGAAATAAATTTTATAAAGCAGTTAATTA  450

seq1  TTTAAATTTTTATTATTTGATTTGTTAATGATGTATAATTTAAAATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTTATTATTTGATTTGTTAATGATGTATAATTTAAAATTTTT  500

seq1  CAAAATATTTCAATTATAACAAATTTATTTTTGTAATAAATGTAAATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATTTCAATTATAACAAATTTATTTTTGTAATAAATGTAAATAAT  550

seq1  TAGAAAAGATTTAGTAACAGTGAATTTGATTTAACCCTAATAAATTTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGATTTAGTAACAGTGAATTTGATTTAACCCTAATAAATTTGAG  600

seq1  TTCCTTTCTTACTGTATTCTGTTTGACCTCAATAGGAATGTGTGGATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTTACTGTATTCTGTTTGACCTCAATAGGAATGTGTGGATTCA  650

seq1  TAAGCATGATTTTAAGAATAATAACAACTAAAGTATTCTATGATGTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATGATTTTAAGAATAATAACAACTAAAGTATTCTATGATGTTTTG  700

seq1  TGATGTATTGGAAAGTTATAACTGGAAAAACTAGGATTTTACTAGAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTATTGGAAAGTTATAACTGGAAAAACTAGGATTTTACTAGAAGAT  750

seq1  ACAATTCTTTAGTTTGAAACAGGGGCTATATGTATCTAGCTTATTGAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTTTAGTTTGAAACAGGGGCTATATGTATCTAGCTTATTGAAGT  800

seq1  TAGAAGCAATCTAAAAATCTACA-TTTGGTATTCCATTCAGTATTTTACT  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGAAGCAATCTAAAAATCTACATTTTGGTATTCCATTCAGTATTTTACT  850

seq1  TTTCTGATTTTTAAGATGGGATGTGAGGAAAAGGTGGTGTTCATAGCTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATTTTTAAGATGGGATGTGAGGAAAAGGTGGTGTTCATAGCTGC  900

seq1  TGGGGCACTCTATACATTCTTTTGAATTTTACAGTTATATTTAATGTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCACTCTATACATTCTTTTGAATTTTACAGTTATATTTAATGTGTT  950

seq1  TATTTGTGTGTGGAGGCTACATAAATACCATGGAGTGGGTATGTAGGTCA  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATTTGTGTGTGGAGGCTACATAAATACCAT-GAGTGGGTATGTAGGTCA  999

seq1  CAGGCAATTTGTAGATTTCTGTGTTTATTTCTACCATACACATTAA-GGA  1048
      ||||||||||||||||||||||||    |||||||||||||||||| |||
seq2  CAGGCAATTTGTAGATTTCTGTGT---ATTCTACCATACACATTAAGGGA  1046

seq1  GTAAACGC-AGGC-TGTCACT--CTGGGTATCCAGTGTCCTTACCTGCTG  1094
      || ||||| |||| |||||||   |||| ||||||||||  || ||||||
seq2  GT-AACGCAAGGCTTGTCACTTCTTGGGAATCCAGTGTC--TA-CTGCTG  1092

seq1  AG-ACTTCTTGGCAGCCCGATTT-CCTCTTCTAAA  1127
      || ||||  | |||| ||||||| |||||||||||
seq2  AGAACTTTCTTGCAG-CCGATTTCCCTCTTCTAAA  1126